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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d037289_P002 Maize cytosol 93.79 91.86
Zm00001d044717_P001 Maize cytosol 94.15 91.47
TraesCS7B01G106900.1 Wheat cytosol, plasma membrane, vacuole 82.55 84.43
Os06t0250600-01 Rice cytosol 84.78 84.38
TraesCS7A01G200200.1 Wheat cytosol, plasma membrane, vacuole 82.67 84.25
TraesCS7D01G203200.1 Wheat cytosol, plasma membrane, vacuole 81.03 84.18
HORVU7Hr1G040990.20 Barley endoplasmic reticulum, plasma membrane 76.23 81.78
TraesCS7B01G106800.1 Wheat cytosol 54.68 79.42
TraesCS7D01G203100.1 Wheat cytosol 75.88 78.17
TraesCS7A01G200100.1 Wheat cytosol 76.11 78.12
HORVU7Hr1G040880.7 Barley cytosol, plasma membrane 69.32 76.49
GSMUA_Achr8P22950_001 Banana cytosol 48.01 75.79
TraesCS7D01G202900.1 Wheat plasma membrane 71.9 75.06
TraesCS7B01G106600.1 Wheat cytosol 63.7 74.11
TraesCS7A01G199900.1 Wheat cytosol 72.01 72.44
HORVU7Hr1G040970.5 Barley cytosol 75.53 67.61
GSMUA_Achr9P15840_001 Banana cytosol, mitochondrion, plasma membrane, vacuole 66.63 67.34
VIT_17s0000g01980.t01 Wine grape golgi, plasma membrane 54.33 63.47
Solyc03g097940.2.1 Tomato plasma membrane 56.67 62.29
EES10868 Sorghum cytosol 50.23 59.17
VIT_11s0016g05810.t01 Wine grape cytosol, endoplasmic reticulum, plasma membrane 57.85 59.09
KRH60563 Soybean mitochondrion, plasma membrane 49.3 54.04
EES01496 Sorghum mitochondrion, plasma membrane 20.26 32.64
KXG22060 Sorghum cytosol, endoplasmic reticulum, plasma membrane 23.77 29.21
EES19575 Sorghum plastid 28.22 28.79
KXG22064 Sorghum plastid 27.63 28.03
EES03354 Sorghum plastid 29.04 28.02
EES06576 Sorghum plasma membrane 23.65 27.71
KXG22062 Sorghum plastid 5.15 27.67
OQU87429 Sorghum mitochondrion 20.14 27.52
EER95927 Sorghum plastid 27.87 25.9
EES07044 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 17.33 24.63
Protein Annotations
Gene3D:1.10.287.630Gene3D:1.10.287.70Gene3D:1.25.40.20Gene3D:2.60.120.10MapMan:24.3.2.2UniProt:A0A194YID1
InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfGO:GO:0003674GO:GO:0005215GO:GO:0005216
GO:GO:0005244GO:GO:0005249GO:GO:0005267GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0034765GO:GO:0055085GO:GO:0071805InterPro:IPR000595InterPro:IPR002110
InterPro:IPR014710InterPro:IPR020683InterPro:IPR021789InterPro:IPR036770InterPro:Ion_trans_domInterPro:KHA_dom
EnsemblPlants:KXG19708ProteinID:KXG19708ProteinID:KXG19708.1InterPro:K_chnl_volt-dep_EAG/ELK/ERGPFAM:PF00027PFAM:PF00520
PFAM:PF11834PFAM:PF12796PRINTS:PR01415PRINTS:PR01463PFscan:PS50042PFscan:PS50088
PFscan:PS50297PFscan:PS51490PANTHER:PTHR10217PANTHER:PTHR10217:SF478InterPro:RmlC-like_jellyrollSMART:SM00100
SMART:SM00248EnsemblPlantsGene:SORBI_3010G102800SUPFAM:SSF48403SUPFAM:SSF51206SUPFAM:SSF81324TMHMM:TMhelix
UniParc:UPI0007F2606FInterPro:cNMP-bd-likeInterPro:cNMP-bd_domSEG:seg::
Description
hypothetical protein
Coordinates
chr10:-:9571240..9577503
Molecular Weight (calculated)
97271.1 Da
IEP (calculated)
6.262
GRAVY (calculated)
-0.150
Length
854 amino acids
Sequence
(BLAST)
001: MGRGPLGSKR RVAEGETEPE EEEEESAAEY EVEEVRDHIA SSRGSRLALF GSDLRLGRFR PRRRTRRRLL AGEVGAVEGF FHDLVIHPDN KWYRLWTKFI
101: LVWAVYSSFF TPLEFGFYRG LPKNLFFLDI AGQIAFLIDI VVKFFVAYRD PDTYRIVYNP TAIALRYCKS SFIFDLLGCF PWDVIYKACG SKEEVRYLLW
201: IRLTRVTKIT EFFWRLEKDI RVNYLFTRIV KLIVVELYCT HTAACIFYYL ATTLPESMEG YTWIGSLQLG DYKFTHFREI DLVTRYITSL YFAIVTMATV
301: GYGDIHAVNI REMIFIMIYV SFDMILGAYL IGNMTALIVK GSRTERFRDK MKEVIRYMNR NKLGKEIREQ IKGHLRLQYE SSYTEASVLQ DIPISIRAKI
401: SQTLYKPYIE SIPLFKGCSA EFIQQIVIRL QEEFFLPGEV ILEQGSAVDQ LYFVCHGALE GVGIGEDGQE ETLLMLEPES SFGEISILCN IPQPYTVRVC
501: ELCRLLRLDK QSFTNILEIY FVDGRRILSN LSESEYGGRV KQLESDITFH IGKQEAELTL RVNSAAFYGD LNQLKSLIRA GADPKNTDYD GRSPLHLAAS
601: RGYEDVVQFL INEGVDIDHT DQFGNTPLLE AVKQGHERVA ALLFTKGAKL NLKNAGSHLC TAVAKGDSDF IRRALAYGAD PNCRDYDHRT PLHIAAAEGL
701: YLIAKMLVEA GASVFATDRW GTTPLDEARK CGGRTLGALL EEARANELAM FPERGEEVRD KMHPRRCSVF PYHPWRAAGT GEERRRMEGV VLWIPHTIES
801: LVASAQEKLE LPGPASRLRL LCEDGARVLD VDMVNDGQKL YLVGGEDGDQ KDGQ
Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)
001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET
Arabidopsis Description
SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.