Factsheet for TraesCS7D01G203100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G106800.1	Wheat	cytosol	68.03	95.92
TraesCS7A01G200100.1	Wheat	cytosol	95.66	95.31
TraesCS7D01G202900.1	Wheat	plasma membrane	81.18	82.27
HORVU7Hr1G040970.5	Barley	cytosol	94.45	82.08
TraesCS7D01G203200.1	Wheat	cytosol, plasma membrane, vacuole	80.7	81.39
KXG19708	Sorghum	cytosol	78.17	75.88
Os06t0250600-01	Rice	cytosol	78.41	75.76
Zm00001d037289_P002	Maize	cytosol	78.05	74.2
Zm00001d044717_P001	Maize	cytosol	77.56	73.15
GSMUA_Achr8P22950_001	Banana	cytosol	47.17	72.27
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	65.62	64.38
VIT_17s0000g01980.t01	Wine grape	golgi, plasma membrane	54.52	61.83
Solyc03g097940.2.1	Tomato	plasma membrane	54.64	58.3
VIT_11s0016g05810.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	57.42	56.94
KRH60563	Soybean	mitochondrion, plasma membrane	48.97	52.12
TraesCS2D01G311300.1	Wheat	plasma membrane	47.17	51.45
TraesCS3D01G294000.1	Wheat	mitochondrion, plasma membrane	20.99	34.66
TraesCS3D01G246300.1	Wheat	plastid	21.59	30.08
TraesCS1D01G267800.1	Wheat	plastid	29.67	28.44
TraesCS3D01G148600.1	Wheat	plasma membrane	24.37	28.09
TraesCS3D01G219600.1	Wheat	plasma membrane	29.79	27.54
TraesCS6D01G152200.1	Wheat	plasma membrane	23.64	27.0
TraesCS2D01G342500.1	Wheat	mitochondrion, plastid	27.74	25.47

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710
InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG
PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PRINTS:PR01415	PRINTS:PR01463
PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF478
InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G203100	EnsemblPlants:TraesCS7D01G203100.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	TIGR:cd00038
TIGR:cd00204	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:161393671..161399510

Molecular Weight (calculated)

94284.7 Da

IEP (calculated)

6.478

GRAVY (calculated)

-0.158

Length

829 amino acids

Sequence
(BLAST)

001: MVRGARSRRP PAGEEDAEKE YEVDVEPDRW KSSSRNSRLE LMGRLPPLRR LSRIPGADAD AEGGFLRGLV IHPDNKLYRS WTRFIVGWAV YSSFLTPFEF
101: AFFMGLPRKL FFLDIVGQVA FLIDIVLKFL VAYRDPDTYR IVYNPTSIAL RYCKSSFIFD LLGCFPWDAI YKVSGHKELR YLLWIRLTRV LKVREFFTDL
201: EKDIRVNYLF TRIVKLIVVE LYCTHTAACI FYYLATTLPE SMEGYTWIGS LQLGDYSYSH FREIDLATRY VTSMYFAVVT MTTVGYGDIH AVNVREMIFV
301: MIYVSFDMVL GAYLIGNMTA MIVKGSATER FRDKMKEVIR YMNRNRLGKD IREQIKGHLR LQYESSCTEA SVLRDIPVSI RAKISQTLYM PYIEKTPLFK
401: GCSEEFLQQI VIRLQEEFFL PEEVILEQGS AVDQLYFVCQ GALEGVGIGE DGQETILMLE QGNSFGEIAI LCNIPQPYTV RVCELCRLLR LDKESFAHIL
501: EIYFADGRKL LSNLTESNEY GKRVKHVESD ITFHIGKQEE ELTLRVNNAA FYGDLHQLTG LIRAGANPKN TDYDGRSPLH LAASKGYEDV VHFLIHEGTD
601: INLTDKFGNT PLLEAVKQGH ERVATLLFSK GAKLNLENAG SHLCIAVSKG DSDFIRGALA YGSDPDSKDY DHRTPLHIAA AEGFYIMAKL LVDAGASVLA
701: TDRRGTTPLD EGHKSGSKPL IMLLEQAKVD ELSKFPTRGE EVRDKMHTRR CSVFPYHPWD TDAKRKEGVM LWIPHTINEL IRSAQEKLGL SSSCLRLLCQ
801: DGATVQDVDM VNDGQKLYLV GDKDMGDSE

Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [cytosol,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.