Factsheet for Bra038892.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra011367.1-P
Bra037049.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51300.1	Bra011367.1-P	AT4G32650.1	15299147
AT3G51300.1	Bra037049.1-P	AT4G32650.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33284	Canola	cytosol, plastid	100.0	100.0
Bra036819.1-P	Field mustard	cytosol, plastid	97.46	97.46
Bra017740.1-P	Field mustard	cytosol	97.46	97.46
Bra012858.1-P	Field mustard	cytosol, plastid	97.46	97.46
Bra040869.1-P	Field mustard	cytosol	85.28	96.0
AT3G51300.1	Thale cress	cytosol, plastid	95.43	95.43
KRH08028	Soybean	cytosol	95.43	95.43
Bra011651.1-P	Field mustard	cytosol	95.43	95.43
KRH28825	Soybean	cytosol	94.42	94.42
KRH76629	Soybean	cytosol	94.42	94.42
Bra002093.1-P	Field mustard	cytosol	93.91	93.91
KRH69754	Soybean	cytosol	93.91	93.91
Bra037248.1-P	Field mustard	cytosol	93.4	93.4
Solyc02g062020.2.1	Tomato	plastid	92.39	92.39
PGSC0003DMT400009227	Potato	cytosol	92.39	92.39
PGSC0003DMT400061371	Potato	cytosol	92.39	92.39
PGSC0003DMT400058108	Potato	cytosol	91.88	91.88
Solyc02g083580.2.1	Tomato	nucleus	91.88	91.88
VIT_04s0023g03860.t01	Wine grape	cytosol	90.36	90.82
Bra003739.1-P	Field mustard	cytosol	87.82	88.72
Bra011578.1-P	Field mustard	cytosol	88.32	87.88
Bra016477.1-P	Field mustard	cytosol	87.31	87.76
Bra008227.1-P	Field mustard	cytosol	87.31	87.76
Bra012210.1-P	Field mustard	cytosol	86.29	86.29
Bra015807.1-P	Field mustard	cytosol	85.79	86.22
Bra001994.1-P	Field mustard	cytosol, nucleus, plastid	85.79	84.92
Solyc03g033420.2.1	Tomato	cytosol	80.2	80.2
Bra025045.1-P	Field mustard	cytosol	79.19	77.61
Bra022004.1-P	Field mustard	cytosol	78.17	76.62
Bra035878.1-P	Field mustard	cytosol	76.65	73.66
Bra013050.1-P	Field mustard	cytosol	57.36	72.44
Bra004857.1-P	Field mustard	plastid	75.63	70.62
Bra010128.1-P	Field mustard	cytosol	74.11	70.19
Bra013051.1-P	Field mustard	cytosol	68.53	69.59
Bra029240.1-P	Field mustard	cytosol	75.13	68.84
Bra011072.1-P	Field mustard	cytosol	72.59	68.42

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra038892	EnsemblPlants:Bra038892.1	EnsemblPlants:Bra038892.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	UniProt:M4FCS3	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF179	SMART:SM00173
SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho
TIGRFAMs:TIGR00231	UniParc:UPI00025453BA	SEG:seg	:	:	:

Description

AT2G17800 (E=9e-097) ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC1; GTP binding

Coordinates

chrA01:-:12712751..12713798

Molecular Weight (calculated)

21651.1 Da

IEP (calculated)

9.337

GRAVY (calculated)

-0.072

Length

197 amino acids

Sequence
(BLAST)

001: MSASRFVKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GATVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELKHYAPG VPIILVGSKL DLRDDKQFFI DHPGAVPIST AQGEELKKLI EAPFYIECSS KSQENVKAVF DAAIRVVLQP PKQKKKKSKA QKACSIL

Best Arabidopsis Sequence Match ( AT2G17800.1 )
(BLAST)

001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GATVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELKHYAPG VPIVLVGTKL DLRDDKQFFI DHPGAVPITT AQGEELKKLI GAPAYIECSS KTQENVKGVF DAAIRVVLQP PKQKKKKSKA QKACSIL

Arabidopsis Description

ARAC1ROP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.