CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53149	Canola	plasma membrane	86.68	97.71
AT1G57990.1	Thale cress	plasma membrane	73.14	83.08
AT1G57943.1	Thale cress	plasma membrane	72.91	81.16
AT1G57980.1	Thale cress	plasma membrane	71.33	80.2
CDY22619	Canola	plasma membrane	55.08	64.72
CDX94937	Canola	plasma membrane	53.72	62.8
CDX93469	Canola	plasma membrane	53.27	61.14
CDY64442	Canola	plasma membrane	36.79	41.69
CDY63252	Canola	extracellular	37.92	38.89
CDY29404	Canola	plasma membrane	30.02	34.91
CDY39353	Canola	plasma membrane	29.57	34.29
CDY29401	Canola	plasma membrane	26.41	34.01
CDY67986	Canola	plasma membrane	27.77	32.98
CDY12545	Canola	plasma membrane	21.67	32.21
CDY39352	Canola	plasma membrane	27.99	31.79
CDY29403	Canola	plasma membrane	27.54	31.69
CDX96651	Canola	plasma membrane	30.02	31.44
CDY36342	Canola	endoplasmic reticulum, plasma membrane, vacuole	20.99	31.1
CDY54350	Canola	plasma membrane	20.99	28.01
CDX75141	Canola	plasma membrane	20.54	27.41
CDX90414	Canola	plasma membrane	21.9	25.87
CDY01525	Canola	plasma membrane	21.9	25.66
CDX76536	Canola	plasma membrane	16.93	25.6
CDY14989	Canola	plasma membrane	23.7	25.3
CDX76537	Canola	plasma membrane	22.12	25.13
CDY08899	Canola	cytosol, peroxisome, plasma membrane	22.12	25.13
CDY08900	Canola	plasma membrane	17.61	25.08
CDX78835	Canola	plasma membrane	22.12	25.06
CDX71327	Canola	plasma membrane	23.48	25.0
CDX99493	Canola	plasma membrane	22.12	25.0
CDX76538	Canola	plasma membrane	21.9	24.74
CDY08897	Canola	plasma membrane	21.44	24.3
CDY15687	Canola	plasma membrane	16.25	23.76
CDY08895	Canola	plasma membrane	20.99	23.54
CDX76540	Canola	plasma membrane	20.99	23.43
CDX94594	Canola	extracellular, plasma membrane	17.83	22.64
CDX94595	Canola	plasma membrane	17.61	22.35
CDX73177	Canola	plasma membrane	20.99	21.99
CDY17197	Canola	extracellular, plasma membrane	17.16	21.65
CDY46618	Canola	plasma membrane	11.06	21.59
CDY27947	Canola	plasma membrane	16.93	21.49
CDX78833	Canola	cytosol, extracellular, plasma membrane	23.25	21.41
CDY12422	Canola	plasma membrane	17.83	21.01
CDY29741	Canola	plasma membrane	17.83	20.95
CDX90136	Canola	plasma membrane	16.48	20.74
CDY72169	Canola	plasma membrane	11.74	20.55
CDX99494	Canola	plasma membrane	23.7	20.47
CDY16284	Canola	plasma membrane	17.38	20.42
CDY35722	Canola	plasma membrane	16.25	20.34
CDX90135	Canola	plasma membrane	14.67	20.12
CDX76826	Canola	cytosol, peroxisome, plasma membrane	16.7	19.53
CDY35721	Canola	plasma membrane	14.0	19.44
CDY09527	Canola	plasma membrane	14.0	19.38
CDY09533	Canola	plasma membrane	13.77	19.06
CDY02338	Canola	plasma membrane	13.77	19.06
CDY34789	Canola	cytosol, peroxisome, plasma membrane	16.25	19.0
CDY63702	Canola	plasma membrane	30.25	17.47
CDX96650	Canola	cytosol, plasma membrane, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:CDY31805	EnsemblPlantsGene:GSBRNA2T00050485001	GO:A0A078GZ98	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376
PANTHER:PTHR31376:SF34	PFAM:PF16913	ProteinID:CDY31805	ProteinID:CDY31805.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EC70E1	UniProt:A0A078GZ98	MapMan:24.2.1.6	:	:	:

Description

BnaC01g27610DBnaC01g27610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZ98]

Coordinates

chrLK032279:-:433021..434589

Molecular Weight (calculated)

50587.1 Da

IEP (calculated)

8.418

GRAVY (calculated)

0.295

Length

443 amino acids

Sequence
(BLAST)

001: MELDIVKAHF SSSILIKSKI ILLYKISKES ETNLDFKTLQ SLGPEKKKFM EMSEASKQTT RHEESEHLQN PEPDQILSQR RSLIVTQRKW WLSVSLCLFL
101: VVLGDSLVML LLNFFYVQDN REDSDQDLQY TGTWTQALIQ NAAFPILIPL FFIFRSPKQN PETNNTRFLS FRILFLYTSL GVLVAAHSKL FALGKLYANY
201: GVFTLIAAIQ LIFMAIFTAI INRFKFNRWI IISILLTIVI YVFGSPEFGG EPDENEEFYN IQAWLTFAGS VAFALSLCFF QLGFEKLLVK TKRYGNKKVF
301: RMVLEMQICV SFVASVVCLV GLIASGEYKE LKGDSQRFKK GHTYYVLSLV GLALSWQVWA VGLIGLVLYV SGVFGDVVHM CTSPLVALIV VLAFDFMDDD
401: FSWPRIGALI GTTLALGSYF YSMHKKNKKE MMELDRRENS VEV

Best Arabidopsis Sequence Match ( AT1G57943.1 )
(BLAST)

001: MEMSKASKQT TRHEESEHVQ NPEPDQILSP RRSLELKQRK WWISVSLCLF LVLLGDSLVM LLLNFFYVQM KQDRREEYDQ DLQYKGTWTQ ALIQNAAFPI
101: LIPLFFIFPK PKQHLETNNT SFLSLRLFFL YLSLGVLVAA HSKLFALGKL VSNYGIFSLI STTQLIFTAV LTAIINRFKF TRWIIISILL TIVIYVLGTP
201: DFGGQPHDGE EFGYNIQAWL AFSATIAFSL SLCLIQLGFE KLQVKTKRYG NEKVFRMVLE MQICVAFVAS VVCLVGLFAS DEYKELKGDS KRFKKGETYY
301: VLSLVGLALS WQVWAVGMIG LVHYVSGLFG DVVHMCASPF VALFVVLAFD FMDDVFSWPR IGALIGTVLA LGSYFYTLHK RNKKKMAELN QSENNVEV

Arabidopsis Description

PUP17Probable purine permease 17 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFJ4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.