Factsheet for TraesCS4B01G303600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G304100.1	Wheat	extracellular	40.32	89.44
TraesCS4B01G303700.1	Wheat	plastid	94.92	76.47
TraesCS4B01G303900.1	Wheat	plastid	90.16	72.63
HORVU4Hr1G078220.1	Barley	endoplasmic reticulum, plasma membrane	61.59	71.32
TraesCS4B01G304200.1	Wheat	plastid	85.4	69.33
Zm00001d048232_P001	Maize	plastid	78.73	65.96
Zm00001d027979_P001	Maize	plasma membrane	65.08	65.71
Os03t0187800-01	Rice	plastid	80.63	63.66
Zm00001d027978_P001	Maize	plastid	78.1	63.57
OQU93095	Sorghum	plasma membrane	60.0	50.0
TraesCS5B01G244800.1	Wheat	plasma membrane	42.22	35.28
TraesCS5B01G431200.2	Wheat	plasma membrane	42.86	35.06
TraesCS2B01G617100.1	Wheat	plasma membrane	40.32	34.99
Solyc12g057090.1.1	Tomato	plasma membrane	32.38	34.34
TraesCS5B01G245100.1	Wheat	plastid	41.27	31.25
TraesCS5B01G244900.1	Wheat	plasma membrane	37.46	31.13
Solyc12g057100.1.1	Tomato	cytosol, golgi, plasma membrane	35.56	30.94
TraesCS5B01G245000.1	Wheat	plasma membrane	26.67	30.22
VIT_18s0001g06300.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	29.21	29.11
PGSC0003DMT400045772	Potato	cytosol, peroxisome, vacuole	27.3	27.04
TraesCS3B01G300900.1	Wheat	plastid	29.84	24.74
PGSC0003DMT400045771	Potato	endoplasmic reticulum, extracellular, plasma membrane	13.33	24.71
TraesCS2B01G473800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	26.67	24.35
TraesCS2B01G473900.1	Wheat	plasma membrane	29.21	24.15
TraesCS1B01G413500.1	Wheat	plastid	30.79	24.01
TraesCS1B01G413400.1	Wheat	plastid	28.25	23.48
TraesCS5B01G361100.2	Wheat	cytosol, endoplasmic reticulum, plastid	30.16	23.06
TraesCS2B01G474100.1	Wheat	peroxisome	27.3	22.99
TraesCS6B01G289900.1	Wheat	peroxisome	27.94	22.62
TraesCS1B01G413300.1	Wheat	mitochondrion	29.21	21.8
TraesCS2B01G474000.1	Wheat	cytosol, peroxisome, plasma membrane	30.48	21.48

Protein Annotations

EnsemblPlants:TraesCS4B01G303600.1	EnsemblPlantsGene:TraesCS4B01G303600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF6
PFAM:PF16913	SEG:seg	TMHMM:TMhelix	MapMan:24.2.1.6	:	:

Description

No Description!

Coordinates

chr4B:-:591538157..591539759

Molecular Weight (calculated)

33306.6 Da

IEP (calculated)

9.363

GRAVY (calculated)

0.747

Length

315 amino acids

Sequence
(BLAST)

001: MQEAAKTPIA SPPGATAAST DSPARYRPSP LVIFSACLIL VGAGGPLLLR VYFVHGGQRL WLSALLQISG WPLLLPPLCV SLFHGRRHGI ANLLLPPRLV
101: GAAAVLGGFY AVSCYVYAMG SQALPLSTSS LLLATQLAFT AVFAFLFVGL RFTPFSANAV LLLTIGPAVL RAVLGAAGTM VCLLGMAIKG DFGALRSEAA
201: SFGLGKTNYY LVLVWDAVSW QLLNLGIMGL ITCASSLLAG IMIAVLLPLS QILAVMFLHE KFDGPKGIAL VLSLWGFASY MYGEKVQQKK VEAQKSELLQ
301: QQVASKTEDL ELAAP

Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)

001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C

Arabidopsis Description

PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.