Factsheet for Bra017996.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005107.1-P
Bra005368.1-P
Bra010847.1-P
Bra013329.1-P
Bra016738.1-P
Bra019815.1-P
Bra030221.1-P
Bra038448.1-P
Bra039922.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G49290.1	Bra016738.1-P	AT1G13180.1	17267444
AT3G49290.1	Bra019815.1-P	AT1G13180.1	17267444
AT3G49290.1	Bra010847.1-P	AT1G29170.1	17267444
AT3G49290.1	Bra030221.1-P	AT2G22640.1	17267444
AT3G49290.1	Bra039922.1-P	AT2G22640.1	17267444
AT3G49290.1	Bra005368.1-P	AT2G35110.1	17267444
AT3G49290.1	Bra005107.1-P	AT2G38440.1	17267444
AT3G49290.1	Bra038448.1-P	AT4G16340.1	17267444
AT3G49290.1	Bra013329.1-P	AT4G18600.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08121	Canola	nucleus	100.0	100.0
CDY05919	Canola	nucleus	98.42	99.05
AT3G49290.1	Thale cress	nucleus	92.11	93.59
Bra009748.1-P	Field mustard	nucleus	77.6	76.4
PGSC0003DMT400047722	Potato	nucleus	65.3	65.51
KRH64414	Soybean	nucleus	65.62	64.0
Solyc03g083030.2.1	Tomato	nucleus	65.3	63.69
KRH65850	Soybean	nucleus	63.72	62.35
VIT_16s0098g01720.t01	Wine grape	extracellular	67.82	58.27
KRH53518	Soybean	endoplasmic reticulum, golgi	66.25	57.22
GSMUA_Achr5P09600_001	Banana	nucleus	27.76	49.16
KRH65551	Soybean	cytosol, endoplasmic reticulum, extracellular	24.92	48.47
GSMUA_Achr1P28080_001	Banana	cytosol	43.22	42.15
Bra025451.1-P	Field mustard	nucleus	30.6	35.14
Bra028522.1-P	Field mustard	nucleus	31.55	34.84
Bra004555.1-P	Field mustard	nucleus	24.92	26.07
Bra000416.1-P	Field mustard	cytosol	23.66	24.67

Protein Annotations

EnsemblPlants:Bra017996.1	EnsemblPlants:Bra017996.1-P	EnsemblPlantsGene:Bra017996	InterPro:ABI	PANTHER:PTHR10460	PANTHER:PTHR10460:SF10
SEG:seg	UniParc:UPI000253F221	UniProt:M4DNA9	MapMan:20.2.2.2.5	:	:

Description

AT3G49290 (E=4e-140) ABIL2 | ABIL2 (ABL INTERACTOR-LIKE PROTEIN 2)

Coordinates

chrA06:-:9378110..9379605

Molecular Weight (calculated)

36412.8 Da

IEP (calculated)

9.784

GRAVY (calculated)

-0.921

Length

317 amino acids

Sequence
(BLAST)

001: MPESREASNY DEASMDQSML FSDGLKDLRN LRTQLYSAAE YFELSYTTDD KRQIVVETLK DYAVKALVNT VDHLGSITYK VNDFIDEKVD EVAETELRVS
101: CIEQRLRMCQ EYMDHEGRSQ QSLVIETPKF HKRYILPAGE TIKTTNLDKL KYFGSSLEDA DDWNQFRNAV RATIRETPPP PPPPPVRKST SQASSPRQPP
201: QRSATFSFTS TIPKKDQDKR SVSPHRFPLL RSGSVATRKS ASISRPTTPS KSRSITPIRY PSEPRRSASV RVGFEKENQK ETEQQQQPSK SKRLLKALLS
301: RRKTKKDDTL YTFLDEY

Best Arabidopsis Sequence Match ( AT3G49290.1 )
(BLAST)

001: MPASHEASNY DEVSMQQSML FSDGLQDLKN LRAQLYSAAE YFELSYTTDD KKQIVVETLK DYAVKALVNT VDHLGSVTYK VNDFIDEKVD EVSETELRVS
101: CIEQRLRMCQ EYMDHEGRSQ QSLVIDTPKF HKRYILPAGE IMTATNLEKL KYFGSSLEDA DDWNQFRNAV RATIRETPPP PVRKSTSQSS SPRQPPQRSA
201: TFSFTSTIPK KEQDKRSVSP HRFPLLRSGS VATRKSASIS RPTTPSKSRS ITPIRYPSEP RRSASVRVAF EKDNQKETEQ QQPSKSKRLL KALLSRRKTK
301: KDDTLYTFLD EY

Arabidopsis Description

ABIL2At3g49290 [Source:UniProtKB/TrEMBL;Acc:Q147L2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.