Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • plastid 3
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76529 Canola plasma membrane 81.82 69.52
CDX99479 Canola plasma membrane 71.9 63.5
CDX78839 Canola plasma membrane 71.57 63.3
AT4G18290.2 Thale cress mitochondrion, plasma membrane 69.42 59.32
CDY35154 Canola plasma membrane 57.19 52.66
CDY03233 Canola plasma membrane 56.69 52.29
CDY33464 Canola cytosol, plasma membrane, plastid 55.7 50.6
CDY62359 Canola cytosol, plasma membrane, plastid 55.37 50.3
Solyc02g070530.2.1 Tomato nucleus 49.92 43.9
PGSC0003DMT400054339 Potato plasma membrane 49.26 43.31
Os01t0756700-01 Rice plasma membrane 35.7 43.03
EES01496 Sorghum mitochondrion, plasma membrane 36.03 41.13
KRH44805 Soybean plasma membrane 49.42 41.07
GSMUA_Achr10P... Banana plasma membrane 44.46 40.94
GSMUA_Achr7P09360_001 Banana plasma membrane 43.97 40.92
TraesCS3D01G294000.1 Wheat mitochondrion, plasma membrane 33.72 40.64
TraesCS3A01G294200.1 Wheat mitochondrion, plasma membrane 33.55 40.6
TraesCS3B01G328800.1 Wheat plasma membrane 33.88 40.59
KRH21063 Soybean plasma membrane 51.74 40.28
VIT_10s0003g03270.t01 Wine grape plasma membrane 52.56 40.2
KRH11194 Soybean plasma membrane 51.07 39.77
PGSC0003DMT400024968 Potato cytosol, plasma membrane, vacuole 45.12 39.62
Solyc08g016500.2.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 44.63 39.53
Solyc03g058900.1.1 Tomato cytosol 12.56 38.97
Os01t0210700-02 Rice extracellular 38.51 38.77
GSMUA_Achr9P06470_001 Banana plasma membrane 45.62 38.23
GSMUA_Achr6P05630_001 Banana cytosol, nucleus, plasma membrane 42.81 38.03
GSMUA_Achr6P26910_001 Banana endoplasmic reticulum, peroxisome, plasma membrane 45.62 37.86
HORVU3Hr1G072850.15 Barley plastid 31.9 37.7
GSMUA_Achr2P09100_001 Banana plasma membrane, vacuole 45.62 37.1
GSMUA_Achr8P27260_001 Banana plasma membrane 43.97 36.69
EES06576 Sorghum plasma membrane 42.31 35.12
Os02t0245800-01 Rice plasma membrane 41.49 34.96
TraesCS6D01G152200.1 Wheat plasma membrane 41.82 34.85
TraesCS6B01G190900.1 Wheat plasma membrane 41.65 34.76
PGSC0003DMT400054318 Potato nucleus 18.02 34.6
TraesCS6A01G160500.1 Wheat plasma membrane 40.99 34.16
HORVU3Hr1G028670.16 Barley plasma membrane 39.83 33.99
TraesCS3A01G132400.1 Wheat plasma membrane 40.17 33.8
TraesCS3D01G148600.1 Wheat plasma membrane 39.83 33.52
TraesCS3B01G167100.1 Wheat plasma membrane 39.67 33.38
Zm00001d053446_P001 Maize plastid 41.82 33.38
Zm00001d016160_P001 Maize plasma membrane 36.86 32.04
PGSC0003DMT400024866 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 15.04 31.49
Zm00001d039386_P001 Maize plasma membrane 33.06 30.86
CDX68872 Canola plastid 30.91 28.73
CDX75267 Canola plastid 30.58 28.42
CDY13496 Canola plastid 30.41 28.05
CDX72366 Canola plastid 28.1 26.36
CDY35373 Canola cytosol, plasma membrane, vacuole 37.02 26.05
CDY55714 Canola cytosol, plasma membrane, vacuole 36.86 25.9
CDY11516 Canola cytosol 37.19 25.66
CDX79135 Canola plasma membrane 33.22 25.51
CDX76746 Canola cytosol 37.02 25.48
CDX68851 Canola plasma membrane 35.54 25.09
CDX75249 Canola plasma membrane 35.21 24.32
CDX82921 Canola cytosol 33.22 23.32
Zm00001d012717_P002 Maize plasma membrane 38.35 22.5
KRH58233 Soybean cytosol, extracellular, plasma membrane 7.11 19.37
CDY28715 Canola cytosol 23.97 17.47
CDY51528 Canola cytosol 23.8 17.37
CDX74231 Canola plasma membrane 23.47 17.13
CDX92017 Canola plasma membrane 23.31 17.01
CDY32059 Canola plasma membrane 22.15 16.38
CDX71184 Canola plasma membrane 19.34 15.94
CDY61287 Canola plasma membrane 11.74 13.4
CDY10020 Canola cytosol 6.12 10.85
Protein Annotations
Gene3D:2.60.120.10MapMan:24.3.2.2GO:A0A078H8E5UniProt:A0A078H8E5EnsemblPlants:CDY34066ProteinID:CDY34066
ProteinID:CDY34066.1GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00055967001InterPro:IPR000595
InterPro:IPR014710InterPro:IPR021789InterPro:KHA_domPFAM:PF00027PFAM:PF11834PFscan:PS50042
PFscan:PS51490PANTHER:PTHR10217PANTHER:PTHR10217:SF551InterPro:RmlC-like_jellyrollSMART:SM00100SUPFAM:SSF51206
SUPFAM:SSF81324TMHMM:TMhelixUniParc:UPI0004EE44ACInterPro:cNMP-bd-likeInterPro:cNMP-bd_domSEG:seg
Description
BnaC03g62660DBnaC03g62660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8E5]
Coordinates
chrLK032327:-:333848..349467
Molecular Weight (calculated)
69523.2 Da
IEP (calculated)
8.584
GRAVY (calculated)
-0.113
Length
605 amino acids
Sequence
(BLAST)
001: MFLFFTMSSP QTLSISCTRN FLERFCVEGY NMDSMKHNSF LSADLLPSLG ASINDLAKLR KHIVSPVDPR FRCLLPLDTP LAWEMWLVIL VIYSAWICPF
101: EFAFITSKKH AIFIFILRAL RDAMRYLSTW FVFDVCPTAP FKSLSLLFNY KGSQIGFTVL STLRLWRLRR VSLLFARLEK DIRFNYFWTR CTKLILVKML
201: SSVLYMLFYL GFTSYLIGNM TNLVVHWSSH TKAFRDTVTS VSEFASRNQL PPNIHDQMLS HISLDFKTEG LKQEETLNGL RKATRSSIAC WIKLEDYLRN
301: NQNVYLFQGV SHNFLFQLVS AIDAEYFPPR EDVIIQNESH TDHYILVSGA VEFTAYIDGE NQIQGKEVVG DAFGEIGVLC YTPQPFTIST TELSQILRVH
401: KKSLISVMRA HIEDGRIIIN NLFMKLRGKQ SIAIDVAKHQ PHFLLQEWLG GGLKRGEGNA SDQGKGHKYL QLDDSEIIDL ELTKWMDSRK DGSSETRRGQ
501: EPNKDFAEKS FSNVDVASLK LTYPHCRFKP SKQELAKPEE KRVTIHLKSQ GKDLPKLIIL HDSKVELLGL AGEKFGKQSF TVVTNAENVE IDVIRDGEHL
601: FFHYQ
Best Arabidopsis Sequence Match ( AT2G25600.1 )
(BLAST)
001: MEKKKVWFWG VKDDGEGGGG RGGGRTKDAE DDVADHLSRD GTMSQYSLSK GLLPSLGANN RSSRDVILPR FIVSPFDPRY RAWETFLVFL VLYTAWASPF
101: EFGFLQKPRP PLSILDNIVN GFFAVDIVLT FFVAFLDKVT YLLVDDPKRI AWRYASTWLI FDVVSTFPYE IFGSLLHESI QGYGIFSMLR LWRLRRVSNC
201: FARLEKDRKY SYFWVRCSKL LLVTLFVIHC GACFLYSIAA HYPDPSKTFM ALTDENWKES PIAVRYNTAM YWSITTFSTT GYGDIHGVNS REMTFILFYM
301: VFNLGLSAYI IGNMTNLVVH VTGRTRKFRD TIQAASGFGQ RNNLPVRLQD QMVAHLCLRY RTDSEGLQQQ EIIDSLPKAI RSSISHYLFY EVVDKIYLFH
401: GISNDLLFQL VTEMKAEYFP PKEDVILQNE APTDFYILVT GAVDIIARVN GVEQVVSEAQ RGHVFGEVGV LCYRPQLFTV RTKRLSQLLR LNRTVLLNLV
501: QANVGDGAII MNNLLQHLKD SEDPVMKGVL ADTEHMLAQG KMDLPLSLCF AAARGDDLLL HQLLRRGSSP NEMDKDGRTA LHIAASKGSH YCVVLLLEHG
601: ADPNIRDSEG NVPLWEAIIG RHREIAKLLA ENGAKLSLDS VSYFSGLAVE KNCLDALKDI IKYGGDVTLP DGNGTTALHR AVSEGHLEIV KFLLDQGADL
701: DWPDSYGWTP RGLADHQGNE EIKTLFHNHR PVEKKPKPIP GIPQSPVTGK PLMKYSSEPT MHSGELVLDG GQVVVSQKRK LNNFRNSLFG IISAANSADD
801: GGEVPRSPAV PGGGGSMIYP ERVTISSPEN GETGGKVVLL PNSMEELLKI GENKMGFVPT KVLTREGAEI DDITLIRDGD FLLLSRDP
Arabidopsis Description
AKT6Potassium channel AKT6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXE6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.