Factsheet for GSMUA_Achr8P27260_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr2P09100_001
GSMUA_Achr3P20680_001
GSMUA_Achr4P08990_001
GSMUA_Achr4P09000_001
GSMUA_Achr5P09840_001
GSMUA_Achr5P12690_001
GSMUA_Achr6P05630_001
GSMUA_Achr6P07280_001
GSMUA_Achr6P24240_001
GSMUA_Achr6P26910_001
GSMUA_Achr7P09360_001
GSMUA_Achr8P27260_001
GSMUA_Achr9P06470_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	GSMUA_Achr3P20680_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr4P08990_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr4P09000_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr5P09840_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_AchrUn_...	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	12034902
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	12034902
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	15299147
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	15299147
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	17085433
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	17085433
AT5G46240.1	GSMUA_Achr10P...	AT5G41160.1	15299147
AT5G46240.1	GSMUA_Achr5P12690_001	AT5G41160.1	15299147
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P26910_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	72.69	72.29
GSMUA_Achr9P06470_001	Banana	plasma membrane	71.72	72.02
GSMUA_Achr2P09100_001	Banana	plasma membrane, vacuole	72.0	70.16
GSMUA_Achr7P09360_001	Banana	plasma membrane	54.34	60.62
GSMUA_Achr10P...	Banana	plasma membrane	53.93	59.51
CDY03233	Canola	plasma membrane	50.9	56.25
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	52.41	55.8
Bra017567.1-P	Field mustard	plasma membrane	50.48	55.71
CDY35154	Canola	plasma membrane	50.48	55.71
CDY33464	Canola	cytosol, plasma membrane, plastid	50.62	55.11
CDY62359	Canola	cytosol, plasma membrane, plastid	50.34	54.8
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	50.34	54.8
AT5G46240.1	Thale cress	plasma membrane	50.62	54.21
CDX78839	Canola	plasma membrane	50.9	53.95
CDX99479	Canola	plasma membrane	50.62	53.58
Bra013296.1-P	Field mustard	plasma membrane	50.76	53.57
Solyc02g070530.2.1	Tomato	nucleus	50.21	52.91
KRH44805	Soybean	plasma membrane	52.83	52.61
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	50.48	51.69
PGSC0003DMT400054339	Potato	plasma membrane	48.97	51.6
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	48.14	51.1
KRH21063	Soybean	plasma membrane	54.62	50.97
KRH11194	Soybean	plasma membrane	54.62	50.97
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	48.0	50.51
GSMUA_Achr4P09000_001	Banana	plasma membrane	38.62	50.09
VIT_10s0003g03270.t01	Wine grape	plasma membrane	53.66	49.18
CDX76529	Canola	plasma membrane	47.59	48.46
Bra021012.1-P	Field mustard	plasma membrane	47.45	48.31
Solyc03g058900.1.1	Tomato	cytosol	12.69	47.18
CDY34066	Canola	endoplasmic reticulum, plasma membrane	36.69	43.97
GSMUA_Achr1P05260_001	Banana	plasma membrane	37.1	42.5
KRH58233	Soybean	cytosol, extracellular, plasma membrane	12.69	41.44
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	45.1	40.72
GSMUA_Achr5P09770_001	Banana	plasma membrane	36.55	40.58
GSMUA_AchrUn_...	Banana	plasma membrane	43.31	39.7
GSMUA_Achr5P09840_001	Banana	plasma membrane	44.69	39.51
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	44.14	39.22
PGSC0003DMT400054318	Potato	nucleus	15.31	35.24
GSMUA_Achr6P24240_001	Banana	cytosol	38.76	35.12
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.93	34.95
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	38.76	34.1
GSMUA_Achr8P22960_001	Banana	nucleus, peroxisome, plasma membrane	10.9	26.33
GSMUA_Achr3P16730_001	Banana	plasma membrane	25.79	25.9
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	26.9	23.08
GSMUA_Achr8P22950_001	Banana	cytosol	16.97	22.74

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005216	GO:GO:0005249	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0055085	GO:GO:0071805	EnsemblPlantsGene:GSMUA_Achr8G27260_001	EnsemblPlants:GSMUA_Achr8P27260_001	EnsemblPlants:GSMUA_Achr8T27260_001	InterPro:IPR000595
InterPro:IPR014710	InterPro:IPR021789	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M0TU29
PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490
PANTHER:PTHR10217	PANTHER:PTHR10217:SF551	InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324
TMHMM:TMhelix	UniParc:UPI0002965F72	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:

Description

Potassium channel KAT1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G27260_001]

Coordinates

chr8:+:30484242..30487896

Molecular Weight (calculated)

84193.2 Da

IEP (calculated)

7.104

GRAVY (calculated)

-0.256

Length

725 amino acids

Sequence
(BLAST)

001: MFSCMNYLQH FCNDGFQLES GGFNLHDDLL PSLGATINHT TKLRKHIVSP YDPRYRLWEL FLIFLVLYSA WICPFEFAFL RYLPSKIFLV DNIVDSFFAI
101: DIVLTFFVAF MDHKSCLLVD DPKRIAVRYL STWFIFDACS TYPIQTISFS YNRHGNSLSF KLLSMLRLWR LRRVGSLFAR LEKDIRFNYF WTRCTKLFSV
201: TIFAVHCSGC FNYMIADRYP DPKRTWIGAV IPNFREDDLW LRYVTAIYWS ITTLTTTGYG DLHAENTREM LFDICYMFFN LGLMAYLIGN MTNLVVQGTS
301: RTKKFRDTIQ NASEFASRNK LPKYIEEQML SHICLRFKTQ ELKQQEILDD LPKAIRSSIA EHLFLPIVQN VYLFQGVASN TLFQMVTEMK AEYFPPKEDV
401: MLQNEAPTDL YVIVSGAVEM RTYADGIEKV HGSVTAGEIV GEIAVLCHMP QPFTVRTTEL TQILRLNRTI LFNIIHKSKQ DATIVMSNLL QKLRVHERLY
501: PGIKQNDSEL LQQWQEKIAM NRNENHDQDE NSYRVSNTLE EMDAGDLLCK AESNKDIRMD IQPPISCCNT KVDHADKRTV LHTAVWEGHN ETAKNYGSRE
601: WRTTTDHGNN FKHHSSREWR PRFPYPNISE MLVASCSHGG HEFENDVKNL TSKRVTIHMH SQRANPARQL TAKMINLPGT VEELLRIGGE KFVGHHPEKV
701: INQENAEIDD LSKVQDGDHL YLLEI

Best Arabidopsis Sequence Match ( AT2G25600.1 )
(BLAST)

001: MEKKKVWFWG VKDDGEGGGG RGGGRTKDAE DDVADHLSRD GTMSQYSLSK GLLPSLGANN RSSRDVILPR FIVSPFDPRY RAWETFLVFL VLYTAWASPF
101: EFGFLQKPRP PLSILDNIVN GFFAVDIVLT FFVAFLDKVT YLLVDDPKRI AWRYASTWLI FDVVSTFPYE IFGSLLHESI QGYGIFSMLR LWRLRRVSNC
201: FARLEKDRKY SYFWVRCSKL LLVTLFVIHC GACFLYSIAA HYPDPSKTFM ALTDENWKES PIAVRYNTAM YWSITTFSTT GYGDIHGVNS REMTFILFYM
301: VFNLGLSAYI IGNMTNLVVH VTGRTRKFRD TIQAASGFGQ RNNLPVRLQD QMVAHLCLRY RTDSEGLQQQ EIIDSLPKAI RSSISHYLFY EVVDKIYLFH
401: GISNDLLFQL VTEMKAEYFP PKEDVILQNE APTDFYILVT GAVDIIARVN GVEQVVSEAQ RGHVFGEVGV LCYRPQLFTV RTKRLSQLLR LNRTVLLNLV
501: QANVGDGAII MNNLLQHLKD SEDPVMKGVL ADTEHMLAQG KMDLPLSLCF AAARGDDLLL HQLLRRGSSP NEMDKDGRTA LHIAASKGSH YCVVLLLEHG
601: ADPNIRDSEG NVPLWEAIIG RHREIAKLLA ENGAKLSLDS VSYFSGLAVE KNCLDALKDI IKYGGDVTLP DGNGTTALHR AVSEGHLEIV KFLLDQGADL
701: DWPDSYGWTP RGLADHQGNE EIKTLFHNHR PVEKKPKPIP GIPQSPVTGK PLMKYSSEPT MHSGELVLDG GQVVVSQKRK LNNFRNSLFG IISAANSADD
801: GGEVPRSPAV PGGGGSMIYP ERVTISSPEN GETGGKVVLL PNSMEELLKI GENKMGFVPT KVLTREGAEI DDITLIRDGD FLLLSRDP

Arabidopsis Description

AKT6Potassium channel AKT6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.