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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14989 Canola plasma membrane 99.52 99.76
Bra036955.1-P Field mustard plasma membrane 99.28 99.52
CDY12545 Canola plasma membrane 69.47 96.98
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 64.9 90.3
AT1G44750.1 Thale cress plasma membrane 81.01 88.92
KRH40250 Soybean endoplasmic reticulum, plasma membrane, vacuole 59.13 67.96
KRH00977 Soybean endoplasmic reticulum, plasma membrane, vacuole 58.65 66.85
VIT_15s0021g00650.t01 Wine grape plastid 56.49 61.84
PGSC0003DMT400004320 Potato plasma membrane 54.57 61.52
Solyc01g088550.2.1 Tomato plasma membrane 53.37 60.99
CDY54350 Canola plasma membrane 46.39 58.13
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 42.07 57.95
GSMUA_Achr5P12690_001 Banana plasma membrane 48.32 57.59
CDX75141 Canola plasma membrane 45.43 56.93
Os02t0689200-03 Rice plasma membrane 50.48 54.55
Zm00001d051504_P001 Maize golgi, peroxisome, plasma membrane 49.76 53.91
TraesCS6B01G289900.1 Wheat peroxisome 48.08 51.41
TraesCS6D01G243400.1 Wheat golgi, peroxisome, plasma membrane 47.84 51.03
TraesCS6A01G262900.1 Wheat plasma membrane 47.6 50.77
HORVU2Hr1G105300.1 Barley peroxisome 44.95 50.0
TraesCS2B01G474100.1 Wheat peroxisome 44.71 49.73
TraesCS2D01G452400.1 Wheat peroxisome 44.71 49.73
Zm00001d002515_P001 Maize peroxisome 44.47 49.73
EES11332 Sorghum peroxisome 44.47 49.47
Zm00001d003417_P001 Maize endoplasmic reticulum, extracellular, vacuole 37.02 49.2
TraesCS5A01G413800.1 Wheat peroxisome 44.23 49.2
TraesCS2A01G452600.1 Wheat peroxisome 43.99 48.93
HORVU6Hr1G066740.2 Barley golgi, mitochondrion 48.32 48.09
TraesCS2B01G473900.1 Wheat plasma membrane 43.03 46.98
TraesCS2D01G452200.1 Wheat plasma membrane 42.31 46.19
TraesCS2A01G452400.1 Wheat plasma membrane 42.31 46.07
EES11334 Sorghum peroxisome 41.59 45.41
TraesCS2D01G452300.1 Wheat peroxisome 41.59 45.17
Os09t0548600-00 Rice endoplasmic reticulum, extracellular, vacuole 37.26 44.8
TraesCS2B01G473800.1 Wheat endoplasmic reticulum, extracellular, vacuole 37.02 44.64
HORVU2Hr1G105340.1 Barley golgi, peroxisome, plasma membrane 41.83 44.5
Zm00001d002514_P001 Maize endoplasmic reticulum, peroxisome, plasma membrane 40.62 44.24
KXG27004 Sorghum golgi, peroxisome, vacuole 41.83 44.16
TraesCS2A01G452500.1 Wheat peroxisome 40.87 43.93
CDY08900 Canola plasma membrane 32.69 43.73
CDY08897 Canola plasma membrane 40.87 43.48
CDX78835 Canola plasma membrane 40.62 43.22
CDX76538 Canola plasma membrane 40.38 42.86
CDX99493 Canola plasma membrane 40.38 42.86
HORVU2Hr1G105360.5 Barley peroxisome 42.31 42.72
CDY08899 Canola cytosol, peroxisome, plasma membrane 39.9 42.56
CDX76537 Canola plasma membrane 39.9 42.56
HORVU2Hr1G105240.3 Barley peroxisome 41.83 42.23
TraesCS2D01G452100.1 Wheat plasma membrane 39.66 42.09
KXG26473 Sorghum cytosol, peroxisome, plasma membrane 39.18 41.79
EES05697 Sorghum plastid 49.76 41.32
CDX90414 Canola plasma membrane 37.02 41.07
CDY01525 Canola plasma membrane 37.02 40.74
CDX76536 Canola plasma membrane 28.61 40.61
CDY08895 Canola plasma membrane 38.22 40.25
CDX76540 Canola plasma membrane 37.98 39.8
TraesCS2B01G474000.1 Wheat cytosol, peroxisome, plasma membrane 42.55 39.6
KXG24673 Sorghum peroxisome 38.94 39.51
EES10997 Sorghum plasma membrane 38.7 38.61
TraesCS2A01G452300.1 Wheat mitochondrion 40.14 38.22
CDX78833 Canola cytosol, extracellular, plasma membrane 39.66 34.3
CDY27947 Canola plasma membrane 28.37 33.81
CDY17197 Canola extracellular, plasma membrane 28.12 33.33
CDX99494 Canola plasma membrane 40.14 32.55
CDY72169 Canola plasma membrane 19.47 32.02
CDY35722 Canola plasma membrane 26.92 31.64
CDX90136 Canola plasma membrane 26.44 31.25
CDY12422 Canola plasma membrane 27.64 30.59
CDY29741 Canola plasma membrane 27.64 30.5
CDX94595 Canola plasma membrane 25.48 30.37
CDX90135 Canola plasma membrane 23.56 30.34
HORVU5Hr1G019740.1 Barley cytosol, plastid 24.28 30.33
CDX94594 Canola extracellular, plasma membrane 25.24 30.09
CDY16284 Canola plasma membrane 27.16 29.97
CDY46618 Canola plasma membrane 16.11 29.52
CDY35721 Canola plasma membrane 22.6 29.47
CDY34789 Canola cytosol, peroxisome, plasma membrane 25.72 28.23
CDX76826 Canola cytosol, peroxisome, plasma membrane 25.72 28.23
CDY22619 Canola plasma membrane 25.24 27.85
CDY09527 Canola plasma membrane 21.39 27.81
CDY15687 Canola plasma membrane 20.19 27.72
CDY09533 Canola plasma membrane 21.15 27.5
CDY02338 Canola plasma membrane 21.15 27.5
CDX93469 Canola plasma membrane 25.48 27.46
CDY64442 Canola plasma membrane 25.48 27.11
CDX94937 Canola plasma membrane 24.52 26.91
Zm00001d026042_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 43.27 26.75
CDY53149 Canola plasma membrane 25.24 26.72
CDY39353 Canola plasma membrane 24.28 26.44
CDY29404 Canola plasma membrane 24.04 26.25
CDY29403 Canola plasma membrane 23.8 25.71
CDY39352 Canola plasma membrane 23.8 25.38
CDY63252 Canola extracellular 26.2 25.23
CDY29401 Canola plasma membrane 20.67 25.0
CDY67986 Canola plasma membrane 22.36 24.93
CDX96651 Canola plasma membrane 24.28 23.88
CDY31805 Canola plasma membrane 25.0 23.48
CDX73177 Canola plasma membrane 18.27 17.97
CDY63702 Canola plasma membrane 23.08 12.52
CDX96650 Canola cytosol, plasma membrane, vacuole 0.0 0.0
Protein Annotations
EnsemblPlants:CDX71327EnsemblPlantsGene:GSBRNA2T00144993001GO:A0A078C374GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376
PANTHER:PTHR31376:SF2PFAM:PF16913ProteinID:CDX71327ProteinID:CDX71327.1SEG:segSUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI0004EDB50AMapMan:24.2.1.6:::
Description
BnaC07g06060D
Coordinates
chrLK031792:+:3109702..3112190
Molecular Weight (calculated)
45596.4 Da
IEP (calculated)
5.172
GRAVY (calculated)
0.445
Length
416 amino acids
Sequence
(BLAST)
001: MIQHPNDETE LAQCDDSEED ENARRFDYSR FGNGIMIFDW SSDVSQNSIH RSGNQEPILV KEEESVEGIP SPLLKLKSWQ WWVLVSINIL FLIGGQAASV
101: LLGRFYCEEG GNSKWMATLV QTAAFPILYI PLLLLPSSSS SEPASCSLKT IVLIYVLLGV IIAGDNMLYS VGLLYLSAST YSLICATQLA FNAVFSYFIN
201: AQKFTALILN SVVLLSFSAA LIALNDDADA PSGVSRSKYV VGFVCTLAAS ALYSLLLSLM QFSFEKILKK ETFSVVLEMQ IYTSLVATCV AVIGLFASGE
301: WRTLHGEMEG YHKGQSSYVL TLLGTAVTWQ VCSVGVVGLI FLVTSLFSNV ISTLSLAVTP LAALAVFRDK MSGVKVMAML IALWGFASYV YQNHLDDLKV
401: RRARKQPQTG QVDPHC
Best Arabidopsis Sequence Match ( AT1G44750.2 )
(BLAST)
001: MSGNQEPILV KEESVVGIPT PLLKLKSWQW WVLVSVNIFF LIGGQAASVL LGRFYYDEGG NSKWMATLVQ TAAFPILYIP LLLLPSSASV ESSESSCSLK
101: YIVLIYVLLG VIIAGDNMLY SVGLLYLSAS TYSLICATQL AFNAVFSYFI NAQKFTALIL NSVVLLSFSA ALIALNDDAD TPSGVSRSKY IVGFVCTLAA
201: SALYSLLLSL MQFSFEKILK RETFSVVLEM QIYTSLVATC VSVIGLFASG EWRTLHGEME GYHKGQASYV LTLVWTAVTW QVCSVGVVGL IFLVTSLFSN
301: VISTLSLAVT PLAALVVFRD KMSGVKIMAM LIAIWGFASY VYQNHIDDLK VRQARQQAQA GRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.