Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400047722 | Potato | nucleus | 96.31 | 99.05 |
| KRH64414 | Soybean | nucleus | 69.85 | 69.85 |
| KRH65850 | Soybean | nucleus | 68.0 | 68.21 |
| AT3G49290.1 | Thale cress | nucleus | 64.62 | 67.31 |
| CDX88092 | Canola | nucleus | 64.92 | 65.73 |
| CDY05919 | Canola | nucleus | 63.69 | 65.71 |
| Bra009748.1-P | Field mustard | nucleus | 64.92 | 65.53 |
| Bra017996.1-P | Field mustard | nucleus | 63.69 | 65.3 |
| CDY08121 | Canola | nucleus | 63.69 | 65.3 |
| AT5G24310.1 | Thale cress | nucleus | 64.31 | 65.11 |
| CDX80429 | Canola | nucleus | 64.92 | 64.92 |
| KRH53518 | Soybean | endoplasmic reticulum, golgi | 70.15 | 62.13 |
| VIT_16s0098g01720.t01 | Wine grape | extracellular | 70.15 | 61.79 |
| GSMUA_Achr5P09600_001 | Banana | nucleus | 29.85 | 54.19 |
| KRH65551 | Soybean | cytosol, endoplasmic reticulum, extracellular | 25.85 | 51.53 |
| GSMUA_Achr1P28080_001 | Banana | cytosol | 44.62 | 44.62 |
| Solyc08g082710.2.1 | Tomato | nucleus | 34.77 | 33.93 |
| Solyc01g095280.2.1 | Tomato | nucleus | 26.46 | 28.2 |
| Solyc12g007160.1.1 | Tomato | nucleus | 16.62 | 21.43 |
Protein Annotations
| EnsemblPlants:Solyc03g083030.2.1 | EnsemblPlantsGene:Solyc03g083030.2 | InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF10 | SEG:seg |
| UniParc:UPI0002768924 | UniProt:K4BI79 | MapMan:20.2.2.2.5 | : | : | : |
Description
No Description!
Coordinates
chr3:-:52861267..52865745
Molecular Weight (calculated)
36944.5 Da
IEP (calculated)
9.507
GRAVY (calculated)
-0.858
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: METLNSPATM TFPREPANFD EVSMHQSMLF SDSLKDLKNL RKQLYSAAEY FELSYSNDEQ KDVVVDTLKE YAIKALVNTV DHLGSVTYKV SDLLDEKVDE
101: VSGTELRISC IEQRLKTCQE YIDNEGMSQQ SLVIHTPKYH KRYILPVGET ADGGNLTKLQ YQGCSLDDQD DWNQFRNAVR ATIRETPPPA AGKGFSPSPT
201: PRLLQQYGKF SFSGTTPKKE LDKRTVSPHR FPLLRTASLA SRPTTPKSSR PTTPNKSRPT TPNPSNGRRY AAEPRKSASM RLYVDNINTK DPEQHSSKSK
301: RLLKSLLSRR KSKKDETLYT YIDEY
101: VSGTELRISC IEQRLKTCQE YIDNEGMSQQ SLVIHTPKYH KRYILPVGET ADGGNLTKLQ YQGCSLDDQD DWNQFRNAVR ATIRETPPPA AGKGFSPSPT
201: PRLLQQYGKF SFSGTTPKKE LDKRTVSPHR FPLLRTASLA SRPTTPKSSR PTTPNKSRPT TPNPSNGRRY AAEPRKSASM RLYVDNINTK DPEQHSSKSK
301: RLLKSLLSRR KSKKDETLYT YIDEY
001: MSAAATMPMP REASNYDEIS MQQSMLFSDS LKDLKNLRTQ LYSAAEYFEL SYTNDEQKQI VVETLKDYAI KALVNTVDHL GSVTYKVNDF VDEKVDEVAG
101: TELRVSCIEQ RLRMCQEYMD HEGRSQQSLV IDTPKFHKRY FLPSGEIKRG GNLAKLKNVE GSFDGEDDWN QFRNAVRATI RETPPPPVRK PILQSPSQRK
201: PQRSATFSFS SIATAPKKEQ DKRAVSPHRF PLLRSGSVAI RPSSISRPTT PSKSRAVTPT PKRYPSEPRR SASVRVAFEK EAQKEPEHQQ QPSKSKRLLK
301: ALLSRRKTKK DDTLYTYLDE Y
101: TELRVSCIEQ RLRMCQEYMD HEGRSQQSLV IDTPKFHKRY FLPSGEIKRG GNLAKLKNVE GSFDGEDDWN QFRNAVRATI RETPPPPVRK PILQSPSQRK
201: PQRSATFSFS SIATAPKKEQ DKRAVSPHRF PLLRSGSVAI RPSSISRPTT PSKSRAVTPT PKRYPSEPRR SASVRVAFEK EAQKEPEHQQ QPSKSKRLLK
301: ALLSRRKTKK DDTLYTYLDE Y
Arabidopsis Description
ABIL3Protein ABIL3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMC6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.