Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- vacuole 2
- plasma membrane 3
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g016500.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 95.21 | 96.05 |
| PGSC0003DMT400024866 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 34.69 | 82.7 |
| PGSC0003DMT400054339 | Potato | plasma membrane | 64.3 | 64.39 |
| Os01t0756700-01 | Rice | plasma membrane | 42.67 | 58.57 |
| Bra017567.1-P | Field mustard | plasma membrane | 55.3 | 57.99 |
| CDY35154 | Canola | plasma membrane | 55.3 | 57.99 |
| CDY03233 | Canola | plasma membrane | 55.15 | 57.93 |
| PGSC0003DMT400054318 | Potato | nucleus | 26.42 | 57.78 |
| TraesCS3A01G294200.1 | Wheat | mitochondrion, plasma membrane | 41.51 | 57.2 |
| TraesCS3D01G294000.1 | Wheat | mitochondrion, plasma membrane | 41.36 | 56.77 |
| TraesCS3B01G328800.1 | Wheat | plasma membrane | 41.51 | 56.63 |
| AT5G46240.1 | Thale cress | plasma membrane | 55.15 | 56.13 |
| CDY33464 | Canola | cytosol, plasma membrane, plastid | 53.99 | 55.86 |
| CDY62359 | Canola | cytosol, plasma membrane, plastid | 53.99 | 55.86 |
| Bra025028.1-P | Field mustard | cytosol, endoplasmic reticulum, plasma membrane | 53.85 | 55.71 |
| CDX78839 | Canola | plasma membrane | 55.3 | 55.7 |
| CDX99479 | Canola | plasma membrane | 55.3 | 55.62 |
| KRH44805 | Soybean | plasma membrane | 58.49 | 55.36 |
| Bra013296.1-P | Field mustard | plasma membrane | 55.01 | 55.17 |
| Os01t0210700-02 | Rice | extracellular | 47.75 | 54.74 |
| EES01496 | Sorghum | mitochondrion, plasma membrane | 41.94 | 54.53 |
| GSMUA_Achr10P... | Banana | plasma membrane | 51.96 | 54.49 |
| AT4G18290.2 | Thale cress | mitochondrion, plasma membrane | 55.88 | 54.38 |
| HORVU3Hr1G072850.15 | Barley | plastid | 40.06 | 53.91 |
| GSMUA_Achr7P09360_001 | Banana | plasma membrane | 50.51 | 53.54 |
| VIT_10s0003g03270.t01 | Wine grape | plasma membrane | 60.96 | 53.1 |
| GSMUA_Achr6P05630_001 | Banana | cytosol, nucleus, plasma membrane | 51.38 | 51.98 |
| KRH21063 | Soybean | plasma membrane | 58.49 | 51.87 |
| KRH11194 | Soybean | plasma membrane | 57.33 | 50.84 |
| CDX76529 | Canola | plasma membrane | 51.96 | 50.28 |
| Bra021012.1-P | Field mustard | plasma membrane | 51.81 | 50.14 |
| GSMUA_Achr9P06470_001 | Banana | plasma membrane | 52.1 | 49.72 |
| GSMUA_Achr6P26910_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 52.1 | 49.25 |
| GSMUA_Achr8P27260_001 | Banana | plasma membrane | 50.51 | 48.0 |
| HORVU3Hr1G028670.16 | Barley | plasma membrane | 49.06 | 47.67 |
| TraesCS3D01G148600.1 | Wheat | plasma membrane | 49.49 | 47.43 |
| Os02t0245800-01 | Rice | plasma membrane | 49.2 | 47.21 |
| TraesCS3A01G132400.1 | Wheat | plasma membrane | 49.06 | 47.01 |
| TraesCS3B01G167100.1 | Wheat | plasma membrane | 48.91 | 46.87 |
| GSMUA_Achr2P09100_001 | Banana | plasma membrane, vacuole | 50.51 | 46.77 |
| EES06576 | Sorghum | plasma membrane | 49.2 | 46.5 |
| TraesCS6A01G160500.1 | Wheat | plasma membrane | 48.33 | 45.87 |
| TraesCS6D01G152200.1 | Wheat | plasma membrane | 48.04 | 45.59 |
| TraesCS6B01G190900.1 | Wheat | plasma membrane | 47.75 | 45.38 |
| CDY34066 | Canola | endoplasmic reticulum, plasma membrane | 39.62 | 45.12 |
| Zm00001d039386_P001 | Maize | plasma membrane | 41.51 | 44.14 |
| PGSC0003DMT400091020 | Potato | peroxisome, plasma membrane | 39.04 | 44.03 |
| Zm00001d016160_P001 | Maize | plasma membrane | 44.27 | 43.82 |
| Zm00001d053446_P001 | Maize | plastid | 47.9 | 43.54 |
| PGSC0003DMT400037608 | Potato | plastid | 38.75 | 42.86 |
| PGSC0003DMT400065964 | Potato | cytosol, plastid | 38.9 | 42.47 |
| KRH58233 | Soybean | cytosol, extracellular, plasma membrane | 13.5 | 41.89 |
| PGSC0003DMT400002746 | Potato | plasma membrane | 48.48 | 38.22 |
| PGSC0003DMT400074787 | Potato | cytosol, nucleus, plasma membrane | 43.25 | 34.61 |
| PGSC0003DMT400061090 | Potato | cytosol | 41.07 | 34.34 |
| PGSC0003DMT400062100 | Potato | plasma membrane | 40.35 | 33.02 |
| Zm00001d012717_P002 | Maize | plasma membrane | 44.56 | 29.78 |
| PGSC0003DMT400034446 | Potato | cytosol | 27.0 | 22.46 |
Protein Annotations
| Gene3D:1.10.287.70 | EntrezGene:102602870 | Gene3D:2.60.120.10 | MapMan:24.3.2.2 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005216 | GO:GO:0005249 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006813 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 |
| GO:GO:0071805 | InterPro:IPR000595 | InterPro:IPR014710 | InterPro:IPR021789 | InterPro:Ion_trans_dom | InterPro:KHA_dom |
| InterPro:K_chnl_volt-dep_EAG/ELK/ERG | UniProt:M1AKV1 | PFAM:PF00027 | PFAM:PF00520 | PFAM:PF11834 | EnsemblPlantsGene:PGSC0003DMG400009648 |
| PGSC:PGSC0003DMG400009648 | EnsemblPlants:PGSC0003DMT400024968 | PRINTS:PR01463 | PFscan:PS50042 | PFscan:PS51490 | PANTHER:PTHR10217 |
| PANTHER:PTHR10217:SF551 | InterPro:RmlC-like_jellyroll | SMART:SM00100 | SUPFAM:SSF51206 | SUPFAM:SSF81324 | TMHMM:TMhelix |
| UniParc:UPI000295616C | RefSeq:XP_006356880.1 | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | SEG:seg | : |
Description
K+ channel inward rectifying [Source:PGSC_GENE;Acc:PGSC0003DMG400009648]
Coordinates
chr8:+:10201719..10205237
Molecular Weight (calculated)
79532.5 Da
IEP (calculated)
6.338
GRAVY (calculated)
-0.153
Length
689 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFSYAKYSG FFSSDLLPSL GTKINHETKL RKYIISPLDL RYRAWEMFLL FLVIYTAWIT PFEFAFLICK IDALVIFDNI VNCFFAIDIF LNFFMAYLDK
101: ESYILVDDPK KIAIRYLSTW FIFDVCSTVP FHDFLFIDHK ESGVGFKLLS MLRLWRLRRV SALFARLEKD IRFNYFWTRY AKLISVTLFA VHCAGCFNYV
201: IADRYPDTKR TWIGAANPNF KQDSLWDRYI TSLYWSIVTL TTTGYGDLHA ENTREMLFDI FYMLFNLGLT SYIISNMTNL VVHWTGYTRN FRDNVEAAQE
301: FAKRNQLSPR IQDQVLSHIC LKFKTESLQQ KETINVLPKA IRSSIAHYLF LPIVQNVSLF QGVSRDLLFQ LVPEMEAEYY PPKEDVILQN ESQTDFYIIV
401: SGALDLLVDI DGREQIIGKA VAGESFGEIG VLLGRPQPYA VRTTEISQIL CLSRKTFLNI LRDNQEDERI IMRNLIQKLQ GFGGFDNVDE ESDPSLVFNN
501: FSHVSKQDTP TNLSDLISIN IQTLEARTKK QVENEGESCG RKRQTVLDHS VVPKGCIEMT QSPPERRWKE DQLDTERGGN KSIHEVPCCS YSGNRSQTGA
601: KGGKSIKKRV TIHMRNNINS LQEQNGKLII LPDTLEELFR MAGQRFGEYN LKKVVNAEDV EIDETDVIRD GDHLFFLSTD CSCVETSTM
101: ESYILVDDPK KIAIRYLSTW FIFDVCSTVP FHDFLFIDHK ESGVGFKLLS MLRLWRLRRV SALFARLEKD IRFNYFWTRY AKLISVTLFA VHCAGCFNYV
201: IADRYPDTKR TWIGAANPNF KQDSLWDRYI TSLYWSIVTL TTTGYGDLHA ENTREMLFDI FYMLFNLGLT SYIISNMTNL VVHWTGYTRN FRDNVEAAQE
301: FAKRNQLSPR IQDQVLSHIC LKFKTESLQQ KETINVLPKA IRSSIAHYLF LPIVQNVSLF QGVSRDLLFQ LVPEMEAEYY PPKEDVILQN ESQTDFYIIV
401: SGALDLLVDI DGREQIIGKA VAGESFGEIG VLLGRPQPYA VRTTEISQIL CLSRKTFLNI LRDNQEDERI IMRNLIQKLQ GFGGFDNVDE ESDPSLVFNN
501: FSHVSKQDTP TNLSDLISIN IQTLEARTKK QVENEGESCG RKRQTVLDHS VVPKGCIEMT QSPPERRWKE DQLDTERGGN KSIHEVPCCS YSGNRSQTGA
601: KGGKSIKKRV TIHMRNNINS LQEQNGKLII LPDTLEELFR MAGQRFGEYN LKKVVNAEDV EIDETDVIRD GDHLFFLSTD CSCVETSTM
001: MSISWTRNFF ERFCVEEYNI DTIKQSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPRYR AWEMWLVLLV IYSAWICPFQ FAFITYKKDA IFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN
Arabidopsis Description
KAT1At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.