Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18220.1 | CDX95295 | AT2G13650.1 | 15299147 |
| AT4G18220.1 | CDY39936 | AT2G13650.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76536 | Canola | plasma membrane | 72.03 | 76.45 |
| Bra021018.1-P | Field mustard | plasma membrane | 96.14 | 75.13 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 90.03 | 71.79 |
| CDX76537 | Canola | plasma membrane | 90.03 | 71.79 |
| CDY08897 | Canola | plasma membrane | 87.78 | 69.82 |
| CDX76538 | Canola | plasma membrane | 87.14 | 69.13 |
| CDX99493 | Canola | plasma membrane | 85.21 | 67.6 |
| CDX78835 | Canola | plasma membrane | 83.92 | 66.75 |
| AT4G18210.1 | Thale cress | plasma membrane | 79.74 | 63.59 |
| AT4G18220.1 | Thale cress | plasma membrane | 78.14 | 62.31 |
| KRH45390 | Soybean | plasma membrane | 48.23 | 46.88 |
| VIT_10s0003g02850.t01 | Wine grape | plasma membrane | 54.34 | 45.68 |
| CDY01525 | Canola | plasma membrane | 53.38 | 43.92 |
| CDX90414 | Canola | plasma membrane | 52.73 | 43.73 |
| CDY08895 | Canola | plasma membrane | 54.98 | 43.29 |
| CDX76540 | Canola | plasma membrane | 54.66 | 42.82 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 40.19 | 41.81 |
| CDY12545 | Canola | plasma membrane | 39.87 | 41.61 |
| KRH46353 | Soybean | plasma membrane | 54.34 | 40.72 |
| KRG98518 | Soybean | plasma membrane | 54.02 | 40.58 |
| VIT_10s0003g02840.t01 | Wine grape | plasma membrane | 54.34 | 38.32 |
| PGSC0003DMT400025116 | Potato | plasma membrane | 46.62 | 37.56 |
| Solyc02g071110.2.1 | Tomato | plasma membrane | 45.34 | 37.2 |
| PGSC0003DMT400025123 | Potato | plasma membrane | 45.66 | 36.22 |
| Solyc02g071060.2.1 | Tomato | plasma membrane | 45.66 | 35.95 |
| PGSC0003DMT400025125 | Potato | plasma membrane | 44.69 | 35.46 |
| Solyc02g071050.2.1 | Tomato | plasma membrane | 43.73 | 35.14 |
| Solyc02g071080.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid, vacuole | 27.97 | 34.94 |
| Solyc03g005810.2.1 | Tomato | endoplasmic reticulum, extracellular, plastid | 26.37 | 33.47 |
| CDY14989 | Canola | plasma membrane | 44.05 | 33.01 |
| CDX71327 | Canola | plasma membrane | 43.73 | 32.69 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 50.48 | 32.64 |
| PGSC0003DMT400025122 | Potato | plasma membrane | 38.26 | 31.57 |
| Solyc02g071100.2.1 | Tomato | nucleus | 37.94 | 31.47 |
| Solyc02g071090.2.1 | Tomato | plasma membrane | 37.62 | 31.2 |
| CDX99494 | Canola | plasma membrane | 50.8 | 30.8 |
| PGSC0003DMT400025118 | Potato | plasma membrane | 38.26 | 30.28 |
| PGSC0003DMT400035010 | Potato | endoplasmic reticulum, peroxisome, plasma membrane | 36.66 | 30.08 |
| PGSC0003DMT400035009 | Potato | endoplasmic reticulum, extracellular | 14.15 | 29.14 |
| CDY54350 | Canola | plasma membrane | 30.87 | 28.92 |
| CDX90136 | Canola | plasma membrane | 32.15 | 28.41 |
| CDX75141 | Canola | plasma membrane | 29.9 | 28.01 |
| CDY35722 | Canola | plasma membrane | 31.83 | 27.97 |
| CDY17197 | Canola | extracellular, plasma membrane | 31.51 | 27.92 |
| CDY27947 | Canola | plasma membrane | 30.87 | 27.51 |
| Solyc03g005820.2.1 | Tomato | plasma membrane | 36.98 | 27.38 |
| CDY15687 | Canola | plasma membrane | 26.37 | 27.06 |
| CDX94594 | Canola | extracellular, plasma membrane | 29.9 | 26.65 |
| CDY72169 | Canola | plasma membrane | 21.54 | 26.48 |
| CDX94595 | Canola | plasma membrane | 29.58 | 26.36 |
| CDY02338 | Canola | plasma membrane | 26.37 | 25.62 |
| CDY09527 | Canola | plasma membrane | 26.05 | 25.31 |
| CDY12422 | Canola | plasma membrane | 30.55 | 25.27 |
| CDY09533 | Canola | plasma membrane | 25.72 | 25.0 |
| CDY16284 | Canola | plasma membrane | 30.23 | 24.93 |
| CDY29741 | Canola | plasma membrane | 29.9 | 24.67 |
| CDX76826 | Canola | cytosol, peroxisome, plasma membrane | 27.65 | 22.69 |
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 27.65 | 22.69 |
| CDY46618 | Canola | plasma membrane | 16.08 | 22.03 |
| CDX90135 | Canola | plasma membrane | 21.86 | 21.05 |
| CDY35721 | Canola | plasma membrane | 21.22 | 20.69 |
| CDY29401 | Canola | plasma membrane | 22.51 | 20.35 |
| CDY29404 | Canola | plasma membrane | 24.76 | 20.21 |
| CDY67986 | Canola | plasma membrane | 24.12 | 20.11 |
| CDY39353 | Canola | plasma membrane | 24.44 | 19.9 |
| CDY22619 | Canola | plasma membrane | 24.12 | 19.89 |
| CDY53149 | Canola | plasma membrane | 24.44 | 19.34 |
| CDX94937 | Canola | plasma membrane | 23.47 | 19.26 |
| CDY64442 | Canola | plasma membrane | 23.79 | 18.93 |
| CDX93469 | Canola | plasma membrane | 23.15 | 18.65 |
| CDY39352 | Canola | plasma membrane | 23.15 | 18.46 |
| CDY29403 | Canola | plasma membrane | 22.51 | 18.18 |
| CDY31805 | Canola | plasma membrane | 25.08 | 17.61 |
| CDX96651 | Canola | plasma membrane | 23.79 | 17.49 |
| CDY63252 | Canola | extracellular | 23.79 | 17.13 |
| CDX73177 | Canola | plasma membrane | 17.04 | 12.53 |
| CDY63702 | Canola | plasma membrane | 23.15 | 9.39 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 0.32 | 0.64 |
Protein Annotations
| MapMan:24.2.1.6 | GO:A0A078F301 | UniProt:A0A078F301 | EnsemblPlants:CDY08900 | ProteinID:CDY08900 | ProteinID:CDY08900.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00000906001 | PFAM:PF16913 | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF17 | InterPro:PUP_plant |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EE6BCB | SEG:seg | : | : |
Description
BnaC08g11300DBnaC08g11300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F301]
Coordinates
chrLK031990:+:360596..361957
Molecular Weight (calculated)
33732.2 Da
IEP (calculated)
8.972
GRAVY (calculated)
0.429
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGDQELQVI GQSVAAILGR LYYDNGGKSK WLATVVKLVG FPVLLPYYLL SIKTHATTHT DSKAASPRNR VLVYVALGVL VGAGCYLYSI GLLYLPVSTF
101: SLICASQLAF NALFSYFLNS QKLTPIILNS LLLLTISSTL LAFNNEESNL KKVTRGQYVT SFICTIGASA GFGLVLSLQQ VAFSKVLKRQ TFSEVMDLII
201: YVNLVASCVS LVGLFASGEW KTLSSEMDSY KESALGLPVV PVLAVIIFHD KMNGLKVISM ILAIWGFTSY VYQHYLDDKN LKKSIGISTE ESSAPSEAEG
301: SSGQKIQTSA S
101: SLICASQLAF NALFSYFLNS QKLTPIILNS LLLLTISSTL LAFNNEESNL KKVTRGQYVT SFICTIGASA GFGLVLSLQQ VAFSKVLKRQ TFSEVMDLII
201: YVNLVASCVS LVGLFASGEW KTLSSEMDSY KESALGLPVV PVLAVIIFHD KMNGLKVISM ILAIWGFTSY VYQHYLDDKN LKKSIGISTE ESSAPSEAEG
301: SSGQKIQTSA S
001: MEITQVIYVN DHNNIEANLT GQEEMNTTME IESSSVPQSK NYKKWLRISI YVFFVLACQA LSTILGRVYY ENGGKSTWMG TLVQLIGFPV LFLFRFFSQT
101: KNPKPTEADF RKFSSFTILG SVYIVTGLLV SANSYMSSVG LLYLPVSTFS LILASQLAFT AFFSYFLNSQ KFTPFIVNSL FLLTISSALL VVNTDSENTA
201: KVSRVKYVIG IICTIGASAG IGLLLSLVQL ILRKVLKKQT FSTVTDLVAY QSLVASCVVL IGLFASGEWK TLTSEMENYK LGKVPYVMTL ASIAISWQVY
301: TIGVVGLIFE SSSVFSNSIT AVGLPIVPVV AVIVFHDKMN ASKIFSIILA IWGFISFVYQ HYLDEKKLKT SHTSPVGDPH LLPAEEGHTN IHSV
101: KNPKPTEADF RKFSSFTILG SVYIVTGLLV SANSYMSSVG LLYLPVSTFS LILASQLAFT AFFSYFLNSQ KFTPFIVNSL FLLTISSALL VVNTDSENTA
201: KVSRVKYVIG IICTIGASAG IGLLLSLVQL ILRKVLKKQT FSTVTDLVAY QSLVASCVVL IGLFASGEWK TLTSEMENYK LGKVPYVMTL ASIAISWQVY
301: TIGVVGLIFE SSSVFSNSIT AVGLPIVPVV AVIVFHDKMN ASKIFSIILA IWGFISFVYQ HYLDEKKLKT SHTSPVGDPH LLPAEEGHTN IHSV
Arabidopsis Description
PUP8Probable purine permease 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.