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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • cytosol 3
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13528 Canola cytosol 99.49 99.49
CDY39066 Canola cytosol 99.49 99.49
AT1G75840.1 Thale cress cytosol 98.98 98.98
Bra016477.1-P Field mustard cytosol 97.96 97.96
Bra003739.1-P Field mustard cytosol 96.94 97.44
Bra012210.1-P Field mustard cytosol 96.43 95.94
Bra015807.1-P Field mustard cytosol 95.41 95.41
VIT_18s0001g14670.t01 Wine grape cytosol 92.86 92.39
KRH51687 Soybean cytosol, nucleus, plastid 92.35 91.88
KRH61024 Soybean cytosol 91.33 91.33
KRH61026 Soybean cytosol, nucleus, plastid 91.33 90.86
TraesCS6D01G068500.2 Wheat cytosol 90.31 89.85
TraesCS6B01G094700.2 Wheat cytosol 90.31 89.85
TraesCS6A01G070700.2 Wheat cytosol 90.31 89.85
Zm00001d015036_P005 Maize cytosol 89.8 89.34
Os02t0120800-01 Rice plasma membrane 89.8 89.34
EES06186 Sorghum cytosol 89.8 89.34
Bra040869.1-P Field mustard cytosol 79.08 88.57
Bra038892.1-P Field mustard cytosol, plastid 87.76 87.31
Bra017740.1-P Field mustard cytosol 87.76 87.31
Bra011651.1-P Field mustard cytosol 87.76 87.31
Bra002093.1-P Field mustard cytosol 87.76 87.31
Bra011578.1-P Field mustard cytosol 87.76 86.87
Bra036819.1-P Field mustard cytosol, plastid 87.24 86.8
Bra037248.1-P Field mustard cytosol 87.24 86.8
Bra012858.1-P Field mustard cytosol, plastid 87.24 86.8
Bra001994.1-P Field mustard cytosol, nucleus, plastid 86.73 85.43
Bra025045.1-P Field mustard cytosol 82.65 80.6
Bra022004.1-P Field mustard cytosol 81.63 79.6
Bra035878.1-P Field mustard cytosol 78.57 75.12
Bra004857.1-P Field mustard plastid 80.1 74.41
Bra013050.1-P Field mustard cytosol 58.67 73.72
Bra010128.1-P Field mustard cytosol 77.55 73.08
Zm00001d053899_P001 Maize cytosol 85.71 72.41
Bra011072.1-P Field mustard cytosol 77.04 72.25
Bra029240.1-P Field mustard cytosol 78.06 71.16
Bra013051.1-P Field mustard cytosol 67.35 68.04
HORVU6Hr1G012690.3 Barley plastid 90.82 62.9
Protein Annotations
MapMan:27.4.1Gene3D:3.40.50.300EnsemblPlantsGene:Bra008227EnsemblPlants:Bra008227.1EnsemblPlants:Bra008227.1-PGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0007154GO:GO:0007165GO:GO:0007264GO:GO:0008150
GO:GO:0009987GO:GO:0016020GO:GO:0016787InterPro:IPR003578UniProt:M4CVI0InterPro:P-loop_NTPase
PFAM:PF00071PRINTS:PR00449PFscan:PS51420PANTHER:PTHR24072PANTHER:PTHR24072:SF249SMART:SM00173
SMART:SM00174SMART:SM00175SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseInterPro:Small_GTPase_Rho
TIGRFAMs:TIGR00231UniParc:UPI0002545D3CSEG:seg:::
Description
AT1G75840 (E=2e-104) ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5); GTP binding / GTPase
Coordinates
chrA02:+:13951605..13952800
Molecular Weight (calculated)
21751.3 Da
IEP (calculated)
9.687
GRAVY (calculated)
-0.132
Length
196 amino acids
Sequence
(BLAST)
001: MSASRFIKCV TVGDGAVGKT CMLISYTSNT FPTDYVPTVF DNFSANVVVD GNTVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENIAKKW
101: IPELRHYAPG VPIILVGTKL DLRDDKQFFI DHPGAVPITT NQGEELKKLI GSPIYIECSS KTQQNVKAVF DAAIKVVLQP PKSKKKKKNK NRCVFL
Best Arabidopsis Sequence Match ( AT1G75840.1 )
(BLAST)
001: MSASRFIKCV TVGDGAVGKT CMLISYTSNT FPTDYVPTVF DNFSANVVVD GNTVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVAKKW
101: IPELRHYAPG VPIILVGTKL DLRDDKQFFI DHPGAVPITT NQGEELKKLI GSPIYIECSS KTQQNVKAVF DAAIKVVLQP PKQKKKKKNK NRCVFL
Arabidopsis Description
ARAC5Rac-like GTP-binding protein ARAC5 [Source:UniProtKB/Swiss-Prot;Acc:Q38937]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.