Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94937 | Canola | plasma membrane | 80.11 | 79.68 |
| AT1G09860.1 | Thale cress | plasma membrane | 80.64 | 79.37 |
| CDX93469 | Canola | plasma membrane | 81.17 | 79.27 |
| CDY53149 | Canola | plasma membrane | 63.4 | 60.81 |
| CDY31805 | Canola | plasma membrane | 64.72 | 55.08 |
| CDY64442 | Canola | plasma membrane | 43.77 | 42.2 |
| CDY63252 | Canola | extracellular | 43.24 | 37.73 |
| CDY29404 | Canola | plasma membrane | 33.16 | 32.81 |
| CDY29401 | Canola | plasma membrane | 29.71 | 32.56 |
| CDY39353 | Canola | plasma membrane | 32.63 | 32.2 |
| CDY12545 | Canola | plasma membrane | 25.2 | 31.88 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.2 | 31.77 |
| CDY67986 | Canola | plasma membrane | 31.3 | 31.64 |
| CDY29403 | Canola | plasma membrane | 31.03 | 30.39 |
| CDY39352 | Canola | plasma membrane | 31.03 | 30.0 |
| CDX96651 | Canola | plasma membrane | 32.63 | 29.08 |
| CDX75141 | Canola | plasma membrane | 25.46 | 28.92 |
| CDY54350 | Canola | plasma membrane | 25.46 | 28.92 |
| CDY14989 | Canola | plasma membrane | 28.12 | 25.54 |
| CDX71327 | Canola | plasma membrane | 27.85 | 25.24 |
| CDX90414 | Canola | plasma membrane | 24.67 | 24.8 |
| CDY08900 | Canola | plasma membrane | 19.89 | 24.12 |
| CDY01525 | Canola | plasma membrane | 24.14 | 24.07 |
| CDX78835 | Canola | plasma membrane | 24.93 | 24.04 |
| CDX99493 | Canola | plasma membrane | 24.4 | 23.47 |
| CDX76538 | Canola | plasma membrane | 24.14 | 23.21 |
| CDX76537 | Canola | plasma membrane | 23.87 | 23.08 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 23.61 | 22.82 |
| CDY46618 | Canola | plasma membrane | 13.53 | 22.47 |
| CDY29741 | Canola | plasma membrane | 22.28 | 22.28 |
| CDY08895 | Canola | plasma membrane | 23.34 | 22.28 |
| CDX76536 | Canola | plasma membrane | 17.24 | 22.18 |
| CDY12422 | Canola | plasma membrane | 22.02 | 22.07 |
| CDY08897 | Canola | plasma membrane | 22.81 | 21.99 |
| CDY17197 | Canola | extracellular, plasma membrane | 20.42 | 21.94 |
| CDX76540 | Canola | plasma membrane | 23.08 | 21.91 |
| CDX73177 | Canola | plasma membrane | 24.14 | 21.51 |
| CDY27947 | Canola | plasma membrane | 19.89 | 21.49 |
| CDY16284 | Canola | plasma membrane | 21.49 | 21.49 |
| CDX90135 | Canola | plasma membrane | 18.04 | 21.05 |
| CDX90136 | Canola | plasma membrane | 19.63 | 21.02 |
| CDY35722 | Canola | plasma membrane | 19.36 | 20.62 |
| CDY35721 | Canola | plasma membrane | 17.24 | 20.38 |
| CDX94594 | Canola | extracellular, plasma membrane | 18.83 | 20.34 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 25.73 | 20.17 |
| CDY15687 | Canola | plasma membrane | 16.18 | 20.13 |
| CDX94595 | Canola | plasma membrane | 18.57 | 20.06 |
| CDX99494 | Canola | plasma membrane | 26.53 | 19.49 |
| CDY09527 | Canola | plasma membrane | 16.45 | 19.38 |
| CDY09533 | Canola | plasma membrane | 16.18 | 19.06 |
| CDY02338 | Canola | plasma membrane | 16.18 | 19.06 |
| CDX76826 | Canola | cytosol, peroxisome, plasma membrane | 17.77 | 17.68 |
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 17.51 | 17.41 |
| CDY72169 | Canola | plasma membrane | 11.67 | 17.39 |
| CDY63702 | Canola | plasma membrane | 32.36 | 15.91 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 0.27 | 0.64 |
Protein Annotations
| EnsemblPlants:CDY22619 | EnsemblPlantsGene:GSBRNA2T00019286001 | GO:A0A078GBA0 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 |
| PANTHER:PTHR31376:SF34 | PFAM:PF16913 | ProteinID:CDY22619 | ProteinID:CDY22619.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EC1FFD | UniProt:A0A078GBA0 | MapMan:24.2.1.6 | : | : | : |
Description
BnaC08g42530DBnaC08g42530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBA0]
Coordinates
chrLK032134:+:132280..133413
Molecular Weight (calculated)
42477.1 Da
IEP (calculated)
8.382
GRAVY (calculated)
0.384
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MEELQDPERG GEILTLEVKQ RKWWISVFFC GFLIFTGDSL VMLLLNFYYV QDKRSESDQN RQYRGTWTQA LLQNAAFPIL IPLFFLFPSP KQKAEPVSSD
101: PPPFLRVLSL YVSLGVLVSV HSKLYALAKL YVGWGILVST QLILTSLFLA FINRLKFNRW IIVSITFTLA SDFFGSPEFS GAPDEDESYT YGIKAWLILI
201: FPTLAFSLSL SLMQLGFEKV LVKTKRYGDK KVFRMVLEMQ IVVSFIAALI CLVGLFASGE FKELNGDSVR FKKGEGYYGL SLVGLAISWQ VWAVGLLGLV
301: LLVSGVFADV VHMCASPVVA LLVVLAFDFK DDEFGWQRRG ALLGSVLALA SYSYSLYKTK KKDVEELNKR ELNNSEA
101: PPPFLRVLSL YVSLGVLVSV HSKLYALAKL YVGWGILVST QLILTSLFLA FINRLKFNRW IIVSITFTLA SDFFGSPEFS GAPDEDESYT YGIKAWLILI
201: FPTLAFSLSL SLMQLGFEKV LVKTKRYGDK KVFRMVLEMQ IVVSFIAALI CLVGLFASGE FKELNGDSVR FKKGEGYYGL SLVGLAISWQ VWAVGLLGLV
301: LLVSGVFADV VHMCASPVVA LLVVLAFDFK DDEFGWQRRG ALLGSVLALA SYSYSLYKTK KKDVEELNKR ELNNSEA
001: MEEFQGPEPR GQMMSENPRS LELNQRKWWI SVFICGFLIF AGDSLVMLLL NFFYVQDNRS ESDQDRQYKG TWTQALIQNA AFPILIPFFF ILSSPKPNPE
101: TVSNQTNNGW FRVLSLYVSL GVLVSVYSKL YALGKLYVGW GILLSTQLIL TSLFSAFINR LKFNRWIIIS IIFTLGADFF GGPAFAGTPN EDETDPYDIK
201: AWLILIFPTL AFSLSLCLMQ LGFDKVLVKT KRYGNKKVFR MVLEMQICVS FIATLICTVG LFASGEFKEL KGDSERFKKG KTYYILSLVG LALSWQVWAV
301: GLLGLVLLVS GLFADVVHMG ASPVVALLVV LAFDFMDDEF GWQRRGALLG AVLALASYFY SLHTKKKKEI AELNKRENNN SEA
101: TVSNQTNNGW FRVLSLYVSL GVLVSVYSKL YALGKLYVGW GILLSTQLIL TSLFSAFINR LKFNRWIIIS IIFTLGADFF GGPAFAGTPN EDETDPYDIK
201: AWLILIFPTL AFSLSLCLMQ LGFDKVLVKT KRYGNKKVFR MVLEMQICVS FIATLICTVG LFASGEFKEL KGDSERFKKG KTYYILSLVG LALSWQVWAV
301: GLLGLVLLVS GLFADVVHMG ASPVVALLVV LAFDFMDDEF GWQRRGALLG AVLALASYFY SLHTKKKKEI AELNKRENNN SEA
Arabidopsis Description
PUP16Probable purine permease 16 [Source:UniProtKB/Swiss-Prot;Acc:O04508]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.