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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra004857.1-P
Bra017996.1-P

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78876 Canola nucleus 21.39 67.49
CDX99451 Canola nucleus 46.62 56.03
Zm00001d025835_P001 Maize cytosol 1.96 36.0
Zm00001d025836_P001 Maize cytosol 1.96 36.0
Zm00001d032131_P001 Maize cytosol, extracellular, plastid 1.96 31.25
AT4G18600.1 Thale cress nucleus 27.24 30.77
Bra010847.1-P Field mustard nucleus 9.12 21.77
Bra005450.1-P Field mustard nucleus 7.59 19.59
GSMUA_AchrUn_... Banana cytosol 8.64 17.32
TraesCS3B01G168100.1 Wheat cytosol 9.69 17.29
GSMUA_Achr2P15470_001 Banana nucleus 8.21 17.25
GSMUA_Achr10P... Banana cytosol 8.9 17.17
TraesCS3A01G134300.3 Wheat cytosol 9.47 16.91
HORVU3Hr1G029210.3 Barley cytosol 9.52 16.85
TraesCS3D01G150600.1 Wheat cytosol 9.43 16.84
Os01t0208600-01 Rice cytosol 9.43 16.19
Solyc02g076840.2.1 Tomato nucleus 9.17 16.14
KXG31590 Sorghum cytosol 9.56 15.96
Bra005107.1-P Field mustard cytosol 9.69 15.55
VIT_08s0058g00770.t01 Wine grape cytosol 0.96 15.49
Zm00001d008906_P003 Maize cytosol 8.69 14.27
Protein Annotations
Gene3D:1.20.5.340Gene3D:1.20.58.1570MapMan:20.2.2.2.4EnsemblPlantsGene:Bra013329EnsemblPlants:Bra013329.1EnsemblPlants:Bra013329.1-P
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005856GO:GO:0008150GO:GO:0009987
GO:GO:0016043GO:GO:0030036UniProt:M4DA19PANTHER:PTHR12902PANTHER:PTHR12902:SF1InterPro:SCAR/WAVE_fam
UniParc:UPI0002546260SEG:seg::::
Description
AT4G18600 (E=0.0) WAVE5, ATSCAR-LIKE, SCARL | WAVE5; protein binding
Coordinates
chrA01:-:5014135..5022197
Molecular Weight (calculated)
250086.0 Da
IEP (calculated)
4.062
GRAVY (calculated)
-0.523
Length
2291 amino acids
Sequence
(BLAST)
0001: MPLVRFKIRN ELSLGGPELN RSPAVEYEEP KAILGAVEVA GLVGILRQLG DLAEFSAEVF NGIQEEVTVT ASRCQKLTSR VKRIESALSP LEKAVLSQTS
0101: HIHFAYTAGC EWHPRIRNGQ RHFVQSDLPL CVMETYEQCR DPPPLHLLDR FDAGGPGSCL RKYSDPTFFR KELGNHSKVD DVKAQKDQAH RKRKKKRLPQ
0201: RNICRSRAVS TSDDTNGARL SSLTDDIPTT SQSTSTVDMP RSSNMQDLSG SIDQSHLQEQ SNSQEQSEAQ VQSDLQESSR PRDSVTGSGY IEYVINHSPV
0301: NKPDVKLLEG SLPSSLQPAD RIGSTVPQGR VEIVDDNILY SPSKEIPVPY ASIVCDEKKE ALESRAEKSN KDEEASEIHE PKIGPGTPDR VKQNQRDFDR
0401: TYDFFDVVGE KQSKSQANSI DEKPRIESEE ENTSEADEFV DARNTIESES ESEFDGIPKP KLEHYFGDIS TYCSEDASSD NNGGSEDIPY EEMVEDLRHE
0501: NSLDESCSVS YLSDDASVSC CQSDPVCGKV LSHDGTFQSP RDFSAMRPSL LAEAAFQDET ILREPVAAHP LLAGDCANEK ISSEERISSG MSLKDAIPAE
0601: KILPEEHLAK YPSLAEAVPH EKSLPGESVA KYPSFEEIAP FERILPESSL SKIRSLAEAV PDNMAPAEER GAAHPSFPKA VQEKKISPEV LDSTNLSGTV
0701: PEAVSEEQIS VEGCVGVSPC LAEVVPDERF LTEEPEEAAT ACMSLSKVMP AEKLFPEKTL EAPQDLAELP EENIVREKSV DYTHPSCAKA VSPKENLSPQ
0801: VLDSANLSVA EAVSHDQIRL DESGGKNPCL AEAVSDENFL TGEREEAATT CTTSSKVMPV EKLLPEKPLE AHHYLPELPQ EKILPEKSVG SAPPDENLSP
0901: EVLDSTNVSV AEAVPQEQIG LGEFLGIDAC LAKAVPDERG LPEEPVTTCV SLTKAGANEK TLPEEPLETY PLAELPEEKI SHEETDDATH PFESVIDEES
1001: SPEVSCLSLE EALPQEQISL EEFVSIDPCL AKAVPDEWLS PEEGVTTCLS LKKAATIEEV LPEKSLETYS FFAELPEEKI VHEEVDDATH PSVSKSVSDE
1101: KILPEILEST NFPVATALPQ EQTLLEEFVG NPYPTEAVVD KRVLPEEPVT TCLSLKKAAT VEGVLPEKPS ETYPSFGEFP DEKIVLQEAD DATHLSVSEA
1201: VGDEKISPEV PDSTNFPAAA ALPQEQIVEE FVGNPCMTEA VPDKRILPKE PVTTCLSLTR AATIEGALPE KPLETYPPFA ELPKEEIVFK EADDATHPSV
1301: SEAISDEQIS PVVLHSEKFP AAEAPLQEKI VLEEFAANLC LTEAVLDKRV LPEEPVTTCL SLTKDATIEE VLPEKPLETY SSIAELPEET VVQDEADYTT
1401: HPSVSGAGID EKFSPEVRDS TIFPVTAALQ QEQILLEEFV GNPYLAEAVP DSKVLPEEPV TTGMSLTKPE PIQELLPEES LEAYASLEKS SKGKISLEKS
1501: DDEIHPSCAE AESDKNVVPD VLDSENLSVS EAITQEQIEI EEFVGVDPCF AEAVPDERVL PEEAVSDEMI LPEEAVTTSL SLTKVAPIEK ILPAGLLDMY
1601: PSLEELPEER IPQEEEHDDD THPCFSEAVG DEKISLLEHP CSTYPSLEES VPHEKNSDEE IVGTNPFLEL AVPNVSSFPD THGITYQTSA EAVSKEKKLP
1701: EESLLTYPSL AEDLFDEKAS GSEAPGYTTE AGLRNTEEPV ASDLSLTESI LDEEIPGLEA PASTTETGPH NKSFPEETVA TYLSLAEAVP EEKIYLEETD
1801: TTCPPSAEAV FDEEISGSEA RGDTTEAGPH NNDEPLTTDL SLTESSFDEK IPGLEAPAST TETDPHGKTF SEEPVATYLS LQEPVRDDKV LPKEPAAAFL
1901: DLSEGIPDQQ VFLDDAAFLS FAEAIFDQKF SPEVPDSMDL PAKNTLEKEV ETSDGPIVEP VNIWSNGGLL GLAPSKPPVF AEPKSVSEHI QNEFNEASVI
2001: ATKKQGSSSR SVEDTEKSSL PLVVSDLTSQ QQSNMLSHSN GSLSPLQSTA TSFKVFGLSH RLLMAGFRGN TSSTYKFESI PTTSYDTKAA AIEDKTQQTP
2101: PRGPSFEEQL AYESSLFGSP TSSPPVEHMK ISFSPIDPSP VSKLKLRIPC QPQYNGENVD TLPSFQLVPE ASNSDNEDEN SDIFCQSSPG VSDNCLSDSE
2201: LWESDESPRE SASSLKQGGE RSTHGDMGSF SSLFLDLPCY DSVDHHSTSP RLDQEQEREQ VPEYKPSVSE IIRDWPPNQP NANASPKKTQ T
Best Arabidopsis Sequence Match ( AT4G18600.1 )
(BLAST)
0001: MPLVRFKIRN ELSLGGPEIQ RSASVEDEEP KAILGAVEVA GLIGILRQLG DLAEFSAEVF NGLQEEVTVT ASRCQKLTSR VRRIESALSP LEKAVLSQTS
0101: HIHFAYTAGS EWHPRIRNGH SHFVQSDLPL CVMESYEQCR DPPPLHLLDR FAVGGPGSCL RKYSDPTFFR KELSNPSKTD DIKVQRDQAH RKRKKKRLPQ
0201: RNICRSNAVS TSDETNGAHL SSFTDDRPTT SRSTSTVDMP RSSNMQDLSD IVDQSYLQGQ SGAQEQSEAQ VQSDFQESSK ARDSITGSGY IEYVINQSPV
0301: DKPEVKLVEG FLSGSLCPAD RIGSTVPEGC IEVVDDNILY SPSEDLLVPS ASNVCDEKKE TLESMVEKSR KDDEPSELHE SKFGPVTPDR VRQNQRDFDR
0401: TYILFDEVDI VGEKQSKSQA NNIDGTLGIE NEGEDKSEQE SEADEFVDAR NTIESESESD IDGVPKPKLE HYFGDISTYC SEDANSDNND GSEDITYEEM
0501: AHDPRHENSE DESCSGSYLP EDSNVSSCLS DPVCEETLFH DENSQKPWEF FTMCPSLLAE KAVPDVTILR EEPVMAHPLF AGDSANEKIS SEERIISCPS
0601: LKDAIPAEKI LPEEHLVNYP SLEAIPHEKI LPGESIAKYP SFAEIIPQEK ILSEKSLEEA VLDNMTPAGE PDAAHPSFPK AVQDKKISPE VLDSKIFSVP
0701: KAVSQEPISL EEFVRIHPCL AEAVPDERFL IEEPPSTCLS LTKAMPTEIL LPEKTLESSH YLEELPEEDI LQEKSVDSTH PSCAKAAAET NLSPEVLDST
0801: KLSVAEAVPQ EQVSLEEFVG INPCLVEAVP DERLLPEEPD TTYLSLTKAV AIEKVLSEEL LETYPSLAEL PEEEFLQEET DDATHTSEAV SDEEISQEVS
0901: DSTNLSLEEA LPLEHISHEE FVGIDQCLVE VAPEERFLPE EPVITCLSLT MEGVLSEKSP ETYPSLSELP EEKILDEEAD DAMHPCLSEA VSDEQSSPNV
1001: LGSTNSPVAE AVPQAQISVE EFVGIDPCLV EAVPDMRDLP EEHITSCIYL TNVVPIEEVL PEEPFEACAS LGKLPKDKIS QEESDEATHT LSCAKAESDE
1101: HVSLEVLNST NLSAAEAIPN EQVTLDEFVG IDPCLGEVVL DEEVLPEQLD TTCRSLTKAA PIMTIFPEEP PEVYPSLEEL PEEKIAQEEE VDDATHPYFS
1201: EAVCDEKIPP LEDPGSTHPS LEESVPYEEA SHEELVGTNP FLESAFPNEI GFPDEPGVTY RSSAEAVSKE KNLPEESLPT YPSWAEVVPD EKISREELDS
1301: TYPSSAEAVF DENISGSEAP GSTTETGRQN KTFPEKTFAT ENSLNEAVFD EKIPGSEAST STTETGPHNK TFPEEPFAME NFLNEAVFDE KIPGSEAPVS
1401: TTETGLHNET FTEEPVATDI SLNEAVFGEI IPGSEAPGSA TETGLHNKTF PEKPFATDLS LKEAVFDEKI PGSEASSSTT ETSPHNKTFP RETITTDLSS
1501: TEAVFDEKIT GSGVPSFTTE TGSHNKCFPE EPVPKENILP KEPAAAYLAL AEGIPDQKVF LDDAALLLFA EAIFDQKFSP EVPDSTYPSL KEPEMHVAAP
1601: CVVTDLPAKN IKVKEGEVHN EPYTASDVSM NQKSGLLEPE STERTFPSSG GTVTISPDTQ NSLPNGTSVE SISIWSNGGL LGLAPLKPPV FAEPNSGSQH
1701: IKHEINEASV LSTRKQESSS RSVENAEKSS LPLIVSDPTS QQQSNMSSLS PMQSTGTSFR VFGLSHRLLM AGFRGNSSST CKFESVPSSS YDTRVAAIED
1801: RTQQSPGGSS FEEQLDYESS LFGSPTSSPP VEHMKISFNP IEASPVPKLK LRIPCQPRYN GENADMFPSF QLVPEASNSD DGDDNSDTFC QSSPCVSDYC
1901: LSDSELWESD ESPRISVSSL KQVEERSRHG DMGSFSGSFL DLPCYDAVDH QSTFSRLEQE QVPEYKPSVS EIIRAWPPNQ PKSSPCNEAN VDANTVSKKT
2001: QDQSLGLVAT DDEGGDSVCL DEHKTKGI
Arabidopsis Description
WAVE5Scar-like domain-containing protein WAVE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPK0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.