Factsheet for TraesCS2B01G473900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, plasma membrane
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G132400.1
TraesCS3A01G294200.1
TraesCS3B01G167100.1
TraesCS3B01G328800.1
TraesCS3D01G148600.1
TraesCS3D01G294000.1
TraesCS6A01G160500.1
TraesCS6B01G190900.1
TraesCS6D01G152200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41160.1	TraesCS3A01G132400.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3A01G294200.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3B01G167100.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3B01G328800.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3D01G148600.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3D01G294000.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6A01G160500.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6B01G190900.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6D01G152200.1	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G452200.1	Wheat	plasma membrane	97.11	97.11
TraesCS2A01G452400.1	Wheat	plasma membrane	96.33	96.07
HORVU2Hr1G105360.5	Barley	peroxisome	90.29	83.5
TraesCS2B01G474000.1	Wheat	cytosol, peroxisome, plasma membrane	88.98	75.84
KXG27004	Sorghum	golgi, peroxisome, vacuole	72.7	70.3
KRH40250	Soybean	endoplasmic reticulum, plasma membrane, vacuole	50.92	53.59
CDY12545	Canola	plasma membrane	41.21	52.68
KRH00977	Soybean	endoplasmic reticulum, plasma membrane, vacuole	49.08	51.23
CDY36342	Canola	endoplasmic reticulum, plasma membrane, vacuole	40.16	51.17
Solyc01g088550.2.1	Tomato	plasma membrane	47.77	50.0
PGSC0003DMT400004320	Potato	plasma membrane	47.77	49.32
TraesCS6B01G289900.1	Wheat	peroxisome	49.61	48.59
TraesCS2B01G473800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.83	48.41
AT1G44750.1	Thale cress	plasma membrane	47.77	48.02
TraesCS2B01G474100.1	Wheat	peroxisome	45.93	46.79
VIT_19s0014g00150.t01	Wine grape	plasma membrane	44.36	44.59
VIT_15s0021g00650.t01	Wine grape	plastid	43.57	43.68
CDY14989	Canola	plasma membrane	47.24	43.37
Bra036955.1-P	Field mustard	plasma membrane	47.24	43.37
CDX71327	Canola	plasma membrane	46.98	43.03
Bra037874.1-P	Field mustard	plasma membrane	37.53	42.81
KRH13483	Soybean	plasma membrane	34.38	42.67
AT4G08700.1	Thale cress	plasma membrane	39.37	41.55
Zm00001d026042_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	72.97	41.31
AT5G41160.1	Thale cress	plasma membrane	38.06	39.84
KRH21843	Soybean	mitochondrion	43.57	39.52
CDY54350	Canola	plasma membrane	32.02	36.75
CDX75141	Canola	plasma membrane	30.97	35.54
TraesCS4B01G304100.1	Wheat	extracellular	11.55	30.99
TraesCS4B01G303600.1	Wheat	plasma membrane	24.15	29.21
TraesCS2B01G617100.1	Wheat	plasma membrane	27.82	29.2
TraesCS4B01G304200.1	Wheat	plastid	28.61	28.09
TraesCS4B01G303900.1	Wheat	plastid	28.08	27.37
TraesCS4B01G303700.1	Wheat	plastid	28.08	27.37
TraesCS3B01G300900.1	Wheat	plastid	27.03	27.11
TraesCS5B01G244800.1	Wheat	plasma membrane	25.98	26.26
TraesCS5B01G431200.2	Wheat	plasma membrane	26.51	26.23
TraesCS5B01G361100.2	Wheat	cytosol, endoplasmic reticulum, plastid	28.08	25.97
TraesCS5B01G244900.1	Wheat	plasma membrane	24.67	24.8
TraesCS5B01G245100.1	Wheat	plastid	26.51	24.28
TraesCS1B01G413400.1	Wheat	plastid	23.88	24.01
TraesCS5B01G245000.1	Wheat	plasma membrane	17.32	23.74
TraesCS1B01G413500.1	Wheat	plastid	24.93	23.51
TraesCS1B01G413300.1	Wheat	mitochondrion	24.67	22.27

Protein Annotations

EnsemblPlants:TraesCS2B01G473900.1	EnsemblPlantsGene:TraesCS2B01G473900	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF33
PFAM:PF16913	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	MapMan:24.2.1.6	:

Description

No Description!

Coordinates

chr2B:+:670853257..670854511

Molecular Weight (calculated)

40975.0 Da

IEP (calculated)

5.745

GRAVY (calculated)

0.520

Length

381 amino acids

Sequence
(BLAST)

001: MGDAGEIRMQ IAGTGGVANN GTSPATAAPP TMSERVQWWA VVLVNIVFLL GGQSVASFLG RIYYDQGGGS LWMATVVQSC GTPLAIPLLL YFRRRPRSTA
101: VTRPPLLKIS AIYAGLGVLL AADNLMYSYA LLYLSLSTYS LICATQLSFN AVFSYFLNKE KFTALILNSV VLLTFSAALV GVSHGSDGTN SSVPEGKFPL
201: GFALTLTASA LFSLILSLMQ LTFDKVLKSD TFYDVVEMQF WSNTAAAVVS VAGLFISGEW SSLDGEMDGY KKGKVAYGMT LAWTAISWQL ATVGMMGLVA
301: AVSSLFTNVI STVGLPLSPI VAVIFFGDQM DGVKVLAMLI GVWGFLSYIY QHYLDDAKVK KILAERLADD DEHQTVKLNT E

Best Arabidopsis Sequence Match ( AT1G44750.1 )
(BLAST)

001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC

Arabidopsis Description

PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.