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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane

Predictor Summary:
  • plasma membrane 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G202900.1 Wheat plasma membrane 89.66 84.84
TraesCS7A01G199900.1 Wheat cytosol 89.92 81.98
TraesCS7B01G106600.1 Wheat cytosol 76.49 80.65
HORVU7Hr1G040990.20 Barley endoplasmic reticulum, plasma membrane 78.17 76.0
KXG19708 Sorghum cytosol 76.49 69.32
Os06t0250600-01 Rice cytosol 76.36 68.88
GSMUA_Achr8P22950_001 Banana cytosol 47.42 67.84
Zm00001d037289_P002 Maize cytosol 76.1 67.55
HORVU7Hr1G040970.5 Barley cytosol 82.95 67.3
Zm00001d044717_P001 Maize cytosol 75.45 66.44
VIT_17s0000g01980.t01 Wine grape golgi, plasma membrane 56.85 60.19
GSMUA_Achr9P15840_001 Banana cytosol, mitochondrion, plasma membrane, vacuole 64.86 59.41
Solyc03g097940.2.1 Tomato plasma membrane 58.01 57.79
VIT_11s0016g05810.t01 Wine grape cytosol, endoplasmic reticulum, plasma membrane 58.27 53.95
KRH60563 Soybean mitochondrion, plasma membrane 51.81 51.48
HORVU2Hr1G077680.12 Barley cytosol 46.77 47.2
HORVU3Hr1G072850.15 Barley plastid 20.41 30.86
HORVU3Hr1G068040.1 Barley plasma membrane 16.67 30.14
HORVU3Hr1G058300.1 Barley plasma membrane 31.14 26.84
HORVU1Hr1G065250.2 Barley plastid 30.36 26.46
HORVU2Hr1G083820.1 Barley cytosol 24.55 26.28
HORVU3Hr1G028670.16 Barley plasma membrane 23.26 25.39
Protein Annotations
Gene3D:1.10.287.630Gene3D:1.10.287.70Gene3D:1.25.40.20Gene3D:2.60.120.10MapMan:24.3.2.2UniProt:A0A287W6B1
InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfGO:GO:0003674GO:GO:0005215GO:GO:0005216
GO:GO:0005244GO:GO:0005249GO:GO:0005267GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0034765GO:GO:0055085GO:GO:0071805EnsemblPlantsGene:HORVU7Hr1G040880EnsemblPlants:HORVU7Hr1G040880.7
InterPro:IPR000595InterPro:IPR002110InterPro:IPR014710InterPro:IPR020683InterPro:IPR021789InterPro:IPR036770
InterPro:Ion_trans_domInterPro:KHA_domInterPro:K_chnl_volt-dep_EAG/ELK/ERGPFAM:PF00027PFAM:PF00520PFAM:PF11834
PFAM:PF12796PFAM:PF13857PRINTS:PR01415PRINTS:PR01463PFscan:PS50042PFscan:PS50088
PFscan:PS50297PFscan:PS51490PANTHER:PTHR10217PANTHER:PTHR10217:SF478InterPro:RmlC-like_jellyrollSMART:SM00100
SMART:SM00248SUPFAM:SSF48403SUPFAM:SSF51206SUPFAM:SSF81324TMHMM:TMhelixUniParc:UPI000B468C3B
InterPro:cNMP-bd-likeInterPro:cNMP-bd_domSEG:seg:::
Description
No Description!
Coordinates
chrchr7H:+:112132215..112143785
Molecular Weight (calculated)
87680.2 Da
IEP (calculated)
6.129
GRAVY (calculated)
-0.044
Length
774 amino acids
Sequence
(BLAST)
001: LSRLADDGEG GFLRGHIVHP DNELYWLWTR FIVFWAAYSS FLTPLEFGFF RGLPRNLLLL DMVGQIAFLI DIVLRFLVAY RDSDTHRITY NPTSIAVRYC
101: KSSFIFDLLG CFPWDLIYKA CGHKEEVRYL LWIRLTRSLK VTQFFTDLEK DIRVNYLFTR IVKLIVVELF CTHTAACIFY YLATTLPESM EGYTWIGSLQ
201: LGDYSYSHFR EIDLTTRYIT SMYFAIVTMT TVGYGDIHAV NLKEMIFVMI YVSFDMLLGA YLVGNMTAII VKGSTTERFR DKMKEVIMYM NKHKLGKDIR
301: EQIKGHLRLQ YESSRTEASV LGDIPVSIRA KISQTLYMPY IERTPLFKGC SAEFLQQIVA RLQEEFYLPE EVVLEQGSAI DQLYFVCQGA LEGVGIGKDG
401: QEEASITFEQ GNSFGEIAIL CNIPQPYNVR VCELCRLLRL DKESLTYILG IYFSDGKKLL SNLTESNEYC QRVKQIGLDV TFHIGKQEEE LTLRVNTAAL
501: HGDLNQLAGL IRAGADPNNT DYNGRSPLHL AASKGYEDVA QFLIREGVDI NCTDQFGNTP LLEAVKQGHD RVASLLFAKG AKLNLENAGS HLCMAVSKRE
601: TDFIRGALAY GADPNSKDYD NRHPLHIAAA EGLYIMAKLL VDAGASVLVT DRRGTTPLDE GRMTGSKPLI MLLEQAKAEE LAKFPTRGEK VKDEVHQRLC
701: SVFPYHPWNT NVKRKEGVML WIPHTMSELI RSAQEKLGLS GPCLRLLCED GAAVQEVDMV IEGQKLYLVG DEDM
Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)
001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET
Arabidopsis Description
SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [cytosol,plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.