Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0058g00780.t01 | Wine grape | cytosol | 13.09 | 64.45 |
| KRH40820 | Soybean | cytosol | 20.89 | 26.18 |
| CDX91460 | Canola | cytosol | 20.48 | 24.96 |
| KRH00374 | Soybean | cytosol | 19.01 | 24.4 |
| KRH76068 | Soybean | cytosol | 24.06 | 24.2 |
| AT2G38440.1 | Thale cress | cytosol | 19.84 | 24.16 |
| Bra005107.1-P | Field mustard | cytosol | 20.13 | 24.02 |
| KRH65511 | Soybean | cytosol | 23.59 | 23.82 |
| CDY69042 | Canola | nucleus | 16.26 | 23.24 |
| GSMUA_Achr9P04670_001 | Banana | cytosol | 13.38 | 18.25 |
| Os03t0298700-01 | Rice | cytosol | 13.67 | 17.88 |
| Zm00001d047701_P002 | Maize | nucleus | 13.5 | 17.86 |
| EER92402 | Sorghum | nucleus | 13.62 | 17.83 |
| Zm00001d028803_P002 | Maize | nucleus | 12.44 | 17.77 |
| GSMUA_Achr6P32700_001 | Banana | cytosol | 14.96 | 17.3 |
| HORVU4Hr1G055030.24 | Barley | nucleus | 13.03 | 16.82 |
| TraesCS4D01G190300.1 | Wheat | nucleus | 12.73 | 16.64 |
| TraesCS4A01G115200.1 | Wheat | nucleus | 12.68 | 16.45 |
| Solyc02g076840.2.1 | Tomato | nucleus | 12.09 | 15.83 |
| TraesCS4B01G189000.1 | Wheat | nucleus | 7.45 | 10.83 |
Protein Annotations
| Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | MapMan:20.2.2.2.4 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030036 | InterPro:IPR003124 | UniProt:K4CRX2 | PFscan:PS51082 |
| PANTHER:PTHR12902 | PANTHER:PTHR12902:SF12 | InterPro:SCAR/WAVE_fam | EnsemblPlantsGene:Solyc09g014980.2 | EnsemblPlants:Solyc09g014980.2.1 | UniParc:UPI000276BB29 |
| InterPro:WH2_dom | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:7373131..7381944
Molecular Weight (calculated)
186707.0 Da
IEP (calculated)
4.337
GRAVY (calculated)
-0.610
Length
1704 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPVNRYQIRN EYSLADPELY KAADKDDPEA LLEGVAMAGL VGVLRQLGDL AEFASEIFHD LHEEVMATAA RGHSLTVRVK QLEADFPLIE SAFLSQTDHS
0101: SFFYNAGTDW HPNLRIDQNM VTRGDLPRFV MDSYEECRGP PRLFLLDKFD VAGAGACLKR YTDPSSFKVE TSSYAFTTSD VQREKKTRKT KKRGSRWRNG
0201: ETPEVLPTSH AKLHQLFLEE RIENGINVPA HRVKLKRKLN GFPFDPRTGK SYMNKFLEIS SPEHKVVHEV GIDSSPLRLP STDACETLAE TEDIRPPSPD
0301: KEVMRRNKRA SLSPSPPQSA ENNSLRPCLD EVNGDLSCYR VRGISRRSHR SQTTDILPSI HSLVDEKEIT VDGESRTEKG IGYESDDVAS EIDNYVDALT
0401: TMEAELETDS EQRDRRDLPF LNSKKQVLCL SSSSEKLQTQ SSDSHSIENS TLSDDGNSYS KKEISSFSCS DSPSTSVESV LLESEISSKG AKTSDTSCEQ
0501: QSVNEETQLP QPPEGGVYDR KCIIVAREPS GSCDSGMRAE TNENFITHGK SEDPLTTIAE DASSLHVSLP HAPVILDAPE QNGDDSPSRA SIDIKLTDGL
0601: VDQNLKLDEN VSCASSHSDV PYHATDNMPE SESPVIQHES NLYNDASLVN NLPITSELLN IPSEDRHEVL SADYQQLPNL DGEDPSVGDD SASLYNLPNC
0701: PSSEEGHTSP SLLAVNHPNH VDNGLDNENL NGSSVGSVQI LDVLGASDTD CGKHFTMSHD EIAEDACMKP HNISTKDIEA GDADKDHEDT CGAFSDGVMS
0801: EPGDLSTNCG GDGLDFVDVL NSQTSEIPND IQSLESGELN ISCSRQENPV EVSSLTKIDE KGSIAPSELL SGTVSTGSIA SRHLKSLTNK GILSDETVNK
0901: IDKSDVTDET ASLLAALADK ENFDDLSSSL DHKLFSEESV CSIGHSSQRE LEIDLSNSHA ESKFMTQRAN TPDSNSFVLD TSNCHHPESA VLDTPSGSEL
1001: SFDAENTMDS SAAPSQALLK KWCLDTEEVL SRRRNVADLT EDASSLQISP EEGKDELVDN QPNEELLHKV DLDQSPLLEK IQSHVDQVSD ASSLSFVANL
1101: PSQDAIPDVL AHNSNLVSEP LLTDYCAEET AESAIHEQVK REVLDSGEAK AEPLPQLTQS QLVDCFDIEQ SAEASSISSQ TVRPSHPSFP ELLSQSNQDS
1201: LSSLYKKDEE IASKVSDTER LIDEDTAKEV LLPQFEEARL SNHVDIVGAL DASSVPFIAN VPSQSPVSNP LSLSSHNVNP FEMGNTPTSP GFALLPDEAQ
1301: TSLVEMPPLP PLPPIQWRMG KLQASPDLDG DPTQHYIGAN PSSLASRTDQ DPRPVNQNML SAVATESSEL IDLYSADSVA QSGQYHEVQL PSLHAIERGV
1401: AQPINWIPGV TSLDKPSIDV LGSSEELIQQ QNQVAPELLL EKQGSAHLEG NLPLPVSDGI KPKALPADIV ITDASESLFH EPSQPQHQPL HQLAPETCLD
1501: RSNLEETLTS LEKNVVTRGT VIPSYTENAK PDNSGPTTEA EIIWPAVEEG NTNEIRIVKL QRPRTPLIDD LAAHDKSKLR KVTERVRPET QKVDERDPVL
1601: QLRKVTERAR PEIQKVDEKD SLLQLRKVTE RAMPEIPKVD ERDSLLEQIR KKSFNLKPTV ATRPSIQGPQ TNLRVAAILE KAKTIRQAFA GSDEEDDEDS
1701: WSDS
0101: SFFYNAGTDW HPNLRIDQNM VTRGDLPRFV MDSYEECRGP PRLFLLDKFD VAGAGACLKR YTDPSSFKVE TSSYAFTTSD VQREKKTRKT KKRGSRWRNG
0201: ETPEVLPTSH AKLHQLFLEE RIENGINVPA HRVKLKRKLN GFPFDPRTGK SYMNKFLEIS SPEHKVVHEV GIDSSPLRLP STDACETLAE TEDIRPPSPD
0301: KEVMRRNKRA SLSPSPPQSA ENNSLRPCLD EVNGDLSCYR VRGISRRSHR SQTTDILPSI HSLVDEKEIT VDGESRTEKG IGYESDDVAS EIDNYVDALT
0401: TMEAELETDS EQRDRRDLPF LNSKKQVLCL SSSSEKLQTQ SSDSHSIENS TLSDDGNSYS KKEISSFSCS DSPSTSVESV LLESEISSKG AKTSDTSCEQ
0501: QSVNEETQLP QPPEGGVYDR KCIIVAREPS GSCDSGMRAE TNENFITHGK SEDPLTTIAE DASSLHVSLP HAPVILDAPE QNGDDSPSRA SIDIKLTDGL
0601: VDQNLKLDEN VSCASSHSDV PYHATDNMPE SESPVIQHES NLYNDASLVN NLPITSELLN IPSEDRHEVL SADYQQLPNL DGEDPSVGDD SASLYNLPNC
0701: PSSEEGHTSP SLLAVNHPNH VDNGLDNENL NGSSVGSVQI LDVLGASDTD CGKHFTMSHD EIAEDACMKP HNISTKDIEA GDADKDHEDT CGAFSDGVMS
0801: EPGDLSTNCG GDGLDFVDVL NSQTSEIPND IQSLESGELN ISCSRQENPV EVSSLTKIDE KGSIAPSELL SGTVSTGSIA SRHLKSLTNK GILSDETVNK
0901: IDKSDVTDET ASLLAALADK ENFDDLSSSL DHKLFSEESV CSIGHSSQRE LEIDLSNSHA ESKFMTQRAN TPDSNSFVLD TSNCHHPESA VLDTPSGSEL
1001: SFDAENTMDS SAAPSQALLK KWCLDTEEVL SRRRNVADLT EDASSLQISP EEGKDELVDN QPNEELLHKV DLDQSPLLEK IQSHVDQVSD ASSLSFVANL
1101: PSQDAIPDVL AHNSNLVSEP LLTDYCAEET AESAIHEQVK REVLDSGEAK AEPLPQLTQS QLVDCFDIEQ SAEASSISSQ TVRPSHPSFP ELLSQSNQDS
1201: LSSLYKKDEE IASKVSDTER LIDEDTAKEV LLPQFEEARL SNHVDIVGAL DASSVPFIAN VPSQSPVSNP LSLSSHNVNP FEMGNTPTSP GFALLPDEAQ
1301: TSLVEMPPLP PLPPIQWRMG KLQASPDLDG DPTQHYIGAN PSSLASRTDQ DPRPVNQNML SAVATESSEL IDLYSADSVA QSGQYHEVQL PSLHAIERGV
1401: AQPINWIPGV TSLDKPSIDV LGSSEELIQQ QNQVAPELLL EKQGSAHLEG NLPLPVSDGI KPKALPADIV ITDASESLFH EPSQPQHQPL HQLAPETCLD
1501: RSNLEETLTS LEKNVVTRGT VIPSYTENAK PDNSGPTTEA EIIWPAVEEG NTNEIRIVKL QRPRTPLIDD LAAHDKSKLR KVTERVRPET QKVDERDPVL
1601: QLRKVTERAR PEIQKVDEKD SLLQLRKVTE RAMPEIPKVD ERDSLLEQIR KKSFNLKPTV ATRPSIQGPQ TNLRVAAILE KAKTIRQAFA GSDEEDDEDS
1701: WSDS
0001: MPLTRYQSRN EYGLADPDLY QAADKDDPEA LLEGVAMAGL VGILRQLGDL AEFAAEMFHD LHEEVMATAS RSHGLMARVQ QLEAEFPSIE KALLCQTDHS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
Arabidopsis Description
SCAR2Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.