CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01496
EES03354
EES05697
EES06576
EES10997
EES11332
EES11334
EES19575
KXG22060
KXG22062
KXG22064
KXG24673
KXG26473
KXG27004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	EES03354	AT2G26650.1	15299147
AT5G46240.1	EES19575	AT4G22200.1	12034902
AT5G46240.1	KXG22060	AT4G22200.1	12034902
AT5G46240.1	KXG22062	AT4G22200.1	12034902
AT5G46240.1	KXG22064	AT4G22200.1	12034902
AT5G46240.1	EES19575	AT4G22200.1	15299147
AT5G46240.1	KXG22060	AT4G22200.1	15299147
AT5G46240.1	KXG22062	AT4G22200.1	15299147
AT5G46240.1	KXG22064	AT4G22200.1	15299147
AT5G46240.1	EES19575	AT4G22200.1	17085433
AT5G46240.1	KXG22060	AT4G22200.1	17085433
AT5G46240.1	KXG22062	AT4G22200.1	17085433
AT5G46240.1	KXG22064	AT4G22200.1	17085433
AT5G46240.1	EES05697	AT5G41160.1	15299147
AT5G46240.1	EES10997	AT5G41160.1	15299147
AT5G46240.1	EES11332	AT5G41160.1	15299147
AT5G46240.1	EES11334	AT5G41160.1	15299147
AT5G46240.1	KXG24673	AT5G41160.1	15299147
AT5G46240.1	KXG26473	AT5G41160.1	15299147
AT5G46240.1	KXG27004	AT5G41160.1	15299147
AT5G46240.1	EES01496	AT5G46240.1	11042178
AT5G46240.1	EES06576	AT5G46240.1	11042178
AT5G46240.1	EES01496	AT5G46240.1	15299147
AT5G46240.1	EES06576	AT5G46240.1	15299147
AT5G46240.1	EES01496	AT5G46240.1	17085433
AT5G46240.1	EES06576	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0756700-01	Rice	plasma membrane	79.62	84.06
TraesCS3D01G294000.1	Wheat	mitochondrion, plasma membrane	76.98	81.27
TraesCS3A01G294200.1	Wheat	mitochondrion, plasma membrane	76.42	81.0
TraesCS3B01G328800.1	Wheat	plasma membrane	77.17	80.99
HORVU3Hr1G072850.15	Barley	plastid	73.4	75.98
CDY03233	Canola	plasma membrane	61.89	50.0
Bra017567.1-P	Field mustard	plasma membrane	61.7	49.77
CDY35154	Canola	plasma membrane	61.7	49.77
AT5G46240.1	Thale cress	plasma membrane	62.45	48.89
CDY33464	Canola	cytosol, plasma membrane, plastid	60.38	48.05
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	60.0	47.75
CDY62359	Canola	cytosol, plasma membrane, plastid	59.81	47.6
CDX99479	Canola	plasma membrane	61.51	47.59
CDX78839	Canola	plasma membrane	61.13	47.37
Bra013296.1-P	Field mustard	plasma membrane	61.13	47.16
Zm00001d012717_P002	Maize	plasma membrane	90.75	46.65
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	60.19	45.06
Solyc02g070530.2.1	Tomato	nucleus	57.17	44.04
KRH44805	Soybean	plasma membrane	60.0	43.68
EES06576	Sorghum	plasma membrane	60.0	43.62
PGSC0003DMT400054339	Potato	plasma membrane	56.6	43.6
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	55.28	42.9
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	54.53	41.94
KRH21063	Soybean	plasma membrane	61.32	41.83
CDX76529	Canola	plasma membrane	56.04	41.71
Bra021012.1-P	Field mustard	plasma membrane	55.85	41.57
KRH11194	Soybean	plasma membrane	60.57	41.31
VIT_10s0003g03270.t01	Wine grape	plasma membrane	60.94	40.83
KRH58233	Soybean	cytosol, extracellular, plasma membrane	16.42	39.19
Solyc03g058900.1.1	Tomato	cytosol	13.58	36.92
CDY34066	Canola	endoplasmic reticulum, plasma membrane	41.13	36.03
OQU87429	Sorghum	mitochondrion	39.43	33.44
KXG22062	Sorghum	plastid	9.81	32.7
EES03354	Sorghum	plastid	53.77	32.2
EES07044	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	35.09	30.95
PGSC0003DMT400054318	Potato	nucleus	18.11	30.48
EES19575	Sorghum	plastid	45.28	28.67
KXG22064	Sorghum	plastid	45.09	28.38
EER95927	Sorghum	plastid	48.68	28.07
KXG22060	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	36.42	27.77
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.21	24.22
EES10868	Sorghum	cytosol	32.08	23.45
KXG19708	Sorghum	cytosol	32.64	20.26

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	EntrezGene:8072092	UniProt:C5XK80	EnsemblPlants:EES01496
ProteinID:EES01496	ProteinID:EES01496.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811
GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0042391	GO:GO:0055085	GO:GO:0071805	InterPro:IPR000595	InterPro:IPR014710	InterPro:Ion_trans_dom
InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520	PRINTS:PR01463	PFscan:PS50042	PANTHER:PTHR10217
PANTHER:PTHR10217:SF619	InterPro:RmlC-like_jellyroll	SMART:SM00100	EnsemblPlantsGene:SORBI_3003G300600	SUPFAM:SSF51206	SUPFAM:SSF81324
TMHMM:TMhelix	UniParc:UPI0001A84A24	RefSeq:XP_002456376.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:63161325..63164324

Molecular Weight (calculated)

61028.1 Da

IEP (calculated)

8.504

GRAVY (calculated)

-0.055

Length

530 amino acids

Sequence
(BLAST)

001: MARSSSRTVG SWARRLPCCD GDGRNRFSSG GNLSGDLLPS LGATAQAQQQ PPRLRRNLVS PYDPRYKVWE IFLILLVVYS AWICPLEFAF LRYLPRAPFI
101: VDDVVNGFFA VDIVLTFFVP YVDSKSYLLV DDHKKIAVRY LSTWFAFDVC STFPFQSISL LFNKHDHGLG LKFLNVLRLW RLRRVSSMFA RLEKDIRFNY
201: AVIRCTKLIS VTLFAIHCAG CINYLIADRY PDPRRTWIGA VMPDFREDGL WIRYVTSLYW SITTMTTTGY GDLHAENSRE MLFGIAYMLF NLWLTAYLIG
301: NMTNLVVHST SRTRDFRDMV QAASEFAARN QLPQQIEEQM LNHICLRFRT EGLKQQETLD ILPKAMRSSI SLYLFFPVVQ GSYLFKGVSS GFIQQLVTEM
401: QTEYFAPKED IMLQNDKPSD LYLLVSGAVD ILAFLDETEQ IYGKAAEGEL LGEVGVMSNK PQPFTFRTTK LSQILRIGRS KLMDIMQENG EDGQIIRVNF
501: QQKLRVEQRL YIAMHQDDPP VPAFERRMDP

Best Arabidopsis Sequence Match ( AT5G46240.1 )
(BLAST)

001: MSISWTRNFF ERFCVEEYNI DTIKQSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPRYR AWEMWLVLLV IYSAWICPFQ FAFITYKKDA IFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN

Arabidopsis Description

KAT1At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.