Factsheet for TraesCS3A01G132400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 3
extracellular 1
golgi 2
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, plasma membrane
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G267900.1
TraesCS1B01G278600.1
TraesCS1D01G267800.1
TraesCS2A01G452300.1
TraesCS2A01G452400.1
TraesCS2A01G452500.1
TraesCS2A01G452600.1
TraesCS2B01G473800.1
TraesCS2B01G473900.1
TraesCS2B01G474000.1
TraesCS2B01G474100.1
TraesCS2D01G452100.1
TraesCS2D01G452200.1
TraesCS2D01G452300.1
TraesCS2D01G452400.1
TraesCS3A01G132400.1
TraesCS3A01G233800.1
TraesCS3A01G294200.1
TraesCS3B01G167100.1
TraesCS3B01G265500.1
TraesCS3B01G328800.1
TraesCS3D01G148600.1
TraesCS3D01G219600.1
TraesCS3D01G294000.1
TraesCS5A01G413800.1
TraesCS6A01G160500.1
TraesCS6A01G262900.1
TraesCS6B01G081300.1
TraesCS6B01G190900.1
TraesCS6B01G289900.1
TraesCS6D01G152200.1
TraesCS6D01G243400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	TraesCS3A01G233800.1	AT2G26650.1	15299147
AT5G46240.1	TraesCS3B01G265500.1	AT2G26650.1	15299147
AT5G46240.1	TraesCS3D01G219600.1	AT2G26650.1	15299147
AT5G46240.1	TraesCS1A01G267900.1	AT4G22200.1	12034902
AT5G46240.1	TraesCS1B01G278600.1	AT4G22200.1	12034902
AT5G46240.1	TraesCS1D01G267800.1	AT4G22200.1	12034902
AT5G46240.1	TraesCS6B01G081300.1	AT4G22200.1	12034902
AT5G46240.1	TraesCS1A01G267900.1	AT4G22200.1	15299147
AT5G46240.1	TraesCS1B01G278600.1	AT4G22200.1	15299147
AT5G46240.1	TraesCS1D01G267800.1	AT4G22200.1	15299147
AT5G46240.1	TraesCS6B01G081300.1	AT4G22200.1	15299147
AT5G46240.1	TraesCS1A01G267900.1	AT4G22200.1	17085433
AT5G46240.1	TraesCS1B01G278600.1	AT4G22200.1	17085433
AT5G46240.1	TraesCS1D01G267800.1	AT4G22200.1	17085433
AT5G46240.1	TraesCS6B01G081300.1	AT4G22200.1	17085433
AT5G46240.1	TraesCS2A01G452300.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2A01G452400.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2A01G452500.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2A01G452600.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2B01G473800.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2B01G473900.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2B01G474000.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2B01G474100.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2D01G452100.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2D01G452200.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2D01G452300.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2D01G452400.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS5A01G413800.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS6A01G262900.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS6B01G289900.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS6D01G243400.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS3A01G132400.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS3A01G294200.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS3B01G167100.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS3B01G328800.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS3D01G148600.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS3D01G294000.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS6A01G160500.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS6B01G190900.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS6D01G152200.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS3A01G132400.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS3A01G294200.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS3B01G167100.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS3B01G328800.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS3D01G148600.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS3D01G294000.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS6A01G160500.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS6B01G190900.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS6D01G152200.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS3A01G132400.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS3A01G294200.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS3B01G167100.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS3B01G328800.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS3D01G148600.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS3D01G294000.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS6A01G160500.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS6B01G190900.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS6D01G152200.1	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G148600.1	Wheat	plasma membrane	96.94	96.94
TraesCS3B01G167100.1	Wheat	plasma membrane	94.3	94.3
HORVU3Hr1G028670.16	Barley	plasma membrane	91.1	92.38
Os01t0210700-02	Rice	extracellular	65.09	77.87
Zm00001d039386_P001	Maize	plasma membrane	60.08	66.67
TraesCS3A01G294200.1	Wheat	mitochondrion, plasma membrane	41.17	59.2
GSMUA_Achr10P...	Banana	plasma membrane	52.02	56.93
GSMUA_Achr7P09360_001	Banana	plasma membrane	50.9	56.31
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	50.63	53.45
CDY03233	Canola	plasma membrane	48.12	52.74
Bra017567.1-P	Field mustard	plasma membrane	47.98	52.51
CDY35154	Canola	plasma membrane	47.98	52.51
AT5G46240.1	Thale cress	plasma membrane	47.84	50.81
CDY33464	Canola	cytosol, plasma membrane, plastid	47.01	50.75
CDY62359	Canola	cytosol, plasma membrane, plastid	47.01	50.75
CDX78839	Canola	plasma membrane	48.26	50.73
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	46.87	50.6
CDX99479	Canola	plasma membrane	48.12	50.51
Bra013296.1-P	Field mustard	plasma membrane	48.26	50.51
Solyc02g070530.2.1	Tomato	nucleus	47.71	49.85
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	47.29	49.78
PGSC0003DMT400054339	Potato	plasma membrane	47.01	49.13
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	47.01	49.06
TraesCS6A01G160500.1	Wheat	plasma membrane	48.82	48.35
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	47.43	48.16
KRH21063	Soybean	plasma membrane	50.63	46.85
KRH44805	Soybean	plasma membrane	47.29	46.7
KRH11194	Soybean	plasma membrane	50.07	46.33
CDX76529	Canola	plasma membrane	45.06	45.51
Bra021012.1-P	Field mustard	plasma membrane	45.06	45.51
VIT_10s0003g03270.t01	Wine grape	plasma membrane	49.93	45.39
Solyc03g058900.1.1	Tomato	cytosol	11.27	41.54
CDY34066	Canola	endoplasmic reticulum, plasma membrane	33.8	40.17
KRH58233	Soybean	cytosol, extracellular, plasma membrane	12.1	39.19
TraesCS3A01G245200.1	Wheat	mitochondrion	31.71	37.94
TraesCS3A01G233800.1	Wheat	plasma membrane	44.09	35.34
TraesCS1A01G267900.1	Wheat	plastid	39.5	32.72
PGSC0003DMT400054318	Potato	nucleus	14.33	32.7
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.07	32.53
TraesCS2A01G321100.1	Wheat	plastid	38.94	30.7
TraesCS7A01G200200.1	Wheat	cytosol, plasma membrane, vacuole	28.23	24.22
TraesCS7A01G200100.1	Wheat	cytosol	27.82	24.04
TraesCS2A01G312800.1	Wheat	plasma membrane	23.78	23.65
TraesCS7A01G199900.1	Wheat	cytosol	26.98	22.85

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005249	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150
GO:GO:0016020	GO:GO:0055085	InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789	InterPro:Ion_trans_dom
InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PRINTS:PR01463
PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF495	InterPro:RmlC-like_jellyroll	SMART:SM00100
SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G132400	EnsemblPlants:TraesCS3A01G132400.1	InterPro:cNMP-bd-like
InterPro:cNMP-bd_dom	TIGR:cd00038	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:+:109149373..109153632

Molecular Weight (calculated)

82834.6 Da

IEP (calculated)

6.719

GRAVY (calculated)

-0.181

Length

719 amino acids

Sequence
(BLAST)

001: MDNISNIFHN DLLPSLGARA NQSIKLRKFI ISPYDSRYRI WETFLLVLVV YSAWIYPFEL AFLRHLSWKL FLVENIVNSF FAIDIVLTFF LAYLDHKSYL
101: LVDNPKRIAA RYLSSWFILD VCSTIPYQPF GLLFNKHGNG LAYRTLNMLR LWRLRRLSAL FARLEKDIRL NYYWIRCTKL ISVTLFAIHC SGCFIYLIAD
201: TYPDPSRTWI GAAIPNYRSE SLWIRYVTAI YWSITTLTTT GYGDLHAENP REMSFCICFM LFNLGLTAYL IGNMTNLVVQ GSCRTRNFRD TIHAASRFAA
301: RNQLPEQIRD EMLAHICLRY KTEGLKQKET LDSLPKAIRS SIACHLYLPV LEKIYLFHGV SFTCRLQLVT TMEAEYYPPR ETVILQNETP TDVYILVSGA
401: VEERIMIDGR EKVEKLLSGG DIFGEIGVLC NIPQPFTFRT SRISQLLRLN TTVLKNIIQE NKHDKEIIMN NLYQKMNSDQ RFSTDTMEVC EETLDQHFGE
501: YNGCFASNQV NINNESKAGE TIRLACSEER CKELNESDRH GAIHSTTEQG SFNTNIDFPD KGESMENHVA TSQLTDKWKA DEHEHTSTDN CMTGYGGARE
601: RFKNIRQDTI LGQPKITDKM LTCLVAGELQ EITDTRTEAG SVVSERKRVT IHMHPQQNKS LAVPYAEVIN LPESLDQLFG IAREKFPGYC PVKLFNQDFA
701: EIDDITVIRD GDQLFLMEV

Best Arabidopsis Sequence Match ( AT2G25600.1 )
(BLAST)

001: MEKKKVWFWG VKDDGEGGGG RGGGRTKDAE DDVADHLSRD GTMSQYSLSK GLLPSLGANN RSSRDVILPR FIVSPFDPRY RAWETFLVFL VLYTAWASPF
101: EFGFLQKPRP PLSILDNIVN GFFAVDIVLT FFVAFLDKVT YLLVDDPKRI AWRYASTWLI FDVVSTFPYE IFGSLLHESI QGYGIFSMLR LWRLRRVSNC
201: FARLEKDRKY SYFWVRCSKL LLVTLFVIHC GACFLYSIAA HYPDPSKTFM ALTDENWKES PIAVRYNTAM YWSITTFSTT GYGDIHGVNS REMTFILFYM
301: VFNLGLSAYI IGNMTNLVVH VTGRTRKFRD TIQAASGFGQ RNNLPVRLQD QMVAHLCLRY RTDSEGLQQQ EIIDSLPKAI RSSISHYLFY EVVDKIYLFH
401: GISNDLLFQL VTEMKAEYFP PKEDVILQNE APTDFYILVT GAVDIIARVN GVEQVVSEAQ RGHVFGEVGV LCYRPQLFTV RTKRLSQLLR LNRTVLLNLV
501: QANVGDGAII MNNLLQHLKD SEDPVMKGVL ADTEHMLAQG KMDLPLSLCF AAARGDDLLL HQLLRRGSSP NEMDKDGRTA LHIAASKGSH YCVVLLLEHG
601: ADPNIRDSEG NVPLWEAIIG RHREIAKLLA ENGAKLSLDS VSYFSGLAVE KNCLDALKDI IKYGGDVTLP DGNGTTALHR AVSEGHLEIV KFLLDQGADL
701: DWPDSYGWTP RGLADHQGNE EIKTLFHNHR PVEKKPKPIP GIPQSPVTGK PLMKYSSEPT MHSGELVLDG GQVVVSQKRK LNNFRNSLFG IISAANSADD
801: GGEVPRSPAV PGGGGSMIYP ERVTISSPEN GETGGKVVLL PNSMEELLKI GENKMGFVPT KVLTREGAEI DDITLIRDGD FLLLSRDP

Arabidopsis Description

AKT6Potassium channel AKT6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.