Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G329800.1 | Wheat | plasma membrane | 97.79 | 97.79 |
| TraesCS2D01G311300.1 | Wheat | plasma membrane | 96.96 | 92.24 |
| HORVU2Hr1G077680.12 | Barley | cytosol | 95.44 | 89.96 |
| EES10868 | Sorghum | cytosol | 82.02 | 81.79 |
| Os04t0445000-01 | Rice | cytosol | 49.93 | 79.52 |
| Zm00001d003555_P001 | Maize | plasma membrane | 76.9 | 74.63 |
| GSMUA_Achr3P16730_001 | Banana | plasma membrane | 62.38 | 62.47 |
| VIT_18s0089g01300.t01 | Wine grape | plasma membrane | 62.1 | 61.51 |
| TraesCS7A01G200200.1 | Wheat | cytosol, plasma membrane, vacuole | 55.88 | 48.21 |
| TraesCS7A01G200100.1 | Wheat | cytosol | 54.91 | 47.72 |
| TraesCS7A01G199900.1 | Wheat | cytosol | 51.04 | 43.46 |
| TraesCS3A01G294200.1 | Wheat | mitochondrion, plasma membrane | 22.13 | 32.0 |
| TraesCS3A01G245200.1 | Wheat | mitochondrion | 21.72 | 26.12 |
| TraesCS3A01G233800.1 | Wheat | plasma membrane | 32.23 | 25.98 |
| TraesCS1A01G267900.1 | Wheat | plastid | 31.12 | 25.92 |
| TraesCS6A01G160500.1 | Wheat | plasma membrane | 25.31 | 25.21 |
| TraesCS2A01G321100.1 | Wheat | plastid | 30.15 | 23.9 |
| TraesCS3A01G132400.1 | Wheat | plasma membrane | 23.65 | 23.78 |
Protein Annotations
| Gene3D:1.10.287.70 | Gene3D:1.25.40.20 | Gene3D:2.60.120.10 | MapMan:24.3.2.2 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005249 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006813 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0055085 | InterPro:IPR000595 | InterPro:IPR002110 | InterPro:IPR014710 | InterPro:IPR020683 |
| InterPro:IPR036770 | InterPro:Ion_trans_dom | InterPro:K_chnl_volt-dep_EAG/ELK/ERG | PFAM:PF00027 | PFAM:PF00520 | PFAM:PF12796 |
| PRINTS:PR01415 | PRINTS:PR01463 | PFscan:PS50042 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR10217 |
| PANTHER:PTHR10217:SF478 | InterPro:RmlC-like_jellyroll | SMART:SM00100 | SMART:SM00248 | SUPFAM:SSF48403 | SUPFAM:SSF51206 |
| SUPFAM:SSF81324 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2A01G312800 | EnsemblPlants:TraesCS2A01G312800.1 | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom |
| TIGR:cd00038 | TIGR:cd00204 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:-:537404598..537407985
Molecular Weight (calculated)
81734.1 Da
IEP (calculated)
8.346
GRAVY (calculated)
0.004
Length
723 amino acids
Sequence
(BLAST)
(BLAST)
001: MEREIGPEYE LNEIDGGTLH GSVGSRLSLF AREFKWRSSS WHSSSALRLP NNCYGSSFVI DPNGRWYRMW SNMMFLWSIY SVFYTPFAFC FFRGIPEHLL
101: DLECVQLIFL ADVAVHFFLA YRDPHTHRVV YDQQRIALRY IKGSFALDML GCFPWDAVYK FTGRMEVVRY LVWLRLYRAR KIQGFFKKME KDIRISYLFT
201: RIAKLATVEL YCTHTAACVF YYLATTLPPA REGGTWIGSL AMGDQSYINF RKVDLLTRYI TSLYLAIVTM ATVGYGDVHA VNPREMVFIV VYVSFSMLLG
301: AYLIGNMTAL IVKGSRTERF RDKMTELIRY MNRNRLCSDI SSQVKAHLLL QYESSYKRDR IIDDIPAAVR SKTLYLETVS KVHLFRGCSE DFLSQIVVKI
401: QEEFFLPGEV ILEQGTVVDQ IYIVAHGCLE EFAAAGEGGS EEIVSELLPY DIVGDVAVIC NTRQPYTVRV SELCSLLRID KQSLTSILQM YLKDSRQILS
501: NLLKGKRTES KGKQLESDIT YLIAKQEADM VLGVNNAAYH GDLFRLKGLI GAGADPSKPD YDGRTSLHVA ASRGYEDIVR FLIQRGANVN SIDKSGKSPL
601: LQAVKSGHER IISLLVAHGA ALNLEDAGGY LCRVVAQGKI DLLRRLLRFG IDPNCRNYDR RTPLHVAASE GLHLVAGMLV EFGADLVAAD RWGNTPLDEA
701: QRCGCKPLVR ILEQARAAAA ADH
101: DLECVQLIFL ADVAVHFFLA YRDPHTHRVV YDQQRIALRY IKGSFALDML GCFPWDAVYK FTGRMEVVRY LVWLRLYRAR KIQGFFKKME KDIRISYLFT
201: RIAKLATVEL YCTHTAACVF YYLATTLPPA REGGTWIGSL AMGDQSYINF RKVDLLTRYI TSLYLAIVTM ATVGYGDVHA VNPREMVFIV VYVSFSMLLG
301: AYLIGNMTAL IVKGSRTERF RDKMTELIRY MNRNRLCSDI SSQVKAHLLL QYESSYKRDR IIDDIPAAVR SKTLYLETVS KVHLFRGCSE DFLSQIVVKI
401: QEEFFLPGEV ILEQGTVVDQ IYIVAHGCLE EFAAAGEGGS EEIVSELLPY DIVGDVAVIC NTRQPYTVRV SELCSLLRID KQSLTSILQM YLKDSRQILS
501: NLLKGKRTES KGKQLESDIT YLIAKQEADM VLGVNNAAYH GDLFRLKGLI GAGADPSKPD YDGRTSLHVA ASRGYEDIVR FLIQRGANVN SIDKSGKSPL
601: LQAVKSGHER IISLLVAHGA ALNLEDAGGY LCRVVAQGKI DLLRRLLRFG IDPNCRNYDR RTPLHVAASE GLHLVAGMLV EFGADLVAAD RWGNTPLDEA
701: QRCGCKPLVR ILEQARAAAA ADH
001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET
Arabidopsis Description
SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane,vacuole,cytosol]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.