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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013296.1-P Field mustard plasma membrane 98.68 98.25
CDX99479 Canola plasma membrane 96.64 96.5
AT4G18290.2 Thale cress mitochondrion, plasma membrane 86.55 83.62
CDY35154 Canola plasma membrane 72.51 75.49
CDY03233 Canola plasma membrane 72.08 75.15
CDX76529 Canola plasma membrane 77.34 74.3
CDY33464 Canola cytosol, plasma membrane, plastid 71.34 73.27
CDY62359 Canola cytosol, plasma membrane, plastid 70.91 72.82
CDY34066 Canola endoplasmic reticulum, plasma membrane 63.3 71.57
Os01t0756700-01 Rice plasma membrane 46.34 63.15
Solyc02g070530.2.1 Tomato nucleus 61.55 61.19
EES01496 Sorghum mitochondrion, plasma membrane 47.37 61.13
PGSC0003DMT400054339 Potato plasma membrane 60.96 60.61
TraesCS3A01G294200.1 Wheat mitochondrion, plasma membrane 44.3 60.6
TraesCS3B01G328800.1 Wheat plasma membrane 44.74 60.59
TraesCS3D01G294000.1 Wheat mitochondrion, plasma membrane 44.44 60.56
KRH44805 Soybean plasma membrane 63.89 60.03
GSMUA_Achr10P... Banana plasma membrane 56.29 58.6
GSMUA_Achr7P09360_001 Banana plasma membrane 55.12 58.0
HORVU3Hr1G072850.15 Barley plastid 43.13 57.62
VIT_10s0003g03270.t01 Wine grape plasma membrane 66.08 57.14
KRH21063 Soybean plasma membrane 64.77 57.01
KRH11194 Soybean plasma membrane 64.04 56.37
Os01t0210700-02 Rice extracellular 48.98 55.74
Solyc08g016500.2.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.56 55.64
PGSC0003DMT400024968 Potato cytosol, plasma membrane, vacuole 55.7 55.3
GSMUA_Achr6P05630_001 Banana cytosol, nucleus, plasma membrane 54.39 54.63
GSMUA_Achr6P26910_001 Banana endoplasmic reticulum, peroxisome, plasma membrane 56.73 53.22
GSMUA_Achr9P06470_001 Banana plasma membrane 55.99 53.05
GSMUA_Achr2P09100_001 Banana plasma membrane, vacuole 55.99 51.48
GSMUA_Achr8P27260_001 Banana plasma membrane 53.95 50.9
Os02t0245800-01 Rice plasma membrane 53.07 50.56
EES06576 Sorghum plasma membrane 53.66 50.34
TraesCS6A01G160500.1 Wheat plasma membrane 52.78 49.72
TraesCS6D01G152200.1 Wheat plasma membrane 52.63 49.59
TraesCS6B01G190900.1 Wheat plasma membrane 52.49 49.52
HORVU3Hr1G028670.16 Barley plasma membrane 50.44 48.66
TraesCS3B01G167100.1 Wheat plasma membrane 50.88 48.4
TraesCS3A01G132400.1 Wheat plasma membrane 50.73 48.26
TraesCS3D01G148600.1 Wheat plasma membrane 50.73 48.26
Zm00001d053446_P001 Maize plastid 53.07 47.89
Zm00001d016160_P001 Maize plasma membrane 48.1 47.27
Zm00001d039386_P001 Maize plasma membrane 42.84 45.22
Solyc03g058900.1.1 Tomato cytosol 12.87 45.13
KRH58233 Soybean cytosol, extracellular, plasma membrane 14.18 43.69
CDY13496 Canola plastid 38.45 40.09
PGSC0003DMT400054318 Potato nucleus 18.42 40.0
CDX68872 Canola plastid 37.87 39.78
CDX75267 Canola plastid 37.57 39.48
CDY35373 Canola cytosol, plasma membrane, vacuole 48.25 38.37
CDY55714 Canola cytosol, plasma membrane, vacuole 48.1 38.21
CDX72366 Canola plastid 35.82 37.98
CDY11516 Canola cytosol 47.22 36.83
CDX79135 Canola plasma membrane 42.25 36.68
CDX76746 Canola cytosol 47.08 36.63
CDX68851 Canola plasma membrane 45.61 36.41
PGSC0003DMT400024866 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 15.06 35.64
CDX75249 Canola plasma membrane 45.47 35.5
CDX82921 Canola cytosol 41.81 33.18
Zm00001d012717_P002 Maize plasma membrane 48.98 32.49
CDY28715 Canola cytosol 30.26 24.94
CDY51528 Canola cytosol 30.12 24.85
CDX92017 Canola plasma membrane 29.53 24.37
CDX74231 Canola plasma membrane 29.39 24.25
CDX71184 Canola plasma membrane 25.88 24.11
CDY32059 Canola plasma membrane 28.22 23.59
CDY61287 Canola plasma membrane 15.64 20.19
CDY10020 Canola cytosol 5.99 12.02
Protein Annotations
Gene3D:1.10.287.630Gene3D:1.10.287.70Gene3D:2.60.120.10MapMan:24.3.2.2GO:A0A078CS00EnsemblPlants:CDX78839
ProteinID:CDX78839ProteinID:CDX78839.1GO:GO:0003674GO:GO:0005215GO:GO:0005216GO:GO:0005249
GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0006813GO:GO:0008150GO:GO:0016020
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00131313001InterPro:IPR000595InterPro:IPR014710InterPro:IPR021789InterPro:Ion_trans_dom
InterPro:KHA_domInterPro:K_chnl_volt-dep_EAG/ELK/ERGPFAM:PF00027PFAM:PF00520PFAM:PF11834PRINTS:PR01463
PFscan:PS50042PFscan:PS51490PANTHER:PTHR10217PANTHER:PTHR10217:SF551InterPro:RmlC-like_jellyrollSMART:SM00100
SUPFAM:SSF51206SUPFAM:SSF81324TMHMM:TMhelixUniParc:UPI0004EE7CA5InterPro:cNMP-bd-likeInterPro:cNMP-bd_dom
SEG:seg:::::
Description
BnaA01g09060D
Coordinates
chrLK031816:+:373523..376519
Molecular Weight (calculated)
78449.0 Da
IEP (calculated)
7.162
GRAVY (calculated)
-0.156
Length
684 amino acids
Sequence
(BLAST)
001: MSISCTRNFF ERFCVEEYNM DARKHSSFLS ADLLPSLGAR INQSTKLRKH IISPFDPRFR AWEMWLVILV IYSAWICPFE FAFITYKKDA LFIVDNIVNG
101: FFAIDIVLTF FVAYLDSHSY LLVDNPKKIA IRYLSTWFAF DVCSTAPFQS LSLLFNYNGS EIGFRVLSML RLWRLRRVSS LFARLEKDIR FNYFWTRCTK
201: LISVTLFAVH CAGCFNYLIA EQYPDPRKTW IGAVYPNFKE ASLWSRYVTA LYWSITTLTT TGYGDLHAEN PREMLFDVFY MLFNLGFTSY LIGNMTNLVV
301: HWTSRTRTFR DTVRAASEFA SRNQLPPNIQ DQMLSHICLK FKTEGLKQQE TLNGLPKAIR SSIANYLFLH ILQKVYLFEG VSRNFLFQLV SDIDAEYFPP
401: REDVILQNEA PTDLYILVSG AVDFTAYIDG ENQVQGKSVV GDAFGEIAVL CSTPQPFTVR TTELSQILRV SKKSLMSAMR AHVEDGRIIM NNLFMKLRGQ
501: QSIAIDDANN QPEPDFLLQK WLSGGPKRGE GNASGQGKGH KYLQINDSES IDLESTRRTQ EHRVEIEEGG KENKDINGKS CSHADLTSFK FPSYPYCKFS
601: KQEAAKPEDR RVTIHLKSQG KDLSKLIILP ASMEDLMRLA GEKFGDRSFT MVTSAENAEI DDVNVIRDGD HLYFYISELE SIDS
Best Arabidopsis Sequence Match ( AT4G18290.1 )
(BLAST)
001: MSISCTRNFF KRFCVEEYNM DTFKHSSFLS ADLLPSLGAR INQSTKLRKH IISPFDPRFR GWEMWLVILV IYSAWICPFE FAFITYKKDA LFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDKPKKIA IRYLSTWFAF DVCSTAPFQS LSLLFKYNGS EIGFRVLSML RLWRLRRVSS LFARLEKDIR FNYFWTRCTK
201: LISVTLFAVH CAGCFAYLIA DQYHDPTKTW IGAVYPNFKE TSVWSRYVTA LYWSITTLTT TGYGDLHAEN PREMLFFVFF MLFNLGFTSY LIGNMTNLVV
301: HWTSRTRNFR DTVRAASEFA SRNQLPPNIQ DQMLSHICLK FKTEGLKQQE ALNGLPKAIR SSIANYLFFP IVQNVYLFHG VSRNFLFQLV SDIDAEYFPP
401: REDVILQNEA PTDLYILVSG AVDFTVYVGE EDQVQGKAVV GDAFGEIGVL CYTPQPFTVR TTELSQILRI SKKSLMSAMR AHVEDGRVIM NNLFMKLRGQ
501: QSIAIDDPNS EPESLLKEWL VGGSKTGEGN ASDQGHGHKY LQLHDSENID MGSTEWRDSR RSGYGETKRV REHTIEIEEG EKPNKEFDGK GCSDADLTSF
601: EFHSQEAYPY CRSNIQIKQH EAAKPKDKRV TIHLKSRDKD LSKLIILPAS IEELLRLAGE KFGYSFTKVT NAENAEIDDE DVIRDGDHLY ILINENS
Arabidopsis Description
KAT2potassium channel in Arabidopsis thaliana 2 [Source:TAIR;Acc:AT4G18290]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.