Factsheet for Bra025028.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, endoplasmic reticulum

Predictor Summary:

nucleus 1
plasma membrane 3
vacuole 2
extracellular 1
golgi 1
endoplasmic reticulum 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane, vacuole
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra013599.1-P
Bra017567.1-P
Bra025028.1-P
Bra032037.1-P
Bra037874.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	Bra032037.1-P	AT2G26650.1	15299147
AT5G46240.1	Bra013599.1-P	AT4G22200.1	12034902
AT5G46240.1	Bra013599.1-P	AT4G22200.1	15299147
AT5G46240.1	Bra013599.1-P	AT4G22200.1	17085433
AT5G46240.1	Bra037874.1-P	AT5G41160.1	15299147
AT5G46240.1	Bra017567.1-P	AT5G46240.1	11042178
AT5G46240.1	Bra025028.1-P	AT5G46240.1	11042178
AT5G46240.1	Bra017567.1-P	AT5G46240.1	15299147
AT5G46240.1	Bra025028.1-P	AT5G46240.1	15299147
AT5G46240.1	Bra017567.1-P	AT5G46240.1	17085433
AT5G46240.1	Bra025028.1-P	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33464	Canola	cytosol, plasma membrane, plastid	98.95	98.95
Bra017567.1-P	Field mustard	plasma membrane	84.68	85.84
AT5G46240.1	Thale cress	plasma membrane	84.53	83.16
Bra013296.1-P	Field mustard	plasma membrane	72.52	70.31
Os01t0756700-01	Rice	plasma membrane	45.95	60.96
TraesCS3D01G294000.1	Wheat	mitochondrion, plasma membrane	45.35	60.16
EES01496	Sorghum	mitochondrion, plasma membrane	47.75	60.0
TraesCS3B01G328800.1	Wheat	plasma membrane	45.5	60.0
TraesCS3A01G294200.1	Wheat	mitochondrion, plasma membrane	45.05	60.0
Bra021012.1-P	Field mustard	plasma membrane	63.06	58.99
HORVU3Hr1G072850.15	Barley	plastid	44.89	58.4
KRH44805	Soybean	plasma membrane	63.36	57.97
Solyc02g070530.2.1	Tomato	nucleus	59.01	57.12
PGSC0003DMT400054339	Potato	plasma membrane	57.96	56.1
GSMUA_Achr10P...	Banana	plasma membrane	55.11	55.86
GSMUA_Achr7P09360_001	Banana	plasma membrane	53.9	55.23
VIT_10s0003g03270.t01	Wine grape	plasma membrane	65.47	55.12
KRH21063	Soybean	plasma membrane	64.11	54.95
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	55.71	54.32
KRH11194	Soybean	plasma membrane	63.21	54.18
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	55.71	53.85
Os01t0210700-02	Rice	extracellular	48.05	53.24
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	53.0	51.84
GSMUA_Achr6P26910_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	56.01	51.17
GSMUA_Achr8P27260_001	Banana	plasma membrane	54.8	50.34
GSMUA_Achr9P06470_001	Banana	plasma membrane	54.05	49.86
Os02t0245800-01	Rice	plasma membrane	53.0	49.16
EES06576	Sorghum	plasma membrane	53.45	48.83
GSMUA_Achr2P09100_001	Banana	plasma membrane, vacuole	54.35	48.66
TraesCS6A01G160500.1	Wheat	plasma membrane	52.85	48.48
TraesCS6D01G152200.1	Wheat	plasma membrane	52.7	48.35
TraesCS6B01G190900.1	Wheat	plasma membrane	52.4	48.14
HORVU3Hr1G028670.16	Barley	plasma membrane	50.15	47.11
TraesCS3B01G167100.1	Wheat	plasma membrane	50.75	47.01
TraesCS3D01G148600.1	Wheat	plasma membrane	50.6	46.87
TraesCS3A01G132400.1	Wheat	plasma membrane	50.6	46.87
Zm00001d053446_P001	Maize	plastid	53.3	46.83
Zm00001d016160_P001	Maize	plasma membrane	48.2	46.12
Solyc03g058900.1.1	Tomato	cytosol	13.21	45.13
Zm00001d039386_P001	Maize	plasma membrane	41.74	42.9
PGSC0003DMT400054318	Potato	nucleus	19.97	42.22
KRH58233	Soybean	cytosol, extracellular, plasma membrane	13.51	40.54
Bra037049.1-P	Field mustard	plastid	37.69	38.91
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	16.82	38.75
Bra011367.1-P	Field mustard	plastid	37.84	38.71
Bra032037.1-P	Field mustard	cytosol	48.05	37.21
Bra007785.1-P	Field mustard	cytosol	46.1	35.45
Bra011351.1-P	Field mustard	cytosol	45.2	34.36
Bra013599.1-P	Field mustard	cytosol	41.59	32.13
Zm00001d012717_P002	Maize	plasma membrane	49.1	31.72
Bra040606.1-P	Field mustard	cytosol, plasma membrane, vacuole	28.83	23.16
Bra001068.1-P	Field mustard	plasma membrane	26.13	22.83
Bra036395.1-P	Field mustard	cytosol	27.18	22.15
Bra021279.1-P	Field mustard	nucleus	14.86	17.31

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
EnsemblPlantsGene:Bra025028	EnsemblPlants:Bra025028.1	EnsemblPlants:Bra025028.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005249	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0055085	GO:GO:0071805	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683
InterPro:IPR021789	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M4E8C2	PFAM:PF00027
PFAM:PF00520	PFAM:PF11834	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297
PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF551	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248
SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI000253FBDA	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom
SEG:seg	:	:	:	:	:

Description

AT5G46240 (E=3e-287) KAT1 | KAT1 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 1); cyclic nucleotide binding / inward rectifier potassium channel

Coordinates

chrA06:+:24783607..24787229

Molecular Weight (calculated)

76207.4 Da

IEP (calculated)

6.508

GRAVY (calculated)

-0.153

Length

666 amino acids

Sequence
(BLAST)

001: MPISCTRNFF ERFCVEDYNI DNIKQSSFLS ADLLPSLGAR INHSTKLLIY SAWICPFQFA FITYKKDAIF IIDNIVNGFF AIDIVLTFFV AYLDSHSYLL
101: VDDPKKIAIR YLSTWFAFDV CSTAPFQPLS LLFNYNGSEL GFRILSMLRL WRLRRVSSLF ARLEKDIRFN YFWIRCTKLI SVTLFAVHCA GCFNYLIADR
201: YPEPRKTWIG AVYPDFKEAS LWNRYVTALC WSITTLTTTG YGDLHPDNPR EMLFDIFFMM FNLGLTAYLI GNMTNLVVHW TSRTRSFRDT VRAASEFASR
301: NQLPHDIQDQ MLSHICLKFK TEGLKQQETL NNLPKAIRSS IANYLFLPIV QNIYLFQGVS RDFLFQLVSD IDAEYFPPKE DIILQNEAPT DLYILVSGAV
401: DFASYVDGHD QIQGKAVIGD TFGEIGVLCY RPQPFTVRTT ELSQILRISR TSLMSAMHAH AEDGRVIMNN LFMKLRGQQS IGIDATNNDQ ENRDFQRMGW
501: EEWMDSRIDC KGSDVSNSTS DNGEKALMDA IHKGDIEMVK KLLKRGINIE EPKVLTEAKG GNSNSETKQR SNDSDQCCSS SIQAKVKDKR VTIHMLSQEK
601: DPQRHNGKLI LLPTSIEELL GLAGEKFGGC SFTKITNAEN ADIDDLCVIR DGDHLFFHQI EFEGRH

Best Arabidopsis Sequence Match ( AT5G46240.1 )
(BLAST)

001: MSISWTRNFF ERFCVEEYNI DTIKQSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPRYR AWEMWLVLLV IYSAWICPFQ FAFITYKKDA IFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN

Arabidopsis Description

KAT1At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.