Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7D01G202900.1 | Wheat | plasma membrane | 89.66 | 84.84 |
TraesCS7A01G199900.1 | Wheat | cytosol | 89.92 | 81.98 |
TraesCS7B01G106600.1 | Wheat | cytosol | 76.49 | 80.65 |
HORVU7Hr1G040990.20 | Barley | endoplasmic reticulum, plasma membrane | 78.17 | 76.0 |
KXG19708 | Sorghum | cytosol | 76.49 | 69.32 |
Os06t0250600-01 | Rice | cytosol | 76.36 | 68.88 |
GSMUA_Achr8P22950_001 | Banana | cytosol | 47.42 | 67.84 |
Zm00001d037289_P002 | Maize | cytosol | 76.1 | 67.55 |
HORVU7Hr1G040970.5 | Barley | cytosol | 82.95 | 67.3 |
Zm00001d044717_P001 | Maize | cytosol | 75.45 | 66.44 |
VIT_17s0000g01980.t01 | Wine grape | golgi, plasma membrane | 56.85 | 60.19 |
GSMUA_Achr9P15840_001 | Banana | cytosol, mitochondrion, plasma membrane, vacuole | 64.86 | 59.41 |
Solyc03g097940.2.1 | Tomato | plasma membrane | 58.01 | 57.79 |
VIT_11s0016g05810.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 58.27 | 53.95 |
KRH60563 | Soybean | mitochondrion, plasma membrane | 51.81 | 51.48 |
HORVU2Hr1G077680.12 | Barley | cytosol | 46.77 | 47.2 |
HORVU3Hr1G072850.15 | Barley | plastid | 20.41 | 30.86 |
HORVU3Hr1G068040.1 | Barley | plasma membrane | 16.67 | 30.14 |
HORVU3Hr1G058300.1 | Barley | plasma membrane | 31.14 | 26.84 |
HORVU1Hr1G065250.2 | Barley | plastid | 30.36 | 26.46 |
HORVU2Hr1G083820.1 | Barley | cytosol | 24.55 | 26.28 |
HORVU3Hr1G028670.16 | Barley | plasma membrane | 23.26 | 25.39 |
Protein Annotations
Gene3D:1.10.287.630 | Gene3D:1.10.287.70 | Gene3D:1.25.40.20 | Gene3D:2.60.120.10 | MapMan:24.3.2.2 | UniProt:A0A287W6B1 |
InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 |
GO:GO:0005244 | GO:GO:0005249 | GO:GO:0005267 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006813 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 |
GO:GO:0016021 | GO:GO:0034765 | GO:GO:0055085 | GO:GO:0071805 | EnsemblPlantsGene:HORVU7Hr1G040880 | EnsemblPlants:HORVU7Hr1G040880.7 |
InterPro:IPR000595 | InterPro:IPR002110 | InterPro:IPR014710 | InterPro:IPR020683 | InterPro:IPR021789 | InterPro:IPR036770 |
InterPro:Ion_trans_dom | InterPro:KHA_dom | InterPro:K_chnl_volt-dep_EAG/ELK/ERG | PFAM:PF00027 | PFAM:PF00520 | PFAM:PF11834 |
PFAM:PF12796 | PFAM:PF13857 | PRINTS:PR01415 | PRINTS:PR01463 | PFscan:PS50042 | PFscan:PS50088 |
PFscan:PS50297 | PFscan:PS51490 | PANTHER:PTHR10217 | PANTHER:PTHR10217:SF478 | InterPro:RmlC-like_jellyroll | SMART:SM00100 |
SMART:SM00248 | SUPFAM:SSF48403 | SUPFAM:SSF51206 | SUPFAM:SSF81324 | TMHMM:TMhelix | UniParc:UPI000B468C3B |
InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:112132215..112143785
Molecular Weight (calculated)
87680.2 Da
IEP (calculated)
6.129
GRAVY (calculated)
-0.044
Length
774 amino acids
Sequence
(BLAST)
(BLAST)
001: LSRLADDGEG GFLRGHIVHP DNELYWLWTR FIVFWAAYSS FLTPLEFGFF RGLPRNLLLL DMVGQIAFLI DIVLRFLVAY RDSDTHRITY NPTSIAVRYC
101: KSSFIFDLLG CFPWDLIYKA CGHKEEVRYL LWIRLTRSLK VTQFFTDLEK DIRVNYLFTR IVKLIVVELF CTHTAACIFY YLATTLPESM EGYTWIGSLQ
201: LGDYSYSHFR EIDLTTRYIT SMYFAIVTMT TVGYGDIHAV NLKEMIFVMI YVSFDMLLGA YLVGNMTAII VKGSTTERFR DKMKEVIMYM NKHKLGKDIR
301: EQIKGHLRLQ YESSRTEASV LGDIPVSIRA KISQTLYMPY IERTPLFKGC SAEFLQQIVA RLQEEFYLPE EVVLEQGSAI DQLYFVCQGA LEGVGIGKDG
401: QEEASITFEQ GNSFGEIAIL CNIPQPYNVR VCELCRLLRL DKESLTYILG IYFSDGKKLL SNLTESNEYC QRVKQIGLDV TFHIGKQEEE LTLRVNTAAL
501: HGDLNQLAGL IRAGADPNNT DYNGRSPLHL AASKGYEDVA QFLIREGVDI NCTDQFGNTP LLEAVKQGHD RVASLLFAKG AKLNLENAGS HLCMAVSKRE
601: TDFIRGALAY GADPNSKDYD NRHPLHIAAA EGLYIMAKLL VDAGASVLVT DRRGTTPLDE GRMTGSKPLI MLLEQAKAEE LAKFPTRGEK VKDEVHQRLC
701: SVFPYHPWNT NVKRKEGVML WIPHTMSELI RSAQEKLGLS GPCLRLLCED GAAVQEVDMV IEGQKLYLVG DEDM
101: KSSFIFDLLG CFPWDLIYKA CGHKEEVRYL LWIRLTRSLK VTQFFTDLEK DIRVNYLFTR IVKLIVVELF CTHTAACIFY YLATTLPESM EGYTWIGSLQ
201: LGDYSYSHFR EIDLTTRYIT SMYFAIVTMT TVGYGDIHAV NLKEMIFVMI YVSFDMLLGA YLVGNMTAII VKGSTTERFR DKMKEVIMYM NKHKLGKDIR
301: EQIKGHLRLQ YESSRTEASV LGDIPVSIRA KISQTLYMPY IERTPLFKGC SAEFLQQIVA RLQEEFYLPE EVVLEQGSAI DQLYFVCQGA LEGVGIGKDG
401: QEEASITFEQ GNSFGEIAIL CNIPQPYNVR VCELCRLLRL DKESLTYILG IYFSDGKKLL SNLTESNEYC QRVKQIGLDV TFHIGKQEEE LTLRVNTAAL
501: HGDLNQLAGL IRAGADPNNT DYNGRSPLHL AASKGYEDVA QFLIREGVDI NCTDQFGNTP LLEAVKQGHD RVASLLFAKG AKLNLENAGS HLCMAVSKRE
601: TDFIRGALAY GADPNSKDYD NRHPLHIAAA EGLYIMAKLL VDAGASVLVT DRRGTTPLDE GRMTGSKPLI MLLEQAKAEE LAKFPTRGEK VKDEVHQRLC
701: SVFPYHPWNT NVKRKEGVML WIPHTMSELI RSAQEKLGLS GPCLRLLCED GAAVQEVDMV IEGQKLYLVG DEDM
001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET
Arabidopsis Description
SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [cytosol,plasma membrane,vacuole]
SUBAcon: [cytosol,plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.