Factsheet for Os06t0250600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G106900.1	Wheat	cytosol, plasma membrane, vacuole	82.52	84.79
KXG19708	Sorghum	cytosol	84.38	84.78
TraesCS7D01G203200.1	Wheat	cytosol, plasma membrane, vacuole	81.12	84.67
TraesCS7A01G200200.1	Wheat	cytosol, plasma membrane, vacuole	82.17	84.13
Zm00001d037289_P002	Maize	cytosol	83.92	82.57
HORVU7Hr1G040990.20	Barley	endoplasmic reticulum, plasma membrane	76.34	82.29
Zm00001d044717_P001	Maize	cytosol	82.98	81.0
TraesCS7B01G106800.1	Wheat	cytosol	54.55	79.59
TraesCS7D01G203100.1	Wheat	cytosol	75.76	78.41
TraesCS7A01G200100.1	Wheat	cytosol	75.29	77.64
HORVU7Hr1G040880.7	Barley	cytosol, plasma membrane	68.88	76.36
TraesCS7D01G202900.1	Wheat	plasma membrane	71.45	74.94
GSMUA_Achr8P22950_001	Banana	cytosol	47.2	74.86
TraesCS7B01G106600.1	Wheat	cytosol	63.17	73.84
TraesCS7A01G199900.1	Wheat	cytosol	71.56	72.32
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	67.13	68.17
HORVU7Hr1G040970.5	Barley	cytosol	75.41	67.82
VIT_17s0000g01980.t01	Wine grape	golgi, plasma membrane	55.01	64.57
Solyc03g097940.2.1	Tomato	plasma membrane	55.48	61.26
VIT_11s0016g05810.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	58.39	59.93
Os04t0445000-01	Rice	cytosol	31.7	59.91
KRH60563	Soybean	mitochondrion, plasma membrane	48.72	53.66
Os01t0756700-01	Rice	plasma membrane	20.4	34.86
Os04t0117500-00	Rice	plasma membrane	10.84	32.52
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	13.75	31.64
Os01t0210700-02	Rice	extracellular	21.68	30.95
Os06t0254200-00	Rice	plasma membrane, plastid	21.45	30.16
Os02t0245800-01	Rice	plasma membrane	24.94	29.8
Os01t0648000-01	Rice	plasma membrane	30.89	28.34
Os05t0428700-01	Rice	cytosol, plastid	17.02	25.8
Os07t0175400-00	Rice	plastid	18.18	21.94

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	EntrezGene:4340653
EMBL:AK242807	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ProteinID:BAD45736.1	ProteinID:BAD45977.1
ProteinID:BAF19207.2	ProteinID:BAS97057.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005244
GO:GO:0005249	GO:GO:0005267	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034765	GO:GO:0042391	GO:GO:0055085
GO:GO:0071805	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789
InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	EnsemblPlantsGene:Os06g0250600	EnsemblPlants:Os06t0250600-01
PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PRINTS:PR01463	PFscan:PS50042
PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF478	UniProt:Q653P0
InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324
TMHMM:TMhelix	UniParc:UPI000043A3BE	RefSeq:XP_015644419.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg

Description

Ankyrin domain containing protein. (Os06t0250600-01)

Coordinates

chr6:-:7799085..7806567

Molecular Weight (calculated)

97384.8 Da

IEP (calculated)

5.785

GRAVY (calculated)

-0.211

Length

858 amino acids

Sequence
(BLAST)

001: MGRGIGSKRR VEDDDGENMP GRKKKEEEEE EEDDDGEEEY EVDVVRDRIG SSRGSRLALF GSDLRLGRFR PRRRRVAPVD GDDGIFQDFV IDPDNKWYRL
101: WTRFILVWAV YSSFFTPLEF GFFRGLPRNL FFLDIAGQIA FLIDIVLRFF VAYRDPDTYR MVHNPTSIAL RYCKSSFIFD LLGCFPWDAI YKACGSKEEV
201: RYLLWIRLTR AMKVTEFFRS MEKDIRINYL FTRIVKLIVV ELYCTHTAAC IFYYLATTLP ESMEGYTWIG SLQLGDYSYS HFREIDLTKR YMTSLYFAIV
301: TMATVGYGDI HAVNVREMIF IMIYVSFDMI LGAYLIGNMT ALIVKGSRTE RFRDKMKEVI RYMNRNKLGK DIREQIKGHL RLQYESSYTE ASVLQDIPVS
401: IRAKISQTLY KPYIESIPLF KGCSAEFIQQ IVIRLQEEFF LPGEVILEQG SAVDQLYFVC HGALEGVGIG EDGQEETILM LEPESSFGEI AVLCNIPQPF
501: TVRVCELCRL LRLDKQSFTN ILEIFFVDGR RILSNLSESS EYGSRIKQLE SDITFHIGKQ EAELTLRVNN AAFYGDMHQL KSLIRAGADP KNTDYDGRSP
601: LHLAACKGFE DVVQFLLHEG VDIDLSDKFG NTPLLEAVKQ GHDRVATLLF SKGAKLSLEN AGSHLCTAVA RGDTDFVRRA LAYGGDPNAR DYDHRAPLHI
701: AAAEGLYLMA KLLVDAGASV FATDRWGTTP LDEGRRCGSR TMVQLLEAAK SGELSRYPER GEEVRDKMHP RRCSVFPHHP WDGGERRREG VVVWIPHTIE
801: GLVSSAQEKL GLAGSGEGLR LLGEDGARVL DVDMVHDGQK LYLVVGGGGD DGGTEARQ

Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [cytosol,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.