Factsheet for TraesCS2D01G311300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 5
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G329800.1	Wheat	plasma membrane	93.03	97.79
TraesCS2A01G312800.1	Wheat	plasma membrane	92.24	96.96
HORVU2Hr1G077680.12	Barley	cytosol	91.84	91.0
EES10868	Sorghum	cytosol	77.89	81.66
Os04t0445000-01	Rice	cytosol	47.63	79.74
Zm00001d003555_P001	Maize	plasma membrane	72.37	73.83
GSMUA_Achr3P16730_001	Banana	plasma membrane	59.47	62.6
VIT_18s0089g01300.t01	Wine grape	plasma membrane	59.08	61.51
TraesCS7D01G203200.1	Wheat	cytosol, plasma membrane, vacuole	53.16	49.15
TraesCS7D01G203100.1	Wheat	cytosol	51.45	47.17
TraesCS7D01G202900.1	Wheat	plasma membrane	48.42	44.99
TraesCS3D01G294000.1	Wheat	mitochondrion, plasma membrane	21.18	32.07
TraesCS3D01G246300.1	Wheat	plastid	21.05	26.89
TraesCS3D01G219600.1	Wheat	plasma membrane	30.79	26.09
TraesCS1D01G267800.1	Wheat	plastid	29.61	26.01
TraesCS6D01G152200.1	Wheat	plasma membrane	23.55	24.66
TraesCS2D01G342500.1	Wheat	mitochondrion, plastid	28.95	24.36
TraesCS3D01G148600.1	Wheat	plasma membrane	22.76	24.06

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150
GO:GO:0016020	GO:GO:0055085	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683
InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520	PFAM:PF12796
PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR10217
PANTHER:PTHR10217:SF478	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206
SUPFAM:SSF81324	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G311300	EnsemblPlants:TraesCS2D01G311300.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom
TIGR:cd00038	TIGR:cd00204	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:-:400054716..400058375

Molecular Weight (calculated)

86108.5 Da

IEP (calculated)

8.629

GRAVY (calculated)

-0.024

Length

760 amino acids

Sequence
(BLAST)

001: MFDHICIYMY SVMCLHWTAQ SNTFNTRKLL ILERERSGEG MEREIGAEYE LNEIDGGTLH GSVGSRLSLF AREFKWRSSS SALRLPNNCY GSSFVIDPNG
101: RWYRMWSNMM FLWSIYSVFY TPFAFCFFRG IPEHLLDLEC VQLIFLADVA VHFFLAYRDP HTHRVVYDQQ RIALRYIKGS FALDMLGCFP WDAVYKFTGR
201: MEVVRYLVWL RLYRARKIQG FFKKMEKDIR ISYLFTRIAK LATVELYCTH TAACVFYYLA TTLPPAREGG TWIGSLTMGD QSYINFRKVD LLTRYITSLY
301: LAIVTMATVG YGDVHAVNPR EMVFIVGYVS FSMLLGAYLI GNMTALIVKG SRTERFRDKM TELIRYMNRN RLSSDIRSQV KAHLLLQYES SYKRDRIVDD
401: IPAAVRSKTL YLDTVSKVHL FRGCSEDFLS QIVVKIQEEF FLPGEVILEQ GTVVDQIYIV AHGCLEEIAA AREGGSEEIV SELLPYDIVG DVAVICNTRQ
501: PYTVRASELC SLLRIDKQSL TGILQMYLKD SRQILSNLLK GKRTESKGKQ LESDITYLIA KQEADLVLGV NNAAYHGDLF RLKGLIGAGA DPSKPDYDGR
601: TSLHVAASRG YEDIVRFLIK RGANVNSIDK SGKSPLLQAV KSGHERIISL LVAHGAALNL EDAGGYLCRV VAQGKIDLLR RLLRFGIDPN CRNYDRRTPL
701: HVAASEGLHL VAGMLVEFGA DIAATDRWGN TPLDEARRCG CKPLVRILEQ ARAAAAPADQ

Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.