Factsheet for Zm00001d053446_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002514_P001
Zm00001d002515_P001
Zm00001d003417_P001
Zm00001d010209_P001
Zm00001d010210_P001
Zm00001d011473_P003
Zm00001d012717_P002
Zm00001d016160_P001
Zm00001d026042_P001
Zm00001d038252_P001
Zm00001d039386_P001
Zm00001d044056_P003
Zm00001d051504_P001
Zm00001d053446_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	Zm00001d011473_P003	AT2G26650.1	15299147
AT5G46240.1	Zm00001d044056_P003	AT2G26650.1	15299147
AT5G46240.1	Zm00001d010209_P001	AT4G22200.1	12034902
AT5G46240.1	Zm00001d010210_P001	AT4G22200.1	12034902
AT5G46240.1	Zm00001d038252_P001	AT4G22200.1	12034902
AT5G46240.1	Zm00001d010209_P001	AT4G22200.1	15299147
AT5G46240.1	Zm00001d010210_P001	AT4G22200.1	15299147
AT5G46240.1	Zm00001d038252_P001	AT4G22200.1	15299147
AT5G46240.1	Zm00001d010209_P001	AT4G22200.1	17085433
AT5G46240.1	Zm00001d010210_P001	AT4G22200.1	17085433
AT5G46240.1	Zm00001d038252_P001	AT4G22200.1	17085433
AT5G46240.1	Zm00001d002514_P001	AT5G41160.1	15299147
AT5G46240.1	Zm00001d002515_P001	AT5G41160.1	15299147
AT5G46240.1	Zm00001d003417_P001	AT5G41160.1	15299147
AT5G46240.1	Zm00001d026042_P001	AT5G41160.1	15299147
AT5G46240.1	Zm00001d051504_P001	AT5G41160.1	15299147
AT5G46240.1	Zm00001d012717_P002	AT5G46240.1	11042178
AT5G46240.1	Zm00001d016160_P001	AT5G46240.1	11042178
AT5G46240.1	Zm00001d039386_P001	AT5G46240.1	11042178
AT5G46240.1	Zm00001d053446_P001	AT5G46240.1	11042178
AT5G46240.1	Zm00001d012717_P002	AT5G46240.1	15299147
AT5G46240.1	Zm00001d016160_P001	AT5G46240.1	15299147
AT5G46240.1	Zm00001d039386_P001	AT5G46240.1	15299147
AT5G46240.1	Zm00001d053446_P001	AT5G46240.1	15299147
AT5G46240.1	Zm00001d012717_P002	AT5G46240.1	17085433
AT5G46240.1	Zm00001d016160_P001	AT5G46240.1	17085433
AT5G46240.1	Zm00001d039386_P001	AT5G46240.1	17085433
AT5G46240.1	Zm00001d053446_P001	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06576	Sorghum	plasma membrane	86.15	89.57
Zm00001d016160_P001	Maize	plasma membrane	78.36	85.34
Os02t0245800-01	Rice	plasma membrane	70.45	74.37
TraesCS6B01G190900.1	Wheat	plasma membrane	70.71	73.93
TraesCS6D01G152200.1	Wheat	plasma membrane	70.05	73.14
TraesCS6A01G160500.1	Wheat	plasma membrane	70.05	73.14
GSMUA_Achr10P...	Banana	plasma membrane	52.11	60.12
GSMUA_Achr7P09360_001	Banana	plasma membrane	50.53	58.92
CDY03233	Canola	plasma membrane	49.21	56.86
Bra017567.1-P	Field mustard	plasma membrane	48.94	56.47
CDY35154	Canola	plasma membrane	48.94	56.47
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	50.13	55.8
AT5G46240.1	Thale cress	plasma membrane	48.28	54.06
CDY33464	Canola	cytosol, plasma membrane, plastid	46.97	53.45
CDX99479	Canola	plasma membrane	48.28	53.43
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	46.83	53.3
CDY62359	Canola	cytosol, plasma membrane, plastid	46.83	53.3
CDX78839	Canola	plasma membrane	47.89	53.07
Bra013296.1-P	Field mustard	plasma membrane	48.02	52.98
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	48.28	51.69
Solyc02g070530.2.1	Tomato	nucleus	46.57	51.31
PGSC0003DMT400054339	Potato	plasma membrane	45.91	50.58
KRH44805	Soybean	plasma membrane	48.15	50.14
VIT_10s0003g03270.t01	Wine grape	plasma membrane	51.85	49.68
KRH21063	Soybean	plasma membrane	49.6	48.39
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	43.4	48.17
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	43.54	47.9
KRH11194	Soybean	plasma membrane	48.68	47.49
CDX76529	Canola	plasma membrane	44.46	47.33
Zm00001d039386_P001	Maize	plasma membrane	40.37	47.22
Bra021012.1-P	Field mustard	plasma membrane	44.33	47.19
CDY34066	Canola	endoplasmic reticulum, plasma membrane	33.38	41.82
KRH58233	Soybean	cytosol, extracellular, plasma membrane	12.01	40.99
Zm00001d010209_P001	Maize	plastid	7.39	40.0
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	32.06	37.97
Solyc03g058900.1.1	Tomato	cytosol	9.63	37.44
Zm00001d016987_P001	Maize	plasma membrane	29.02	37.35
Zm00001d011729_P002	Maize	cytosol	31.13	37.28
Zm00001d044056_P003	Maize	plasma membrane, plastid	43.54	37.2
Zm00001d011473_P003	Maize	plastid	41.69	34.61
Zm00001d010210_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	30.08	32.62
Zm00001d012717_P002	Maize	plasma membrane	43.8	32.2
PGSC0003DMT400054318	Potato	nucleus	13.32	32.06
Zm00001d018918_P001	Maize	plastid	38.26	31.22
Zm00001d038252_P001	Maize	plastid	37.99	30.84
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	11.08	29.07
Zm00001d037289_P002	Maize	cytosol	26.52	23.05
Zm00001d003555_P001	Maize	plasma membrane	22.43	22.82
Zm00001d044717_P001	Maize	cytosol	26.25	22.64
Zm00001d018924_P001	Maize	cytosol	8.44	14.35

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	EntrezGene:542145	UniProt:A0A1D6QPH6	ProteinID:AQK59466.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0034220	GO:GO:0055085	GO:GO:0071805	InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789
InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834
PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF551	InterPro:RmlC-like_jellyroll
SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI0004DEBD30	EnsemblPlantsGene:Zm00001d053446
EnsemblPlants:Zm00001d053446_P001	EnsemblPlants:Zm00001d053446_T001	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	:	:

Description

potassium channel3 potassium channel3

Coordinates

chr4:+:231900509..231904788

Molecular Weight (calculated)

86751.4 Da

IEP (calculated)

7.539

GRAVY (calculated)

-0.210

Length

758 amino acids

Sequence
(BLAST)

001: MPVTCSIYRS SLQPSTPSAC RVERQRKKKK TNMTQAHSKS CFQQFWDGVQ VKRNSGSFTI ELLPSLGATI NQSNKLRKFI ISPYDPCYRY WELFLIVLVI
101: YSAWICPFEL AFLRDLPSKL LLAENIVNGF FAVDIVLTFF VAYVDSKTHL LVDDQKRIAV RYLSTWFIFD VCSTAPFQPI SLLFTRKGNG LAFKILNMLR
201: LWRLHRVSSL FASRLEKDIR FNYFWTRCSK LISVTLFAVH CAGCFNYMIA DRYPDPEKTW IGAVMPTFRS ESLWARYVTA LYWSITTLTT TGYGDLHAEN
301: PREMLFDICY MLFNLGLTAY LIGNMTNLVV HGTSRTRSFR DSIQSASEFA SRNQLPDKIK QQMLSHFCLQ FKTEGLSQQA MLNCLPKGIR SGIAYNLFFT
401: IIRKAYLFHG VSNSFIAELV MEVQAEYFPP MEDIMLQNEA AADIYIIVSG VANLITTANG NEQVYEKVEE GDMFGEVGAL CDIPQPFTCR TTTLSQLLRI
501: RKIRLTEIMQ EHKEDSKILM NNLFQKLKLH ESLPELKQLD RRFMHKYELF HAPQEAWLLP QPYLQYTEHK LEDIGKKIPT FCGDHGSTKL AAETNQMRLT
601: QQGNSHDHGN YMATDGMAGE EGERNEVHIN CETKEVSIHI NSEDCDAASH WQTDHETVRL GSSHNTSDGI TMRENQDSSN IKSSNKRVTI HTYPRNAAGS
701: LVQNGKLINL PGSLDEIFEI GCQKFPGLRP TKLFSGDYAE IDDISVIRDG DHLFLLQM

Best Arabidopsis Sequence Match ( AT4G18290.2 )
(BLAST)

001: MLKRKHLNTR PMSISCTRNF FKRFCVEEYN MDTFKHSSFL SADLLPSLGA RINQSTKLRK HIISPFDPRF RGWEMWLVIL VIYSAWICPF EFAFITYKKD
101: ALFIIDNIVN GFFAIDIILT FFVAYLDSHS YLLVDKPKKI AIRYLSTWFA FDVCSTAPFQ SLSLLFKYNG SEIGFRVLSM LRLWRLRRVS SLFARLEKDI
201: RFNYFWTRCT KLISVTLFAV HCAGCFAYLI ADQYHDPTKT WIGAVYPNFK ETSVWSRYVT ALYWSITTLT TTGYGDLHAE NPREMLFFVF FMLFNLGFTS
301: YLIGNMTNLV VHWTSRTRNF RDTVRAASEF ASRNQLPPNI QDQMLSHICL KFKTEGLKQQ EALNGLPKAI RSSIANYLFF PIVQNVYLFH GVSRNFLFQL
401: VSDIDAEYFP PREDVILQNE APTDLYILVS GAVDFTVYVG EEDQVQGKAV VGDAFGEIGV LCYTPQPFTV RTTELSQILR ISKKSLMSAM RAHVEDGRVI
501: MNNLFMKLRG QQSIAIDDPN SEPESLLKEW LVGGSKTGEG NASDQGHGHK YLQLHDSENI DMGSTEWRDS RRSGYGETKR VREHTIEIEE GEKPNKEFDG
601: KGCSDADLTS FEFHSQEAYP YCRSNIQIKQ HEAAKPKDKR VTIHLKSRDK DLSKLIILPA SIEELLRLAG EKFGYSFTKV TNAENAEIDD EDVIRDGDHL
701: YILINENS

Arabidopsis Description

KAT2potassium channel in Arabidopsis thaliana 2 [Source:TAIR;Acc:AT4G18290]
SUBAcon: [plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.