Factsheet for GSMUA_Achr3P20680_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P05260_001
GSMUA_Achr2P09100_001
GSMUA_Achr3P20680_001
GSMUA_Achr4P08990_001
GSMUA_Achr4P09000_001
GSMUA_Achr4P23000_001
GSMUA_Achr4P31540_001
GSMUA_Achr5P04480_001
GSMUA_Achr5P09770_001
GSMUA_Achr5P09840_001
GSMUA_Achr5P29000_001
GSMUA_Achr6P05630_001
GSMUA_Achr6P07280_001
GSMUA_Achr6P15180_001
GSMUA_Achr6P24240_001
GSMUA_Achr6P26910_001
GSMUA_Achr7P05210_001
GSMUA_Achr7P09360_001
GSMUA_Achr7P16100_001
GSMUA_Achr7P26970_001
GSMUA_Achr8P27260_001
GSMUA_Achr9P06470_001
GSMUA_Achr9P13300_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26650.1	GSMUA_Achr11P...	AT1G07430.1	17898163
AT2G26650.1	GSMUA_Achr5P29000_001	AT1G07430.1	17898163
AT2G26650.1	GSMUA_Achr6P15180_001	AT1G07430.1	17898163
AT2G26650.1	GSMUA_AchrUn_...	AT1G07430.1	17898163
AT2G26650.1	GSMUA_Achr4P23000_001	AT1G30270.1	16814720
AT2G26650.1	GSMUA_Achr4P31540_001	AT1G30270.1	16814720
AT2G26650.1	GSMUA_Achr4P23000_001	AT1G30270.1	17898163
AT2G26650.1	GSMUA_Achr4P31540_001	AT1G30270.1	17898163
AT2G26650.1	GSMUA_Achr10P...	AT2G25090.1	17898163
AT2G26650.1	GSMUA_Achr5P04480_001	AT2G25090.1	17898163
AT2G26650.1	GSMUA_Achr7P16100_001	AT2G25090.1	17898163
AT2G26650.1	GSMUA_Achr9P13300_001	AT2G25090.1	17898163
AT2G26650.1	GSMUA_Achr3P20680_001	AT2G26650.1	12678562
AT2G26650.1	GSMUA_Achr4P08990_001	AT2G26650.1	12678562
AT2G26650.1	GSMUA_Achr4P09000_001	AT2G26650.1	12678562
AT2G26650.1	GSMUA_Achr5P09840_001	AT2G26650.1	12678562
AT2G26650.1	GSMUA_AchrUn_...	AT2G26650.1	12678562
AT2G26650.1	GSMUA_Achr3P20680_001	AT2G26650.1	15299147
AT2G26650.1	GSMUA_Achr4P08990_001	AT2G26650.1	15299147
AT2G26650.1	GSMUA_Achr4P09000_001	AT2G26650.1	15299147
AT2G26650.1	GSMUA_Achr5P09840_001	AT2G26650.1	15299147
AT2G26650.1	GSMUA_AchrUn_...	AT2G26650.1	15299147
AT2G26650.1	GSMUA_Achr3P20680_001	AT2G26650.1	9218788
AT2G26650.1	GSMUA_Achr4P08990_001	AT2G26650.1	9218788
AT2G26650.1	GSMUA_Achr4P09000_001	AT2G26650.1	9218788
AT2G26650.1	GSMUA_Achr5P09840_001	AT2G26650.1	9218788
AT2G26650.1	GSMUA_AchrUn_...	AT2G26650.1	9218788
AT2G26650.1	GSMUA_Achr6P07280_001	AT4G22200.1	12678562
AT2G26650.1	GSMUA_Achr6P24240_001	AT4G22200.1	12678562
AT2G26650.1	GSMUA_Achr6P07280_001	AT4G22200.1	15299147
AT2G26650.1	GSMUA_Achr6P24240_001	AT4G22200.1	15299147
AT2G26650.1	GSMUA_Achr10P...	AT4G30960.1	17898163
AT2G26650.1	GSMUA_Achr7P05210_001	AT4G30960.1	17898163
AT2G26650.1	GSMUA_Achr7P26970_001	AT4G30960.1	17898163
AT2G26650.1	GSMUA_AchrUn_...	AT4G30960.1	17898163
AT2G26650.1	GSMUA_Achr1P05260_001	AT4G32650.1	12678562
AT2G26650.1	GSMUA_Achr5P09770_001	AT4G32650.1	12678562
AT2G26650.1	GSMUA_Achr1P05260_001	AT4G32650.1	15299147
AT2G26650.1	GSMUA_Achr5P09770_001	AT4G32650.1	15299147
AT2G26650.1	GSMUA_Achr10P...	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr2P09100_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr6P05630_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr6P26910_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr7P09360_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr8P27260_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr9P06470_001	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	plasma membrane	74.6	75.73
GSMUA_Achr5P09840_001	Banana	plasma membrane	76.34	74.76
GSMUA_Achr4P09000_001	Banana	plasma membrane	50.81	72.99
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	73.6	72.43
VIT_11s0016g04750.t01	Wine grape	plasma membrane	70.73	65.14
PGSC0003DMT400002746	Potato	plasma membrane	69.49	63.84
Solyc12g006850.1.1	Tomato	plasma membrane	70.11	63.76
EES03354	Sorghum	plastid	69.99	63.5
AT2G26650.1	Thale cress	plasma membrane	67.37	63.13
Zm00001d044056_P003	Maize	plasma membrane, plastid	69.61	63.02
TraesCS3D01G219600.1	Wheat	plasma membrane	70.24	62.88
TraesCS3A01G233800.1	Wheat	plasma membrane	70.11	62.76
TraesCS3B01G265500.1	Wheat	plasma membrane	69.86	62.54
HORVU3Hr1G058300.1	Barley	plasma membrane	69.86	62.47
KRH03745	Soybean	plasma membrane	67.5	61.94
CDY35373	Canola	cytosol, plasma membrane, vacuole	66.13	61.74
CDY55714	Canola	cytosol, plasma membrane, vacuole	66.0	61.56
Bra032037.1-P	Field mustard	cytosol	65.88	61.51
Zm00001d011473_P003	Maize	plastid	69.36	61.01
KRH56647	Soybean	plasma membrane	67.25	60.47
VIT_04s0008g04990.t01	Wine grape	mitochondrion	67.0	59.91
Os01t0648000-01	Rice	plasma membrane	69.49	59.68
PGSC0003DMT400074787	Potato	cytosol, nucleus, plasma membrane	60.52	56.45
Solyc08g066990.2.1	Tomato	plasma membrane	60.4	56.26
Solyc05g017930.1.1	Tomato	nucleus, plasma membrane	9.96	55.94
CDX68851	Canola	plasma membrane	59.65	55.89
PGSC0003DMT400091020	Potato	peroxisome, plasma membrane	42.47	55.81
KRH61812	Soybean	plasma membrane	61.02	55.81
AT2G25600.1	Thale cress	cytosol	61.64	55.74
Bra007785.1-P	Field mustard	cytosol	59.53	55.2
CDX76746	Canola	cytosol	60.27	55.06
KRH52490	Soybean	plasma membrane	60.15	54.95
KRH05105	Soybean	cytosol, plasma membrane, vacuole	59.15	54.85
CDY11516	Canola	cytosol	59.9	54.85
CDX75249	Canola	plasma membrane	59.78	54.79
Bra011351.1-P	Field mustard	cytosol	59.65	54.68
KRH16013	Soybean	plasma membrane	59.53	54.63
AT4G32500.1	Thale cress	plasma membrane	59.28	54.09
Solyc09g005220.1.1	Tomato	cytosol	19.18	53.85
GSMUA_Achr7P09360_001	Banana	plasma membrane	40.47	50.0
GSMUA_Achr10P...	Banana	plasma membrane	40.47	49.47
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	40.35	47.58
GSMUA_Achr9P06470_001	Banana	plasma membrane	40.72	45.29
GSMUA_Achr6P26910_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	40.97	45.13
GSMUA_Achr8P27260_001	Banana	plasma membrane	40.72	45.1
GSMUA_Achr2P09100_001	Banana	plasma membrane, vacuole	40.22	43.41
GSMUA_Achr1P05260_001	Banana	plasma membrane	34.0	43.13
GSMUA_Achr5P09770_001	Banana	plasma membrane	33.87	41.65
GSMUA_Achr6P24240_001	Banana	cytosol	41.1	41.25
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	40.1	39.08
GSMUA_Achr3P16730_001	Banana	plasma membrane	29.02	32.27
GSMUA_Achr8P22950_001	Banana	cytosol	20.3	30.13
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	30.14	28.64
GSMUA_Achr8P22960_001	Banana	nucleus, peroxisome, plasma membrane	10.59	28.33

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005244	GO:GO:0005249
GO:GO:0005267	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034765
GO:GO:0055085	GO:GO:0071805	EnsemblPlantsGene:GSMUA_Achr3G20680_001	EnsemblPlants:GSMUA_Achr3P20680_001	EnsemblPlants:GSMUA_Achr3T20680_001	InterPro:IPR000595
InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom
InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M0SGD4	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834
PFAM:PF12796	PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297
PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF504	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI0002963008	InterPro:cNMP-bd-like
InterPro:cNMP-bd_dom	SEG:seg	:	:	:	:

Description

Potassium channel AKT1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G20680_001]

Coordinates

chr3:-:21808125..21813121

Molecular Weight (calculated)

90678.2 Da

IEP (calculated)

7.096

GRAVY (calculated)

-0.075

Length

803 amino acids

Sequence
(BLAST)

001: MAEKRKTGVF HIMPLAMMCG HEAERELSRD GSHYSLSSGI LPSLGARSNR RVNLPSFIVS PYDRRYRSWE TFLVTLVVYT AWVSPFEFGF LEKSRGVLAL
101: IDNIVNVFFA IDIVLTFFVA YLDRTTYLLI DSRKQIAWRY LSTWFILDVA STIPSEIARK ILPKNLRSYG FFNMLRLWRL RRVSSLFARL EKDRNFNYFW
201: VRCAKLICVT LFAVHCAGCF YYFIAARYPD PSRTWIGASI PDFHEKSLWI RYVTSMYWSI TTLTTVGYGD LHAENTREMV FDIVYMLFNL GLTAYLIGNM
301: TNLVVHGTSR TRKYRDTIQA ATGFAQRNHL PVRLQDQMIS HLSLKFRTDS EGLQQQETLD SLPKAIRSSI SHYLFYSLVS NVYLFRGVNN DLLFQLVSEM
401: KAEYFPPRED VILQNEAPTD FYVLITGTMD LIDHSSGTEQ IVQLAKSGDL VGEIGVLCYR PQLFTARTRS LCQLLRLNRT TFLSIVQSNV GEGTKIVSNL
501: LQYLKDQNGD PVMEGVSRDI EKMLTHGRLD LPLTLSFAVI REDDLLLHQL LRRGLDPNES DSNGHTVLHI AASKGNEHCV CLLLEYGADP NSTDSEGSVP
601: LWQAMVGKHE DVVNLLIKNG AALSSGDMGS FACTAAEQNN LELLKDIIRY GGDVTLPKKD KTTALHVAVC EGNVQLVEFL LEQGANIDTP DCNGWTPRKL
701: ADQQGHEEIK RLFEAKKDFA TSSVPVSTPA SHSIHSRLLT SKGNTTGKLV LMPDSLPELL DIGSKKFDFL PTRILTKDGA EVDDVKLIRD GDHLVLASDA
801: WMG

Best Arabidopsis Sequence Match ( AT2G26650.1 )
(BLAST)

001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS

Arabidopsis Description

AKT1Potassium channel AKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q38998]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.