Factsheet for TraesCS5B01G245100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plasma membrane, plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G254300.1	Wheat	cytosol, peroxisome, plasma membrane	85.1	98.33
TraesCS5A01G247800.1	Wheat	cytosol, peroxisome, plasma membrane	84.62	97.51
Zm00001d005934_P002	Maize	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	70.91	81.72
HORVU5Hr1G069920.5	Barley	cytosol	53.12	79.5
Os09t0467400-03	Rice	plasma membrane	67.07	77.29
Zm00001d005935_P001	Maize	plasma membrane	48.56	71.89
HORVU5Hr1G069910.2	Barley	cytosol, peroxisome, plasma membrane	62.02	70.3
EER99040	Sorghum	plasma membrane	63.7	69.92
EER99038	Sorghum	plasma membrane	48.08	68.73
GSMUA_Achr5P24450_001	Banana	plasma membrane	55.05	62.23
TraesCS5B01G244800.1	Wheat	plasma membrane	48.8	53.85
TraesCS2B01G617100.1	Wheat	plasma membrane	46.15	52.89
TraesCS5B01G431200.2	Wheat	plasma membrane	46.88	50.65
TraesCS5B01G245000.1	Wheat	plasma membrane	33.65	50.36
GSMUA_Achr10P...	Banana	plasma membrane	57.21	48.47
Zm00001d020781_P003	Maize	plasma membrane	75.48	47.79
TraesCS5B01G244900.1	Wheat	plasma membrane	41.35	45.38
TraesCS4B01G304100.1	Wheat	extracellular	15.14	44.37
TraesCS4B01G303600.1	Wheat	plasma membrane	31.25	41.27
TraesCS4B01G304200.1	Wheat	plastid	38.22	40.98
TraesCS4B01G303700.1	Wheat	plastid	38.22	40.66
TraesCS4B01G303900.1	Wheat	plastid	38.22	40.66
TraesCS2B01G473800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	26.44	31.88
TraesCS6B01G289900.1	Wheat	peroxisome	27.4	29.31
TraesCS3B01G300900.1	Wheat	plastid	26.68	29.21
TraesCS2B01G474100.1	Wheat	peroxisome	26.2	29.14
TraesCS1B01G413400.1	Wheat	plastid	26.2	28.76
TraesCS5B01G361100.2	Wheat	cytosol, endoplasmic reticulum, plastid	28.37	28.64
TraesCS1B01G413500.1	Wheat	plastid	27.16	27.97
TraesCS2B01G473900.1	Wheat	plasma membrane	24.28	26.51
TraesCS1B01G413300.1	Wheat	mitochondrion	26.2	25.83
TraesCS2B01G474000.1	Wheat	cytosol, peroxisome, plasma membrane	25.0	23.27

Protein Annotations

EnsemblPlants:TraesCS5B01G245100.1	EnsemblPlantsGene:TraesCS5B01G245100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF1
PFAM:PF16913	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	MapMan:24.2.1.6	:

Description

No Description!

Coordinates

chr5B:-:426512226..426520274

Molecular Weight (calculated)

44427.7 Da

IEP (calculated)

9.849

GRAVY (calculated)

0.564

Length

416 amino acids

Sequence
(BLAST)

001: MSVAETLSIH ILSPPAGAIV VSKAPCALAS KNGVLDKRHP ATVPSTQTRA HPRNVGMDVE APKDDDQRPA PPARGKAMHR FLVALNCGML TLGTTGGPLL
101: SRLYFSKGGH RKWLSAWLET GGWPLLLLPV AASYLSRRAH DPSAPVVLTP PRILLAAAGL GLATGADDFL YAYGLSFVPV STSAILISTQ LAFTVFFAFL
201: IVRQRLTALS VNAVALLTVG AVVLGLHVSS DRPAGVTKGQ YWLGFLLTLA AAALYGLVLP LIELTYKRAA GGGRVVTYAL VMEMQLVMGF FATAFCTVGM
301: IVNNDFQAIS REARAFQLGE ARYYTVLVWS AILWQFFFLG AVGVIFCVHT LFAGILIAVF IPVTEVLAVI FLHEKFTSEK GVALALSLWG LASYSYGEYS
401: DAKVAKKKAA LDAQAS

Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)

001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C

Arabidopsis Description

PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.