Factsheet for TraesCS7A01G199900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G106600.1	Wheat	cytosol	83.27	96.32
TraesCS7D01G202900.1	Wheat	plasma membrane	92.58	96.09
HORVU7Hr1G040880.7	Barley	cytosol, plasma membrane	81.98	89.92
TraesCS7A01G200100.1	Wheat	cytosol	78.45	80.05
TraesCS7A01G200200.1	Wheat	cytosol, plasma membrane, vacuole	75.38	76.37
KXG19708	Sorghum	cytosol	72.44	72.01
Os06t0250600-01	Rice	cytosol	72.32	71.56
Zm00001d037289_P002	Maize	cytosol	71.73	69.84
Zm00001d044717_P001	Maize	cytosol	70.79	68.37
GSMUA_Achr8P22950_001	Banana	cytosol	43.46	68.21
VIT_17s0000g01980.t01	Wine grape	golgi, plasma membrane	51.94	60.33
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	59.72	60.0
Solyc03g097940.2.1	Tomato	plasma membrane	53.36	58.3
VIT_11s0016g05810.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	54.18	55.02
KRH60563	Soybean	mitochondrion, plasma membrane	47.0	51.22
TraesCS2A01G312800.1	Wheat	plasma membrane	43.46	51.04
TraesCS3A01G294200.1	Wheat	mitochondrion, plasma membrane	19.43	33.0
TraesCS1A01G267900.1	Wheat	plastid	28.39	27.77
TraesCS3A01G233800.1	Wheat	plasma membrane	28.98	27.42
TraesCS3A01G132400.1	Wheat	plasma membrane	22.85	26.98
TraesCS6A01G160500.1	Wheat	plasma membrane	22.97	26.86
TraesCS3A01G245200.1	Wheat	mitochondrion	18.85	26.62
TraesCS2A01G321100.1	Wheat	plastid	26.62	24.78

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150
GO:GO:0016020	GO:GO:0055085	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683
InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027
PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PFAM:PF13857	PRINTS:PR01415	PRINTS:PR01463
PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF478
InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7A01G199900	EnsemblPlants:TraesCS7A01G199900.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	TIGR:cd00038
TIGR:cd00204	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:162532359..162537669

Molecular Weight (calculated)

96560.8 Da

IEP (calculated)

6.843

GRAVY (calculated)

-0.129

Length

849 amino acids

Sequence
(BLAST)

001: MFTETGQPAA RGLDRSSSSL TGIRRCVHAV QMGRWLGLNR RVGEEEEEAE KEYQVDVLPD RLKSSRSSRA PPPRSLSRLA DDGEGGFLRS HIVHPNNEWY
101: RIWTRFIVFW AAFSSFLTPL EFGFFRGLPW NLFLLDMVGQ IAFLIDIVLR FLVAYRDSDT FCIIYNPTSI AIRYCKSSFI FDLLGCFPWD VIYKACGRKE
201: EVRYLLWIRM TRTQKVTQFF RDLEKDIRVN YLFTRIVKLI VVELYFTHTA ACIFYYLATT LPESMEGCTW IGSLQLGDYS YSHFRDIDLT TRYITSMYFA
301: IVTMTTVGYG DIHAVNLREM IFVMIYVSFG MVLGAYLIGN MTAIVVKGSA TERFRDKMKE AIMYMNRHKL GKDIREQIKG HLRLQYESSR TEASVLRDIP
401: ISIRAKISQT LYMPYIERTP LFKGCSAEFL QQIVARLQEE FYLPEEVVLE QGSVVDQLYF VCQGALEGVG IGKDGQEEAS LMFEQGNSFG EIAILCNVPQ
501: PYNIRVCELC RLLRLDKESL TYILGIYFAD GRKLLSNLTE SNEYGLRVKQ IGPDIKFHIG KQEEELTLRV NTAAFHGELN QLTDLIRAGV DPKNTDYDGR
601: SPLHLAASKG YEEVAQFLIH EGVDINCTDN FGNTPLLEAV KRGHDRVASL LFSKGAKLNL ENAGIHLCMA VSKRETDFIR GALAYGADPN SKDYDHRHPL
701: HIAASEGLYI MAKLLVDAGA SVLVTDRRGT TPLDEGRKSG SKPLIVLLEE AKTEELSKFP TRGEKVRDKI HQRLCSVFPC HPLNIDAKRK EGVMLWIPHT
801: MNELIRSAQE KLGLSGSRLR LLCEDGAAVQ EVDMVIDGQK LYLVGDEDM

Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [cytosol,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.