Factsheet for Bra037049.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
vacuole 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012858.1-P
Bra013599.1-P
Bra023475.1-P
Bra032037.1-P
Bra036819.1-P
Bra038892.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32650.1	Bra032037.1-P	AT2G26650.1	12678562
AT4G32650.1	Bra032037.1-P	AT2G26650.1	15299147
AT4G32650.1	Bra012858.1-P	AT3G51300.1	15299147
AT4G32650.1	Bra036819.1-P	AT3G51300.1	15299147
AT4G32650.1	Bra038892.1-P	AT3G51300.1	15299147
AT4G32650.1	Bra013599.1-P	AT4G22200.1	12678562
AT4G32650.1	Bra023475.1-P	AT5G14570.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13496	Canola	plastid	98.91	97.26
Bra011367.1-P	Field mustard	plastid	86.82	86.02
AT4G32650.1	Thale cress	plastid	85.43	83.23
HORVU3Hr1G068040.1	Barley	plasma membrane	35.97	54.21
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	31.16	53.89
GSMUA_Achr1P05260_001	Banana	plasma membrane	51.16	52.13
GSMUA_Achr5P09770_001	Banana	plasma membrane	52.09	51.45
Os04t0117500-00	Rice	plasma membrane	22.33	50.35
Os06t0254200-00	Rice	plasma membrane, plastid	44.81	47.38
TraesCS3D01G246300.1	Wheat	plastid	43.26	46.89
TraesCS3A01G245200.1	Wheat	mitochondrion	43.41	46.59
OQU87429	Sorghum	mitochondrion	42.79	44.16
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	42.95	43.28
Zm00001d011729_P002	Maize	cytosol	41.71	42.5
Zm00001d016987_P001	Maize	plasma membrane	37.98	41.6
EES07044	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	38.14	40.93
Bra017567.1-P	Field mustard	plasma membrane	40.16	39.42
TraesCS3B01G274500.1	Wheat	plastid	38.91	38.79
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	38.91	37.69
Bra013296.1-P	Field mustard	plasma membrane	40.0	37.55
Bra021012.1-P	Field mustard	plasma membrane	37.21	33.71
Bra032037.1-P	Field mustard	cytosol	40.47	30.35
Bra013599.1-P	Field mustard	cytosol	38.6	28.89
Bra011351.1-P	Field mustard	cytosol	38.45	28.31
Bra007785.1-P	Field mustard	cytosol	37.98	28.29
Bra001068.1-P	Field mustard	plasma membrane	28.22	23.88
Bra036395.1-P	Field mustard	cytosol	29.77	23.5
Bra040606.1-P	Field mustard	cytosol, plasma membrane, vacuole	29.92	23.28
Bra021279.1-P	Field mustard	nucleus	15.5	17.48

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	EnsemblPlantsGene:Bra037049	EnsemblPlants:Bra037049.1
EnsemblPlants:Bra037049.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	GO:GO:0071805	InterPro:IPR000595
InterPro:IPR014710	InterPro:IPR021789	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M4F7I8
PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490
PANTHER:PTHR10217	PANTHER:PTHR10217:SF537	InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324
TMHMM:TMhelix	UniParc:UPI0002541057	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:

Description

AT4G32650 (E=4e-290) ATKC1, KAT3 | ATKC1 (ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1); cyclic nucleotide binding / inward rectifier potassium channel

Coordinates

chrA03:-:28700053..28703859

Molecular Weight (calculated)

73991.0 Da

IEP (calculated)

8.191

GRAVY (calculated)

-0.033

Length

645 amino acids

Sequence
(BLAST)

001: MSMTTSEARS PVPLLLRRGR SSTALGTPEE RSPSSLLFRR RSSKDVGNIT SVSSNLLPAF GTVIENDNNP SSKSFIVLPY DRRYRLWELL LVILVGYSAW
101: ASLFELAFEK AADGAIPTVD LVVDFFFAVD IALTFFVAYL DTSTYLIVDD HKLIARRYLK SVAFVMDVLS TLPIQFIYKA ITGNIGRGQA FGFLNLLRLW
201: RLRRVAELFK RLEKDTLFNY FVVRVIKLLC VTIFWVHTAG CILFWIAYHY PRPVDTWIGS QVEDFKERSI WLGYTYSMYW SIVTLTTVGY GDLHAVNTRE
301: KTFNMFYMLF NIGLAAYIIG NMTNLVVHSA LRTFTMRSAI NQILRYTNKN KLPDMMREQM LAHMQLKFKT AELKQEEVLQ DLPKAIRSSI NEHLFRSVIE
401: NAYLFKGFPD GLIIQLVSHI KAEYFPPKME IILQNEIPTD FYIIVSGGVV LAKLGPGDMV GEIGVVFNIP QPFTVRTRRL SQVIRISHHK FKEMVQSDVD
501: DAKMIITNFM AYLKELNDEL KKEIPFLRDL LANADAQEMV HTEESQQSYN EEMVTFSRDE NENKEEPKRE GVPKRVIIHG HPPNQDNNKN GDSNGRLIIL
601: PDSLPLLFDL AEKKLGKRGS TIVMVDGAHV EQLDVLREND HLYIF

Best Arabidopsis Sequence Match ( AT4G32650.1 )
(BLAST)

001: MSTTTTEARS PLPLLLRRGR SSTALSASTA EARSPLSILQ FRRRSSKDVR NITSVSSSLL PAFGTFIEDD NPSSKPFIVL HFDRRYRLWE LFLVILVGYS
101: AWASLFELAF EKAAEGALLT IDLVVDFFFA VDIILTFFVS YLDNTTYLNV TDHKLIAKRY LKSVAFVMDV ASTLPIQFIY KTITGDVGRG QAFGFLNLLR
201: LWRLRRVAEL FKRLEKDAHF NYFVIRVIKL LCVTIFWIHL AGCILYWIAY HYPRPTDTWI GSQVEDFKER SVWLGYTYSM YWSIVTLTTV GYGDLHAVNS
301: REKTFNMFYM LFNIGLTSYI IGIMTNLVVH GALRTFAMRS AINDILRYTS KNRLPDTMRE QMLAHMQLKF KTAELRQEEV LQDLPKAIRS SINQHLFRSI
401: IEEAYLFKGF PEGLLVQLVS QIQAEYFPPK MEIILQNEIP TDFYVIVSGG VDIIASKGVS EQVLAKLGPG SMAGEIGVVF NIPQPFTVRT RRLSQVIRIG
501: HHKFKEMVQS DNDVDAKMII ANFMTYLKGL NDELKKEIPF LRDLLDDADA QVQETVQSEE TPQSNDEEIV TVSRHENGQI EERRREGVPK RVIIHGQAPP
601: NQDNKNNGDS NGRLIILPDS IQLLFDLAEK KLGKRGSTIA MADGAHVEQI DALRENDHLY IF

Arabidopsis Description

KAT3KC1 [Source:UniProtKB/TrEMBL;Acc:A0A178UVX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.