CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021279.1-P	Field mustard	nucleus	86.04	79.72
HORVU3Hr1G068040.1	Barley	plasma membrane	15.28	18.93
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	13.21	18.77
CDX71184	Canola	plasma membrane	24.91	17.98
CDX92017	Canola	plasma membrane	27.92	17.85
CDX74231	Canola	plasma membrane	27.74	17.73
CDY51528	Canola	cytosol	27.55	17.61
CDY28715	Canola	cytosol	27.55	17.59
Os04t0117500-00	Rice	plasma membrane	9.25	17.13
CDY32059	Canola	plasma membrane	26.04	16.87
PGSC0003DMT400037608	Potato	plastid	19.81	16.85
KRH61886	Soybean	plasma membrane	19.62	16.64
CDY13496	Canola	plastid	20.57	16.62
PGSC0003DMT400065964	Potato	cytosol, plastid	19.62	16.48
CDY03233	Canola	plasma membrane	20.38	16.46
CDX68872	Canola	plastid	20.19	16.44
Solyc01g010080.2.1	Tomato	plastid	19.43	16.4
CDY33464	Canola	cytosol, plasma membrane, plastid	20.57	16.37
Solyc08g068000.1.1	Tomato	plasma membrane	19.81	16.33
CDY35154	Canola	plasma membrane	20.19	16.29
CDY62359	Canola	cytosol, plasma membrane, plastid	20.38	16.22
GSMUA_Achr1P05260_001	Banana	plasma membrane	19.25	16.11
VIT_04s0008g04510.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	19.06	16.01
CDX75267	Canola	plastid	19.62	15.98
CDX72366	Canola	plastid	19.43	15.97
GSMUA_Achr5P09770_001	Banana	plasma membrane	19.43	15.77
CDX78839	Canola	plasma membrane	20.19	15.64
TraesCS3A01G245200.1	Wheat	mitochondrion	17.74	15.64
TraesCS3D01G246300.1	Wheat	plastid	17.55	15.63
CDX99479	Canola	plasma membrane	20.19	15.62
Os06t0254200-00	Rice	plasma membrane, plastid	17.74	15.41
CDX79135	Canola	plasma membrane	22.64	15.23
KRH52547	Soybean	cytosol	16.79	14.98
EES07044	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	16.98	14.97
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	17.92	14.84
OQU87429	Sorghum	mitochondrion	17.36	14.72
CDY10020	Canola	cytosol	9.43	14.66
Zm00001d016987_P001	Maize	plasma membrane	16.23	14.6
Zm00001d011729_P002	Maize	cytosol	16.98	14.22
CDX82921	Canola	cytosol	22.64	13.92
CDX76529	Canola	plasma membrane	18.68	13.9
TraesCS3B01G274500.1	Wheat	plastid	16.6	13.6
CDX68851	Canola	plasma membrane	21.32	13.19
CDX75249	Canola	plasma membrane	21.32	12.9
CDY35373	Canola	cytosol, plasma membrane, vacuole	20.75	12.79
CDY55714	Canola	cytosol, plasma membrane, vacuole	20.57	12.66
CDX76746	Canola	cytosol	20.0	12.06
CDY11516	Canola	cytosol	19.81	11.97
CDY34066	Canola	endoplasmic reticulum, plasma membrane	13.4	11.74

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:A0A078J7W9	UniProt:A0A078J7W9
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY61287	ProteinID:CDY61287	ProteinID:CDY61287.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005249	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0071805	EnsemblPlantsGene:GSBRNA2T00033638001
InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR036770	InterPro:K_chnl_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG
PFAM:PF07885	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50297	PANTHER:PTHR10217	PANTHER:PTHR10217:SF514
InterPro:RmlC-like_jellyroll	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI0004EDDF2E
InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:	:	:

Description

BnaA01g36910DBnaA01g36910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7W9]

Coordinates

chrLK033979:-:29360..32009

Molecular Weight (calculated)

60575.9 Da

IEP (calculated)

6.745

GRAVY (calculated)

0.101

Length

530 amino acids

Sequence
(BLAST)

001: MLFARNLIWF YLLGIFATYS SVMAPLTCAF NAEEDLPYQI IIVMEFAFIV DILRGWIYAY HDNQPIANDR FLHWCYRIWL LNPRKLELVA VAAVPLANIL
101: QWEYLRWINI VRAMRGKELL EKLEKVESFN YAFIMFIKIM AIQLYCIHTT GCMFYQLATD FEGLPQIYQT WMSDIQIGNQ NLSGLGNVQK YIASTYFATV
201: TLSTVGYGDI HATNLTEMVA LACLIIVSLT VWTYLGVQLA NLFGRRSKKQ IVGEKMDNLE KYLKEAKIAE NLAEDIRGHM QMKYSDDFDR KILEDVPACL
301: IAKINKNFNE SIIRSVSLFN GCSPEFFKHL ASGAQQDFHP PGCTVLKEGN IVSQLHILYK GGLELLQGGT VHPPLTRPTT VFGLESFVLN EPLPHTIRTY
401: KASKFLIISK KYFMECLHNY LEDGASVMKN LSNVRRDPAF VERLLQSVFG IQMQNDVIRK ASLLNHAIFF DDLEKVKKLI HWGVSVDSVD YNNIKPLDFA
501: INTGNTEIIK FLMSVVAETN TTGIDQEHAD

Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.