Factsheet for TraesCS7A01G200100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G106800.1	Wheat	cytosol	68.87	97.45
TraesCS7D01G203100.1	Wheat	cytosol	95.31	95.66
HORVU7Hr1G040970.5	Barley	cytosol	94.35	82.29
TraesCS7A01G200200.1	Wheat	cytosol, plasma membrane, vacuole	79.93	79.36
TraesCS7A01G199900.1	Wheat	cytosol	80.05	78.45
KXG19708	Sorghum	cytosol	78.12	76.11
Os06t0250600-01	Rice	cytosol	77.64	75.29
Zm00001d037289_P002	Maize	cytosol	78.0	74.43
Zm00001d044717_P001	Maize	cytosol	77.28	73.15
GSMUA_Achr8P22950_001	Banana	cytosol	47.12	72.46
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	65.87	64.85
VIT_17s0000g01980.t01	Wine grape	golgi, plasma membrane	54.69	62.24
Solyc03g097940.2.1	Tomato	plasma membrane	55.05	58.94
VIT_11s0016g05810.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	57.69	57.42
TraesCS2A01G312800.1	Wheat	plasma membrane	47.72	54.91
KRH60563	Soybean	mitochondrion, plasma membrane	49.28	52.63
TraesCS3A01G294200.1	Wheat	mitochondrion, plasma membrane	20.67	34.4
TraesCS3A01G245200.1	Wheat	mitochondrion	20.91	28.95
TraesCS3A01G233800.1	Wheat	plasma membrane	30.65	28.43
TraesCS3A01G132400.1	Wheat	plasma membrane	24.04	27.82
TraesCS6A01G160500.1	Wheat	plasma membrane	24.04	27.55
TraesCS1A01G267900.1	Wheat	plastid	28.49	27.3
TraesCS2A01G321100.1	Wheat	plastid	27.76	25.33

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710
InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG
PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PFAM:PF13857	PRINTS:PR01415
PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217
PANTHER:PTHR10217:SF478	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206
SUPFAM:SSF81324	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7A01G200100	EnsemblPlants:TraesCS7A01G200100.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom
TIGR:cd00038	TIGR:cd00204	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7A:-:162580898..162586750

Molecular Weight (calculated)

94355.6 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.173

Length

832 amino acids

Sequence
(BLAST)

001: MARGARSRRT PAGEEDAEKE YEVDVEPDRW KSSSSRNSRL ELMGRLPPLR RLSRIPGAAD ADAGGGFLRG LVIHPDNKLY RSWTRFIVGW AVYSSFLTPF
101: EFGFFRGLPK KLFFLDIVGQ VAFLVDIVLK FLVAYRDPDT YRIVYNPNSI ALRYCKSSFI FDLLGCFPWD AIYKASGHKE ELRYLLWIRL TRVLKVREFF
201: TELEKDIRVN YLFTRIVKLI VVELYCTHTA ACIFYYLATT LPESMEGYTW IGSLQLGDYS YSHFREIDLA TRYVTSMYFA IVTMATVGYG DIHAINVREM
301: IFVMIYVSFD MVLGAYLIGN MTAMIVKGSA TERFRDKMKE VIRYMNRNRL GKDIREQIKG HLRLQYESSC TEASVLRDIP VSIRAKISQT LYMPYIERTP
401: LFKGCSEEFL QQIVIRLQEE FFLPEEVILE QGSAVDQLYF VCQGALEGAA VGEDGQETIL MLEQGNSFGE IAILCNIPQP YTVRVCELCR LLRLDKESFA
501: HILEIYFTDG RKLLSNLTES DEYGKRVKHI ESDITFHIGK QEEELTLRVN NAAFYGDLHQ LTGLIRAGAN PKNSDYDGRS PLHLAASRGY EDIVQFLIHQ
601: GADINLTDKF GNTPLLEAVR QGHDRVATLL FSKGAKLNLE NAGSHLCIAV SKGDSDFIRG ALAYGADPNS KDYDHRNPLH IAAAEGLYIM AKLLVEAGAS
701: VLATDRRGTT PLDEGHKSGS KPLIMLLEQA KADELSKFPT RGEEVRDKMH TRRCSVFPYH PWDTDAKRKE GVMLWIPHTI NELIGSAQEK LGLSSSCMRL
801: LCQDGATVQD VDMVNDGQKL YLVGDKDMGD SE

Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [cytosol,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.