Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G203100.1 | Wheat | cytosol | 82.08 | 94.45 |
| TraesCS7A01G200100.1 | Wheat | cytosol | 82.29 | 94.35 |
| TraesCS7B01G106800.1 | Wheat | cytosol | 58.07 | 94.22 |
| HORVU7Hr1G040880.7 | Barley | cytosol, plasma membrane | 67.3 | 82.95 |
| HORVU7Hr1G040990.20 | Barley | endoplasmic reticulum, plasma membrane | 66.25 | 79.4 |
| KXG19708 | Sorghum | cytosol | 67.61 | 75.53 |
| Os06t0250600-01 | Rice | cytosol | 67.82 | 75.41 |
| Zm00001d037289_P002 | Maize | cytosol | 67.3 | 73.62 |
| Zm00001d044717_P001 | Maize | cytosol | 66.88 | 72.58 |
| GSMUA_Achr8P22950_001 | Banana | cytosol | 40.57 | 71.53 |
| GSMUA_Achr9P15840_001 | Banana | cytosol, mitochondrion, plasma membrane, vacuole | 57.13 | 64.5 |
| VIT_17s0000g01980.t01 | Wine grape | golgi, plasma membrane | 46.96 | 61.29 |
| Solyc03g097940.2.1 | Tomato | plasma membrane | 47.9 | 58.82 |
| VIT_11s0016g05810.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 49.69 | 56.7 |
| HORVU2Hr1G077680.12 | Barley | cytosol | 42.03 | 52.28 |
| KRH60563 | Soybean | mitochondrion, plasma membrane | 42.45 | 51.99 |
| HORVU3Hr1G072850.15 | Barley | plastid | 17.82 | 33.2 |
| HORVU3Hr1G068040.1 | Barley | plasma membrane | 14.68 | 32.71 |
| HORVU3Hr1G058300.1 | Barley | plasma membrane | 26.73 | 28.4 |
| HORVU3Hr1G028670.16 | Barley | plasma membrane | 20.44 | 27.5 |
| HORVU2Hr1G083820.1 | Barley | cytosol | 20.34 | 26.83 |
| HORVU1Hr1G065250.2 | Barley | plastid | 24.63 | 26.46 |
Protein Annotations
| Gene3D:1.10.287.630 | Gene3D:1.10.287.70 | Gene3D:1.25.40.20 | Gene3D:2.60.120.10 | MapMan:24.3.2.2 | UniProt:A0A287W6N2 |
| InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 |
| GO:GO:0005244 | GO:GO:0005249 | GO:GO:0005267 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006813 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0034765 | GO:GO:0055085 | GO:GO:0071805 | EnsemblPlantsGene:HORVU7Hr1G040970 | EnsemblPlants:HORVU7Hr1G040970.5 |
| InterPro:IPR000595 | InterPro:IPR002110 | InterPro:IPR014710 | InterPro:IPR020683 | InterPro:IPR021789 | InterPro:IPR036770 |
| InterPro:Ion_trans_dom | InterPro:KHA_dom | InterPro:K_chnl_volt-dep_EAG/ELK/ERG | PFAM:PF00027 | PFAM:PF00520 | PFAM:PF11834 |
| PFAM:PF12796 | PRINTS:PR01463 | PFscan:PS50042 | PFscan:PS50088 | PFscan:PS50297 | PFscan:PS51490 |
| PANTHER:PTHR10217 | PANTHER:PTHR10217:SF478 | InterPro:RmlC-like_jellyroll | SMART:SM00100 | SMART:SM00248 | SUPFAM:SSF48403 |
| SUPFAM:SSF51206 | SUPFAM:SSF81324 | TMHMM:TMhelix | UniParc:UPI000B47CBAC | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:112343412..112351892
Molecular Weight (calculated)
107550.0 Da
IEP (calculated)
8.142
GRAVY (calculated)
-0.210
Length
954 amino acids
Sequence
(BLAST)
(BLAST)
001: MCYMPSNRCD RSEWRHLNQS IDQKTKQPAP SLCCAVPSVA TGRPTDVSQA PRADLREAVV SSETRGTSLT IAIIKHKQPS LPSRAHLKVF SSSNHRHPAQ
101: LQNPSSAATA RRVVAAASSL VPMARGARSR RAPAGEEEAE KEYEVDVEPD RWKSSSSSRS SRLELMGRLP PLRRHSRIPG ADGDGEGGLL RGLVIHPDNK
201: LYRLWTRFIV GWAVYSSFVT PFEFGFFRGL PRKLFFLDIV GQVAFLIDIV LKFLVAYRDP DTYRIVYNPT SIALRYCKSS FIFDLLGCFP WDAIYKASGR
301: KEELRYLLWI RLTRVLKVRE FFTDLEKDIR VNYLFTRIVK LILVELYCTH TAACIFYYLA TTLPESVEGY TWIGSLQLGD YSYSHFREID LATRYVTSMY
401: FAIVTMATVG YGDIHAVNVR EMIFVMIYVS FDMVLGAYLI GNMTAMIVKG SATERFRDKM KEVIRYMNRN RLGKDIREQI KGHLRLQYES SCTEASVLRD
501: IPVSIRAKIS QTLYMPYIER TPLFKGCSEE FLQQIVIRLQ EEFFLPEEVI LEQGSAVDQL YFVCQGALEG VGIGEDGQET ILMLEQGNSF GEIAILCNIP
601: QPYTVRVCEL CRLLRLDKES FAHILEIYFA DGRKLLSNLT ESNEYGKRVK HVESDITFHI GKQEEELTLR VNNAAFYGDL HQLTGLIRAG ANPKNSDYDG
701: RSPLHLAACR GYEDVVRFLI HEGADINLTD KFGNTPLLEA VRQGHGRVAS ILFSKGAKLN LENAGSHLCI AVSKGDSDFI QGALAYGADP NSKDYDHRNP
801: LHIAAAEGLY IMAKLLVDAG ASVFAMDRRG TTPLDEGHKS GSKPLIMLLE QAKADELSKF PTRGEEVRDK MHTGRCSVFP YHPWNTDAKR KEGVMLWIPR
901: TINELIRSAQ EKLGLSSSCR RLLCQDGAAV QDVDMINDGQ KIYLVGDKDT GHSK
101: LQNPSSAATA RRVVAAASSL VPMARGARSR RAPAGEEEAE KEYEVDVEPD RWKSSSSSRS SRLELMGRLP PLRRHSRIPG ADGDGEGGLL RGLVIHPDNK
201: LYRLWTRFIV GWAVYSSFVT PFEFGFFRGL PRKLFFLDIV GQVAFLIDIV LKFLVAYRDP DTYRIVYNPT SIALRYCKSS FIFDLLGCFP WDAIYKASGR
301: KEELRYLLWI RLTRVLKVRE FFTDLEKDIR VNYLFTRIVK LILVELYCTH TAACIFYYLA TTLPESVEGY TWIGSLQLGD YSYSHFREID LATRYVTSMY
401: FAIVTMATVG YGDIHAVNVR EMIFVMIYVS FDMVLGAYLI GNMTAMIVKG SATERFRDKM KEVIRYMNRN RLGKDIREQI KGHLRLQYES SCTEASVLRD
501: IPVSIRAKIS QTLYMPYIER TPLFKGCSEE FLQQIVIRLQ EEFFLPEEVI LEQGSAVDQL YFVCQGALEG VGIGEDGQET ILMLEQGNSF GEIAILCNIP
601: QPYTVRVCEL CRLLRLDKES FAHILEIYFA DGRKLLSNLT ESNEYGKRVK HVESDITFHI GKQEEELTLR VNNAAFYGDL HQLTGLIRAG ANPKNSDYDG
701: RSPLHLAACR GYEDVVRFLI HEGADINLTD KFGNTPLLEA VRQGHGRVAS ILFSKGAKLN LENAGSHLCI AVSKGDSDFI QGALAYGADP NSKDYDHRNP
801: LHIAAAEGLY IMAKLLVDAG ASVFAMDRRG TTPLDEGHKS GSKPLIMLLE QAKADELSKF PTRGEEVRDK MHTGRCSVFP YHPWNTDAKR KEGVMLWIPR
901: TINELIRSAQ EKLGLSSSCR RLLCQDGAAV QDVDMINDGQ KIYLVGDKDT GHSK
001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET
Arabidopsis Description
SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane,vacuole,cytosol]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.