Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400054339 | Potato | plasma membrane | 96.51 | 96.51 |
| Solyc08g016500.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 64.1 | 64.57 |
| Solyc03g058900.1.1 | Tomato | cytosol | 18.02 | 63.59 |
| CDY03233 | Canola | plasma membrane | 59.45 | 62.35 |
| Bra017567.1-P | Field mustard | plasma membrane | 59.3 | 62.1 |
| CDY35154 | Canola | plasma membrane | 59.3 | 62.1 |
| CDX78839 | Canola | plasma membrane | 61.19 | 61.55 |
| Bra013296.1-P | Field mustard | plasma membrane | 61.19 | 61.28 |
| CDX99479 | Canola | plasma membrane | 60.9 | 61.17 |
| AT5G46240.1 | Thale cress | plasma membrane | 59.3 | 60.27 |
| AT4G18290.2 | Thale cress | mitochondrion, plasma membrane | 61.63 | 59.89 |
| CDY33464 | Canola | cytosol, plasma membrane, plastid | 57.41 | 59.31 |
| Bra025028.1-P | Field mustard | cytosol, endoplasmic reticulum, plasma membrane | 57.12 | 59.01 |
| CDY62359 | Canola | cytosol, plasma membrane, plastid | 56.98 | 58.86 |
| KRH44805 | Soybean | plasma membrane | 62.21 | 58.79 |
| TraesCS3D01G294000.1 | Wheat | mitochondrion, plasma membrane | 42.73 | 58.57 |
| Os01t0756700-01 | Rice | plasma membrane | 42.73 | 58.57 |
| TraesCS3B01G328800.1 | Wheat | plasma membrane | 42.73 | 58.22 |
| TraesCS3A01G294200.1 | Wheat | mitochondrion, plasma membrane | 42.3 | 58.2 |
| GSMUA_Achr10P... | Banana | plasma membrane | 55.09 | 57.69 |
| EES01496 | Sorghum | mitochondrion, plasma membrane | 44.04 | 57.17 |
| GSMUA_Achr7P09360_001 | Banana | plasma membrane | 53.2 | 56.31 |
| Os01t0210700-02 | Rice | extracellular | 48.84 | 55.91 |
| VIT_10s0003g03270.t01 | Wine grape | plasma membrane | 63.95 | 55.63 |
| HORVU3Hr1G072850.15 | Barley | plastid | 41.13 | 55.27 |
| KRH11194 | Soybean | plasma membrane | 62.06 | 54.95 |
| KRH21063 | Soybean | plasma membrane | 61.63 | 54.57 |
| GSMUA_Achr6P05630_001 | Banana | cytosol, nucleus, plasma membrane | 52.91 | 53.45 |
| CDX76529 | Canola | plasma membrane | 54.94 | 53.09 |
| Bra021012.1-P | Field mustard | plasma membrane | 54.8 | 52.95 |
| GSMUA_Achr9P06470_001 | Banana | plasma membrane | 54.07 | 51.52 |
| GSMUA_Achr6P26910_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 54.51 | 51.44 |
| GSMUA_Achr8P27260_001 | Banana | plasma membrane | 52.91 | 50.21 |
| GSMUA_Achr2P09100_001 | Banana | plasma membrane, vacuole | 54.22 | 50.13 |
| CDY34066 | Canola | endoplasmic reticulum, plasma membrane | 43.9 | 49.92 |
| Os02t0245800-01 | Rice | plasma membrane | 52.03 | 49.86 |
| EES06576 | Sorghum | plasma membrane | 52.18 | 49.25 |
| HORVU3Hr1G028670.16 | Barley | plasma membrane | 50.0 | 48.52 |
| TraesCS6A01G160500.1 | Wheat | plasma membrane | 51.16 | 48.48 |
| TraesCS6D01G152200.1 | Wheat | plasma membrane | 50.73 | 48.07 |
| TraesCS3D01G148600.1 | Wheat | plasma membrane | 50.0 | 47.84 |
| TraesCS6B01G190900.1 | Wheat | plasma membrane | 50.29 | 47.72 |
| TraesCS3B01G167100.1 | Wheat | plasma membrane | 49.85 | 47.71 |
| TraesCS3A01G132400.1 | Wheat | plasma membrane | 49.85 | 47.71 |
| Zm00001d016160_P001 | Maize | plasma membrane | 47.24 | 46.7 |
| Zm00001d053446_P001 | Maize | plastid | 51.31 | 46.57 |
| Solyc05g017930.1.1 | Tomato | nucleus, plasma membrane | 9.59 | 46.15 |
| Zm00001d039386_P001 | Maize | plasma membrane | 42.01 | 44.6 |
| Solyc01g010080.2.1 | Tomato | plastid | 40.26 | 44.11 |
| Solyc08g068000.1.1 | Tomato | plasma membrane | 39.39 | 42.15 |
| KRH58233 | Soybean | cytosol, extracellular, plasma membrane | 13.37 | 41.44 |
| Solyc09g005220.1.1 | Tomato | cytosol | 17.15 | 41.26 |
| Solyc12g006850.1.1 | Tomato | plasma membrane | 49.71 | 38.73 |
| Solyc01g104030.2.1 | Tomato | cytosol | 43.46 | 35.72 |
| Solyc08g066990.2.1 | Tomato | plasma membrane | 44.33 | 35.38 |
| Solyc10g024360.1.1 | Tomato | cytosol | 41.13 | 33.65 |
| Zm00001d012717_P002 | Maize | plasma membrane | 45.78 | 30.55 |
| Solyc03g097940.2.1 | Tomato | plasma membrane | 26.6 | 23.55 |
| Solyc05g051220.2.1 | Tomato | cytosol | 27.47 | 22.94 |
| Solyc11g011500.1.1 | Tomato | cytosol | 27.33 | 22.68 |
Protein Annotations
| Gene3D:1.10.287.630 | Gene3D:1.10.287.70 | Gene3D:2.60.120.10 | MapMan:24.3.2.2 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005249 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006813 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0042391 | GO:GO:0055085 | GO:GO:0071805 |
| InterPro:IPR000595 | InterPro:IPR014710 | InterPro:IPR021789 | InterPro:Ion_trans_dom | UniProt:K4B834 | InterPro:KHA_dom |
| InterPro:K_chnl_volt-dep_EAG/ELK/ERG | PFAM:PF00027 | PFAM:PF00520 | PFAM:PF11834 | PRINTS:PR01463 | PFscan:PS50042 |
| PFscan:PS51490 | PANTHER:PTHR10217 | PANTHER:PTHR10217:SF551 | InterPro:RmlC-like_jellyroll | SMART:SM00100 | SUPFAM:SSF51206 |
| SUPFAM:SSF81324 | EnsemblPlantsGene:Solyc02g070530.2 | EnsemblPlants:Solyc02g070530.2.1 | TMHMM:TMhelix | UniParc:UPI0002768854 | InterPro:cNMP-bd-like |
| InterPro:cNMP-bd_dom | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:40261306..40264437
Molecular Weight (calculated)
78957.4 Da
IEP (calculated)
7.015
GRAVY (calculated)
-0.106
Length
688 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFSYAKNCL QRFCVEEFQM DTETTHSGFF SSDLLPSLGA RINYATKLRR FIISPYNPRY RCWEMFLVVM VIYTAWISLF EVAFLSYKKD DTLFIVDNIV
101: DCFFAIDILL TFFVAYLHPE SYLLVDEPKK IAIRYLSTWF IFDVCSTVPF QSLILVFTDH KESGGVGFRL LSMLRLWRLR RVSALFARLE KDIRFNYFWT
201: RCTKLVSVTL FAVHCAGCIN YMIADRYPDP KKTWIGAVYP DFKQLSVGDR YITSLYWSIV TLTTTGYGDL HAENSREMLF DIFYMLFNLG LTSYLIGNMT
301: NLVVHWTSRT RNFRETVKAA QEFAKRNQLP PRVQDQVLSH MCLKFKTETL KQEETLNGLP KAIRTSIAHH LFFPIVQNVH LFQGVSRNLL FQLVPEMEAE
401: YFPPKQDVIL QNEAPTDLYI IVSGAVEFIA QIEGLEQTIG KAVAGEIFGE IGVLCGRPQP FAVRTTEISQ ILRLNRTSLM NILRANPEDE RIIMNNLLMK
501: LQGFGGFGYV DHQSNAGPEI KRHDDITLTS IDINNLEARV KKQEKDDGQE VNKTMNDLSI NLENKSELSE HNVELIGPDE GTKSCQLKPE VPFCSNSCLK
601: RPTCSTSSSG SQGTKSTHHK KRITIHMKKE PLHHQFGKLI ILPDSLQELF RVAGQRFGGC DFQRAVNAED AEIDDIDVVR DGDHLFFL
101: DCFFAIDILL TFFVAYLHPE SYLLVDEPKK IAIRYLSTWF IFDVCSTVPF QSLILVFTDH KESGGVGFRL LSMLRLWRLR RVSALFARLE KDIRFNYFWT
201: RCTKLVSVTL FAVHCAGCIN YMIADRYPDP KKTWIGAVYP DFKQLSVGDR YITSLYWSIV TLTTTGYGDL HAENSREMLF DIFYMLFNLG LTSYLIGNMT
301: NLVVHWTSRT RNFRETVKAA QEFAKRNQLP PRVQDQVLSH MCLKFKTETL KQEETLNGLP KAIRTSIAHH LFFPIVQNVH LFQGVSRNLL FQLVPEMEAE
401: YFPPKQDVIL QNEAPTDLYI IVSGAVEFIA QIEGLEQTIG KAVAGEIFGE IGVLCGRPQP FAVRTTEISQ ILRLNRTSLM NILRANPEDE RIIMNNLLMK
501: LQGFGGFGYV DHQSNAGPEI KRHDDITLTS IDINNLEARV KKQEKDDGQE VNKTMNDLSI NLENKSELSE HNVELIGPDE GTKSCQLKPE VPFCSNSCLK
601: RPTCSTSSSG SQGTKSTHHK KRITIHMKKE PLHHQFGKLI ILPDSLQELF RVAGQRFGGC DFQRAVNAED AEIDDIDVVR DGDHLFFL
001: MSISWTRNFF ERFCVEEYNI DTIKQSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPRYR AWEMWLVLLV IYSAWICPFQ FAFITYKKDA IFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN
Arabidopsis Description
KAT1At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.