Factsheet for GSMUA_Achr10P27890_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr2P09100_001
GSMUA_Achr3P20680_001
GSMUA_Achr4P08990_001
GSMUA_Achr4P09000_001
GSMUA_Achr5P09840_001
GSMUA_Achr5P12690_001
GSMUA_Achr6P05630_001
GSMUA_Achr6P07280_001
GSMUA_Achr6P24240_001
GSMUA_Achr6P26910_001
GSMUA_Achr7P09360_001
GSMUA_Achr8P27260_001
GSMUA_Achr9P06470_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	GSMUA_Achr3P20680_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr4P08990_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr4P09000_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr5P09840_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_AchrUn_...	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	12034902
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	12034902
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	15299147
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	15299147
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	17085433
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	17085433
AT5G46240.1	GSMUA_Achr10P...	AT5G41160.1	15299147
AT5G46240.1	GSMUA_Achr5P12690_001	AT5G41160.1	15299147
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P09360_001	Banana	plasma membrane	81.58	82.46
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	76.56	73.86
Os01t0210700-02	Rice	extracellular	56.62	61.9
CDY03233	Canola	plasma membrane	58.75	58.84
Bra017567.1-P	Field mustard	plasma membrane	58.75	58.75
CDY35154	Canola	plasma membrane	58.75	58.75
AT5G46240.1	Thale cress	plasma membrane	58.75	57.02
Os02t0245800-01	Rice	plasma membrane	61.8	56.55
CDX99479	Canola	plasma membrane	58.9	56.5
CDX78839	Canola	plasma membrane	58.6	56.29
EES06576	Sorghum	plasma membrane	62.4	56.24
GSMUA_Achr6P26910_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	62.4	56.24
Bra013296.1-P	Field mustard	plasma membrane	58.14	55.6
GSMUA_Achr9P06470_001	Banana	plasma membrane	61.03	55.54
CDY33464	Canola	cytosol, plasma membrane, plastid	56.16	55.41
CDY62359	Canola	cytosol, plasma membrane, plastid	56.01	55.26
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	55.86	55.11
Solyc02g070530.2.1	Tomato	nucleus	57.69	55.09
PGSC0003DMT400054339	Potato	plasma membrane	57.23	54.65
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	58.75	54.52
TraesCS6A01G160500.1	Wheat	plasma membrane	60.12	54.41
GSMUA_Achr2P09100_001	Banana	plasma membrane, vacuole	61.49	54.3
TraesCS6B01G190900.1	Wheat	plasma membrane	59.82	54.21
KRH44805	Soybean	plasma membrane	59.97	54.12
TraesCS6D01G152200.1	Wheat	plasma membrane	59.67	53.99
GSMUA_Achr8P27260_001	Banana	plasma membrane	59.51	53.93
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	54.64	52.56
HORVU3Hr1G028670.16	Barley	plasma membrane	56.32	52.19
TraesCS3B01G167100.1	Wheat	plasma membrane	57.08	52.16
Zm00001d016160_P001	Maize	plasma membrane	55.25	52.16
Zm00001d053446_P001	Maize	plastid	60.12	52.11
GSMUA_Achr4P09000_001	Banana	plasma membrane	44.29	52.06
TraesCS3A01G132400.1	Wheat	plasma membrane	56.93	52.02
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	54.49	51.96
TraesCS3D01G148600.1	Wheat	plasma membrane	56.77	51.88
VIT_10s0003g03270.t01	Wine grape	plasma membrane	61.64	51.2
KRH21063	Soybean	plasma membrane	60.43	51.09
KRH11194	Soybean	plasma membrane	59.97	50.71
CDX76529	Canola	plasma membrane	53.27	49.16
Zm00001d039386_P001	Maize	plasma membrane	48.4	49.07
Bra021012.1-P	Field mustard	plasma membrane	53.12	49.02
Solyc03g058900.1.1	Tomato	cytosol	13.55	45.64
CDY34066	Canola	endoplasmic reticulum, plasma membrane	40.94	44.46
GSMUA_Achr1P05260_001	Banana	plasma membrane	42.16	43.76
GSMUA_Achr5P09770_001	Banana	plasma membrane	43.38	43.64
KRH58233	Soybean	cytosol, extracellular, plasma membrane	13.7	40.54
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	49.47	40.47
GSMUA_AchrUn_...	Banana	plasma membrane	48.25	40.08
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	49.32	39.71
GSMUA_Achr5P09840_001	Banana	plasma membrane	48.25	38.66
PGSC0003DMT400054318	Potato	nucleus	17.81	37.14
GSMUA_Achr6P24240_001	Banana	cytosol	42.62	35.0
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.76	33.56
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	41.86	33.37
GSMUA_Achr8P22960_001	Banana	nucleus, peroxisome, plasma membrane	13.39	29.33
GSMUA_Achr3P16730_001	Banana	plasma membrane	26.03	23.68
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	29.38	22.84
GSMUA_Achr8P22950_001	Banana	cytosol	16.13	19.59

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005249	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	GO:GO:0071805
EnsemblPlantsGene:GSMUA_Achr10G27890_001	EnsemblPlants:GSMUA_Achr10P27890_001	EnsemblPlants:GSMUA_Achr10T27890_001	InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789
InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M0RM13	PFAM:PF00027	PFAM:PF00520
PFAM:PF11834	PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF551
InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI0002951217
InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:	:	:

Description

Potassium channel KAT1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G27890_001]

Coordinates

chr10:-:30838684..30842420

Molecular Weight (calculated)

76161.9 Da

IEP (calculated)

8.233

GRAVY (calculated)

-0.148

Length

657 amino acids

Sequence
(BLAST)

001: MVLLSAKSCF QPFCYDGFQE ESSSYSFSSD LLPSLGAKIN QSIKLRKFII SPYNPRYRAW QMFLVLLVIY SAWICPFELA FLRYLPPKLF WVENILNSFF
101: AIDIILTFFV AYLDRKSYLL IDDPKRIAAR YLSSWFIFDI LSTAPFQAIS LLFEGSGNDL GFKILNMLRL WRLRRVSSLF SRLEKDIRFN YFWTRCTKLI
201: LVTLFAVHSA ACFNYLIADR YPNPRRTWIG AVISNFRSEN LWTRYVTAMY WSITTLTTTG YGDLHAENSR EMLFDIFYML FNLGLTAYLI GNMTNLVVHG
301: TSRTRNFRDT IQAALEFAAR NQLPQRIKDQ MLSHICLRFK TEGLKQQETL NDLPKGISSS IAYCLFFPIL QQVQLFHGVS FNFLYQLVTE MQAEYFPPKE
401: DVILQNEAST DLYILVSGAV DLISNIGGTE QVYERVAAGE VFGEIGVLCC MPQPFTARTI ELSQILRLSS TTFMNMFQEN TEDGNTIRNN LLQKMKLEQR
501: PSTRVDENGP RVHDEWLKKE NQSLSSQHQD YKVQEQPTRR SMETGDIPCT PQESVLANIH RTNTTTEIKQ ERFQQLMHDT QTTNKRVIIH MLSRKSRSSR
601: EQIRKLINLP GSLEELFKTA SQKFTGYQPT KVVNQDNAEI DDIAVVRDGD HLFLLEL

Best Arabidopsis Sequence Match ( AT5G46240.1 )
(BLAST)

001: MSISWTRNFF ERFCVEEYNI DTIKQSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPRYR AWEMWLVLLV IYSAWICPFQ FAFITYKKDA IFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN

Arabidopsis Description

KAT1At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.