Factsheet for GSMUA_Achr6P26910_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr2P09100_001
GSMUA_Achr3P20680_001
GSMUA_Achr4P08990_001
GSMUA_Achr4P09000_001
GSMUA_Achr5P09840_001
GSMUA_Achr5P12690_001
GSMUA_Achr6P05630_001
GSMUA_Achr6P07280_001
GSMUA_Achr6P24240_001
GSMUA_Achr6P26910_001
GSMUA_Achr7P09360_001
GSMUA_Achr8P27260_001
GSMUA_Achr9P06470_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	GSMUA_Achr3P20680_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr4P08990_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr4P09000_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr5P09840_001	AT2G26650.1	15299147
AT5G46240.1	GSMUA_AchrUn_...	AT2G26650.1	15299147
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	12034902
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	12034902
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	15299147
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	15299147
AT5G46240.1	GSMUA_Achr6P07280_001	AT4G22200.1	17085433
AT5G46240.1	GSMUA_Achr6P24240_001	AT4G22200.1	17085433
AT5G46240.1	GSMUA_Achr10P...	AT5G41160.1	15299147
AT5G46240.1	GSMUA_Achr5P12690_001	AT5G41160.1	15299147
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	11042178
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	15299147
AT5G46240.1	GSMUA_Achr10P...	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr2P09100_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr6P05630_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr6P26910_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr7P09360_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr8P27260_001	AT5G46240.1	17085433
AT5G46240.1	GSMUA_Achr9P06470_001	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P06470_001	Banana	plasma membrane	77.64	78.39
GSMUA_Achr8P27260_001	Banana	plasma membrane	72.29	72.69
GSMUA_Achr2P09100_001	Banana	plasma membrane, vacuole	73.11	71.64
GSMUA_Achr7P09360_001	Banana	plasma membrane	55.69	62.46
GSMUA_Achr10P...	Banana	plasma membrane	56.24	62.4
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	55.01	58.88
CDY03233	Canola	plasma membrane	52.26	58.08
CDY35154	Canola	plasma membrane	52.13	57.84
Bra017567.1-P	Field mustard	plasma membrane	52.13	57.84
CDX99479	Canola	plasma membrane	53.64	57.08
CDX78839	Canola	plasma membrane	53.22	56.73
CDY33464	Canola	cytosol, plasma membrane, plastid	51.44	56.31
Bra013296.1-P	Field mustard	plasma membrane	52.81	56.04
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	51.17	56.01
CDY62359	Canola	cytosol, plasma membrane, plastid	51.17	56.01
AT5G46240.1	Thale cress	plasma membrane	51.99	55.98
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	53.77	55.37
Solyc02g070530.2.1	Tomato	nucleus	51.44	54.51
KRH44805	Soybean	plasma membrane	54.05	54.12
PGSC0003DMT400054339	Potato	plasma membrane	50.48	53.49
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	49.52	52.86
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	49.25	52.1
KRH21063	Soybean	plasma membrane	55.42	51.99
KRH11194	Soybean	plasma membrane	54.73	51.35
VIT_10s0003g03270.t01	Wine grape	plasma membrane	55.14	50.82
GSMUA_Achr4P09000_001	Banana	plasma membrane	38.55	50.27
CDX76529	Canola	plasma membrane	48.7	49.86
Bra021012.1-P	Field mustard	plasma membrane	48.56	49.72
CDY34066	Canola	endoplasmic reticulum, plasma membrane	37.86	45.62
GSMUA_Achr1P05260_001	Banana	plasma membrane	37.45	43.13
Solyc03g058900.1.1	Tomato	cytosol	11.39	42.56
GSMUA_Achr5P09770_001	Banana	plasma membrane	37.45	41.81
KRH58233	Soybean	cytosol, extracellular, plasma membrane	12.48	40.99
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	45.13	40.97
GSMUA_AchrUn_...	Banana	plasma membrane	43.9	40.46
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	44.72	39.95
GSMUA_Achr5P09840_001	Banana	plasma membrane	44.86	39.88
PGSC0003DMT400054318	Potato	nucleus	15.78	36.51
GSMUA_Achr6P24240_001	Banana	cytosol	38.96	35.5
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	38.96	34.47
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.31	33.56
GSMUA_Achr8P22960_001	Banana	nucleus, peroxisome, plasma membrane	11.11	27.0
GSMUA_Achr3P16730_001	Banana	plasma membrane	23.59	23.82
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	26.2	22.6
GSMUA_Achr8P22950_001	Banana	cytosol	16.46	22.18

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005249	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	GO:GO:0071805
EnsemblPlantsGene:GSMUA_Achr6G26910_001	EnsemblPlants:GSMUA_Achr6P26910_001	EnsemblPlants:GSMUA_Achr6T26910_001	InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789
InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M0TAI6	PFAM:PF00027	PFAM:PF00520
PFAM:PF11834	PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF551
InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI000294AAF0
InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	:	:	:	:

Description

Potassium channel KAT1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G26910_001]

Coordinates

chr6:-:27532177..27535875

Molecular Weight (calculated)

84106.2 Da

IEP (calculated)

7.199

GRAVY (calculated)

-0.175

Length

729 amino acids

Sequence
(BLAST)

001: MLFSCTNYFQ HFCSDGFQLG NGAYSPHSDL LPSLGATINN TIKLRKHIVS PYDPRYRLWE MFLILLVLYS AWICPFEFAF LRYLPSTIFL VDNIVNSFFA
101: IDIVLTFFVA FIDHKSYLLV DDPKRIAIRY LSTWFMFDVC STFPFQTISF FFNRHGNSLG FKLLSMLRLW RLHRVSSLFA RLEKDIRLNY FWTRCTKLFS
201: VTLFTVHCSG CFNYMIADRY PDPGRTWIGA VIPNFREDSL WSRYVTSIYW SITTLTTTGY GDLHAENTRE MLFDIFYMFF NLGLTAYLIG NMTNLVVHGT
301: SRTKSFRDTI HAASEFASRN KLPKHIGEQM LSHICLRFKT EELKQQETLD GLPKAIRSSI AECLFFPIVR RVYLFQEVSY NLIFQLVTEM QAEYFPPKED
401: VILQNEAPTD LYIVVSGTVE MRTHVDGVDK VHERVTAGEV FGEIGVLCHI PQPFTIRTIE LAQILRLSRS VFFSTIRESK QDATIVMRNL FQKLRLHARL
501: YPGVQQNDPG ALLKEWFDIG PTNMNGNHAQ DGVHYQVQNL HALEQMDGGN LLSEAENNKD ISIVDELPIG QANPKLDHAD QQTGFPTWGG HNKTNNIPLK
601: QAEAVDKADS IRWRQKDKHE KYDNEGAFEL LSSIGHRKSF LGEHELESNN IMKLSSKRVT IQMYSQKENP ARQPTAKMIK LPGTMEELLR IGGEKFVGHH
701: PTKVINQEKA EIDDISVVRD GDHLYFLEI

Best Arabidopsis Sequence Match ( AT4G18290.1 )
(BLAST)

001: MSISCTRNFF KRFCVEEYNM DTFKHSSFLS ADLLPSLGAR INQSTKLRKH IISPFDPRFR GWEMWLVILV IYSAWICPFE FAFITYKKDA LFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDKPKKIA IRYLSTWFAF DVCSTAPFQS LSLLFKYNGS EIGFRVLSML RLWRLRRVSS LFARLEKDIR FNYFWTRCTK
201: LISVTLFAVH CAGCFAYLIA DQYHDPTKTW IGAVYPNFKE TSVWSRYVTA LYWSITTLTT TGYGDLHAEN PREMLFFVFF MLFNLGFTSY LIGNMTNLVV
301: HWTSRTRNFR DTVRAASEFA SRNQLPPNIQ DQMLSHICLK FKTEGLKQQE ALNGLPKAIR SSIANYLFFP IVQNVYLFHG VSRNFLFQLV SDIDAEYFPP
401: REDVILQNEA PTDLYILVSG AVDFTVYVGE EDQVQGKAVV GDAFGEIGVL CYTPQPFTVR TTELSQILRI SKKSLMSAMR AHVEDGRVIM NNLFMKLRGQ
501: QSIAIDDPNS EPESLLKEWL VGGSKTGEGN ASDQGHGHKY LQLHDSENID MGSTEWRDSR RSGYGETKRV REHTIEIEEG EKPNKEFDGK GCSDADLTSF
601: EFHSQEAYPY CRSNIQIKQH EAAKPKDKRV TIHLKSRDKD LSKLIILPAS IEELLRLAGE KFGYSFTKVT NAENAEIDDE DVIRDGDHLY ILINENS

Arabidopsis Description

KAT2potassium channel in Arabidopsis thaliana 2 [Source:TAIR;Acc:AT4G18290]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.