CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
EES03354
EES19575
KXG22060
KXG22062
KXG22064
OQU87011

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32650.1	EES03354	AT2G26650.1	12678562
AT4G32650.1	EES03354	AT2G26650.1	15299147
AT4G32650.1	EES19575	AT4G22200.1	12678562
AT4G32650.1	KXG22060	AT4G22200.1	12678562
AT4G32650.1	KXG22062	AT4G22200.1	12678562
AT4G32650.1	KXG22064	AT4G22200.1	12678562
AT4G32650.1	OQU87011	AT5G14570.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	81.44	79.53
Zm00001d011729_P002	Maize	cytosol	79.04	78.04
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	38.88	65.15
HORVU3Hr1G068040.1	Barley	plasma membrane	40.48	59.11
Os04t0117500-00	Rice	plasma membrane	25.76	56.29
Os06t0254200-00	Rice	plasma membrane, plastid	54.08	55.41
TraesCS3D01G246300.1	Wheat	plastid	51.84	54.45
TraesCS3A01G245200.1	Wheat	mitochondrion	51.04	53.08
GSMUA_Achr1P05260_001	Banana	plasma membrane	50.72	50.08
EES07044	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	47.68	49.58
GSMUA_Achr5P09770_001	Banana	plasma membrane	49.28	47.17
Solyc01g010080.2.1	Tomato	plastid	47.2	46.97
PGSC0003DMT400065964	Potato	cytosol, plastid	47.2	46.75
PGSC0003DMT400037608	Potato	plastid	45.6	45.75
VIT_04s0008g04510.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	46.08	45.64
TraesCS3B01G274500.1	Wheat	plastid	46.24	44.67
Solyc08g068000.1.1	Tomato	plasma membrane	45.28	44.01
Bra037049.1-P	Field mustard	plastid	44.16	42.79
Bra011367.1-P	Field mustard	plastid	44.16	42.4
CDX68872	Canola	plastid	44.16	42.4
CDX75267	Canola	plastid	43.84	42.09
CDY13496	Canola	plastid	43.84	41.77
KRH61886	Soybean	plasma membrane	41.6	41.6
AT4G32650.1	Thale cress	plastid	43.68	41.24
CDX72366	Canola	plastid	41.12	39.84
EES01496	Sorghum	mitochondrion, plasma membrane	33.44	39.43
KRH52547	Soybean	cytosol	36.96	38.89
KXG22062	Sorghum	plastid	9.12	35.85
EES06576	Sorghum	plasma membrane	39.68	34.02
EES03354	Sorghum	plastid	41.92	29.6
EER95927	Sorghum	plastid	39.84	27.09
EES19575	Sorghum	plastid	35.2	26.28
KXG22064	Sorghum	plastid	34.4	25.53
KXG22060	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	26.88	24.17
EES10868	Sorghum	cytosol	25.6	22.07
KXG19708	Sorghum	cytosol	27.52	20.14
CDY61287	Canola	plasma membrane	14.72	17.36
Bra021279.1-P	Field mustard	nucleus	14.24	15.56
CDY10020	Canola	cytosol	6.72	12.32

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	UniProt:A0A1W0VZ81	GO:GO:0003674	GO:GO:0005215
GO:GO:0005216	GO:GO:0005249	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
GO:GO:0071805	InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789	InterPro:Ion_trans_dom	InterPro:KHA_dom
InterPro:K_chnl_volt-dep_EAG/ELK/ERG	EnsemblPlants:OQU87429	ProteinID:OQU87429	ProteinID:OQU87429.1	PFAM:PF00520	PFAM:PF11834
PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF537	InterPro:RmlC-like_jellyroll
SMART:SM00100	EnsemblPlantsGene:SORBI_3003G278200	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI0001A8483C
RefSeq:XP_002456254.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:61419722..61422500

Molecular Weight (calculated)

69874.2 Da

IEP (calculated)

8.465

GRAVY (calculated)

0.040

Length

625 amino acids

Sequence
(BLAST)

001: MARRRAGPET GSWTLSSNLL PALGEVSSPS VGNNTINPCD CRYRWWQASL IVLVLYSAWS SPFELALEKA ATTPLLVVDL IVDVFFAVDI AVSFFVAYFH
101: RSVNLFVDDR RKIATRYLTR PSFAMDVAST IPFHVIYRLV SGRSTGFRYL NLLRLWRLQR VSKLFARLEK DIRLDYFYTR LIKLCGVTLL AVHSSACIFL
201: WMAFHHHGHG DEDEDSAAHT WLGSQVRDFR GRSVWVSYTY AVYWSTATLA TVGYGDVHAV NPGEMVFATC YMLFNIGLTS YIIGNMTSLV VHAATNTFEM
301: RDVVRRVSAF VSANRLPPEL RAQMMASAQL RFSTGEVIQQ QLLSDLPAAL RSRVAHHLFR DSVQRCYLFQ GVSNDLVLQL VSEMRAEYFP PNADIVLQKV
401: TSTDCYIIVS GAVLVMKMGA HGMAGEMGVI LGVPQPFTVR SSRLTQAVCI SHTRLLQILR SNTADANTVY ANFVQHLKSL KEEVAADAQL FEEILSKTSM
501: DELQIGAIFQ KQHQNGDSGA RMVPSQNQNP SFGTEQHEET APCMSPRRHR GLRVVIHDSF PSDGAEKHRS RAAGKLVLLP DSLQELMKVA EAKFGKAARR
601: VLTVDGAEVD DVAVLRDGDH LVLSW

Best Arabidopsis Sequence Match ( AT4G32650.1 )
(BLAST)

001: MSTTTTEARS PLPLLLRRGR SSTALSASTA EARSPLSILQ FRRRSSKDVR NITSVSSSLL PAFGTFIEDD NPSSKPFIVL HFDRRYRLWE LFLVILVGYS
101: AWASLFELAF EKAAEGALLT IDLVVDFFFA VDIILTFFVS YLDNTTYLNV TDHKLIAKRY LKSVAFVMDV ASTLPIQFIY KTITGDVGRG QAFGFLNLLR
201: LWRLRRVAEL FKRLEKDAHF NYFVIRVIKL LCVTIFWIHL AGCILYWIAY HYPRPTDTWI GSQVEDFKER SVWLGYTYSM YWSIVTLTTV GYGDLHAVNS
301: REKTFNMFYM LFNIGLTSYI IGIMTNLVVH GALRTFAMRS AINDILRYTS KNRLPDTMRE QMLAHMQLKF KTAELRQEEV LQDLPKAIRS SINQHLFRSI
401: IEEAYLFKGF PEGLLVQLVS QIQAEYFPPK MEIILQNEIP TDFYVIVSGG VDIIASKGVS EQVLAKLGPG SMAGEIGVVF NIPQPFTVRT RRLSQVIRIG
501: HHKFKEMVQS DNDVDAKMII ANFMTYLKGL NDELKKEIPF LRDLLDDADA QVQETVQSEE TPQSNDEEIV TVSRHENGQI EERRREGVPK RVIIHGQAPP
601: NQDNKNNGDS NGRLIILPDS IQLLFDLAEK KLGKRGSTIA MADGAHVEQI DALRENDHLY IF

Arabidopsis Description

KAT3KC1 [Source:UniProtKB/TrEMBL;Acc:A0A178UVX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.