Factsheet for Bra004857.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005107.1-P
Bra010847.1-P
Bra013329.1-P
Bra038448.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G44690.1	Bra010847.1-P	AT1G29170.1	17267444
AT2G44690.1	Bra005107.1-P	AT2G38440.1	17267444
AT2G44690.1	Bra038448.1-P	AT4G16340.1	17267444
AT2G44690.1	Bra013329.1-P	AT4G18600.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71169	Canola	plastid	99.05	99.05
AT2G44690.1	Thale cress	plastid	86.26	87.08
VIT_15s0021g01130.t01	Wine grape	cytosol	81.52	86.87
Solyc01g088780.2.1	Tomato	cytosol	82.94	84.13
PGSC0003DMT400004254	Potato	cytosol	82.46	83.65
Bra003739.1-P	Field mustard	cytosol	74.88	81.03
Bra016477.1-P	Field mustard	cytosol	74.41	80.1
Bra008227.1-P	Field mustard	cytosol	74.41	80.1
Bra015807.1-P	Field mustard	cytosol	73.93	79.59
Bra040869.1-P	Field mustard	cytosol	64.93	78.29
Bra012210.1-P	Field mustard	cytosol	72.99	78.17
Bra011578.1-P	Field mustard	cytosol	72.99	77.78
Bra011651.1-P	Field mustard	cytosol	71.56	76.65
Bra002093.1-P	Field mustard	cytosol	71.56	76.65
Bra001994.1-P	Field mustard	cytosol, nucleus, plastid	72.04	76.38
Bra017740.1-P	Field mustard	cytosol	71.09	76.14
Bra037248.1-P	Field mustard	cytosol	71.09	76.14
Bra038892.1-P	Field mustard	cytosol, plastid	70.62	75.63
Bra012858.1-P	Field mustard	cytosol, plastid	70.62	75.63
Bra036819.1-P	Field mustard	cytosol, plastid	70.14	75.13
Bra025045.1-P	Field mustard	cytosol	71.09	74.63
Bra022004.1-P	Field mustard	cytosol	70.14	73.63
Bra035878.1-P	Field mustard	cytosol	67.77	69.76
Bra013050.1-P	Field mustard	cytosol	50.71	68.59
Bra011072.1-P	Field mustard	cytosol	67.3	67.94
Bra010128.1-P	Field mustard	cytosol	66.35	67.31
Bra029240.1-P	Field mustard	cytosol	66.82	65.58
Bra013051.1-P	Field mustard	cytosol	58.29	63.4

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra004857	EnsemblPlants:Bra004857.1	EnsemblPlants:Bra004857.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	UniProt:M4CKX1
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF160
SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI0002547E26	SEG:seg	:	:

Description

AT2G44690 (E=3e-098) ARAC9, ATROP8, ROP8 | ARAC9; GTP binding

Coordinates

chrA05:+:2151542..2152819

Molecular Weight (calculated)

23136.8 Da

IEP (calculated)

9.383

GRAVY (calculated)

-0.081

Length

211 amino acids

Sequence
(BLAST)

001: MSASVAAASV STTTTAATTF IKCVTVGDGA VGKTCLLISY TSNTFPTDYV PTVFDNFSAN VLVDGKTVNL GLWDTAGQED YNRLRPLSYR GADVFILAFS
101: LISRPSFENI AKKWVPELRH YAPNVPIVLV GTKLDLREDK KFPMNYPGAC TISTEQGQEL RKEIGALAYI ECNSKTQQNV KAVFDAAIKV VLQPPSKTKK
201: QKRRFGFCHA L

Best Arabidopsis Sequence Match ( AT2G44690.1 )
(BLAST)

001: MSASMAATST SSATATTFIK CVTVGDGAVG KTCLLISYTS NTFPTDYVPT VFDNFNANVL VDGKTVNLGL WDTAGQEDYN RVRPLSYRGA DVFILAFSLI
101: SRPSFENIAK KWVPELRHYA PTVPIVLVGT KSDLRDNMQF PKNYPGACTI FPEQGQELRK EIGALAYIEC SSKAQMNVKA VFDEAIKVVL HPPSKTKKRK
201: RKIGLCHVL

Arabidopsis Description

ARAC9ROP8 [Source:UniProtKB/TrEMBL;Acc:A0A178VUK9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.