Factsheet for TraesCS2B01G474000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G132400.1
TraesCS3A01G294200.1
TraesCS3B01G167100.1
TraesCS3B01G328800.1
TraesCS3D01G148600.1
TraesCS3D01G294000.1
TraesCS6A01G160500.1
TraesCS6B01G190900.1
TraesCS6D01G152200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41160.1	TraesCS3A01G132400.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3A01G294200.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3B01G167100.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3B01G328800.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3D01G148600.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3D01G294000.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6A01G160500.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6B01G190900.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6D01G152200.1	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G452300.1	Wheat	peroxisome	82.1	95.82
TraesCS2A01G452500.1	Wheat	peroxisome	82.33	95.09
HORVU2Hr1G105340.1	Barley	golgi, peroxisome, plasma membrane	82.1	93.86
HORVU2Hr1G105240.3	Barley	peroxisome	82.1	89.08
TraesCS2B01G473900.1	Wheat	plasma membrane	75.84	88.98
KXG27004	Sorghum	golgi, peroxisome, vacuole	63.76	72.33
CDY12545	Canola	plasma membrane	34.45	51.68
KRH40250	Soybean	endoplasmic reticulum, plasma membrane, vacuole	41.83	51.66
CDY36342	Canola	endoplasmic reticulum, plasma membrane, vacuole	34.0	50.84
KRH00977	Soybean	endoplasmic reticulum, plasma membrane, vacuole	40.49	49.59
TraesCS2B01G473800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	38.26	49.57
Solyc01g088550.2.1	Tomato	plasma membrane	40.27	49.45
PGSC0003DMT400004320	Potato	plasma membrane	40.27	48.78
AT1G44750.1	Thale cress	plasma membrane	40.49	47.76
TraesCS2B01G474100.1	Wheat	peroxisome	39.82	47.59
TraesCS6B01G289900.1	Wheat	peroxisome	41.39	47.56
VIT_19s0014g00150.t01	Wine grape	plasma membrane	38.26	45.12
VIT_15s0021g00650.t01	Wine grape	plastid	37.36	43.95
Zm00001d026042_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	65.77	43.69
KRH13483	Soybean	plasma membrane	29.98	43.65
CDY14989	Canola	plasma membrane	39.82	42.89
Bra036955.1-P	Field mustard	plasma membrane	39.82	42.89
CDX71327	Canola	plasma membrane	39.6	42.55
Bra037874.1-P	Field mustard	plasma membrane	30.87	41.32
AT4G08700.1	Thale cress	plasma membrane	32.89	40.72
KRH21843	Soybean	mitochondrion	37.81	40.24
AT5G41160.1	Thale cress	plasma membrane	31.32	38.46
CDY54350	Canola	plasma membrane	26.85	36.14
CDX75141	Canola	plasma membrane	25.73	34.64
TraesCS4B01G304100.1	Wheat	extracellular	10.07	31.69
TraesCS4B01G303600.1	Wheat	plasma membrane	21.48	30.48
TraesCS4B01G304200.1	Wheat	plastid	25.73	29.64
TraesCS2B01G617100.1	Wheat	plasma membrane	23.71	29.2
TraesCS4B01G303700.1	Wheat	plastid	25.06	28.64
TraesCS4B01G303900.1	Wheat	plastid	25.06	28.64
TraesCS5B01G244800.1	Wheat	plasma membrane	23.49	27.85
TraesCS5B01G431200.2	Wheat	plasma membrane	23.04	26.75
TraesCS3B01G300900.1	Wheat	plastid	22.6	26.58
TraesCS5B01G361100.2	Wheat	cytosol, endoplasmic reticulum, plastid	24.16	26.21
TraesCS5B01G245000.1	Wheat	plasma membrane	15.88	25.54
TraesCS5B01G245100.1	Wheat	plastid	23.27	25.0
TraesCS5B01G244900.1	Wheat	plasma membrane	21.03	24.8
TraesCS1B01G413400.1	Wheat	plastid	20.81	24.54
TraesCS1B01G413500.1	Wheat	plastid	21.48	23.76
TraesCS1B01G413300.1	Wheat	mitochondrion	21.25	22.51

Protein Annotations

EnsemblPlants:TraesCS2B01G474000.1	EnsemblPlantsGene:TraesCS2B01G474000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF33
PFAM:PF16913	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	MapMan:24.2.1.6	:

Description

No Description!

Coordinates

chr2B:-:671038801..671040242

Molecular Weight (calculated)

48337.0 Da

IEP (calculated)

6.511

GRAVY (calculated)

0.428

Length

447 amino acids

Sequence
(BLAST)

001: MSLIDGGLRF QREEDEDDTH PCAIGSVKII PLPRLLSCRV SFRYFGFAGY RELCADMGDA GEIHLQIAGT RGEEAAQGVA DNGTPPATAA PAPPSVSERV
101: QWWAVVLVNI VLVLTGQSVA NLLGRIYYDQ GGGSLWMATV VQSCGTPLAI PLLLYFRRRP KATTTVVTRP PLLKISAIYA GLGVLLAGDN LMYSYALLYL
201: PLSTYSLVCA TQLSFNAVFS YFLNKQKFTA LILNSVVLLT FSAALVGVSH GSDGTNSSVP PGKFPLGFVL TLSASALFSL ILSLMQLTFD MVLKSDTFYD
301: VMEMQFWSNT AAAVVSVAGL FISGEWSALH GEMDGYKKGR VAYGMTLAWT AISWQLTTMG LMGLVASVSS LFTNVISTVG LPLSPIIAVI FLGDRMDGVK
401: VLAMLVAVWG FLSYIYQHYL DDAKVKKILA ERSADDDQHR TVKLATE

Best Arabidopsis Sequence Match ( AT1G44750.1 )
(BLAST)

001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC

Arabidopsis Description

PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.