Factsheet for Solyc03g114070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 2
cytosol 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g111930.2.1
Solyc02g064950.2.1
Solyc02g093140.2.1
Solyc03g113720.2.1
Solyc06g073150.2.1
Solyc08g016050.2.1
Solyc08g016060.1.1
Solyc08g016070.1.1
Solyc09g014980.2.1
Solyc11g017300.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48040.1	Solyc06g073150.2.1	AT1G22920.1	21798944
AT3G48040.1	Solyc11g017300.1.1	AT1G22920.1	21798944
AT3G48040.1	Solyc03g113720.2.1	AT3G48100.1	18642946
AT5G62880.1	Solyc06g073150.2.1	AT1G22920.1	21798944
AT5G62880.1	Solyc11g017300.1.1	AT1G22920.1	21798944
AT5G62880.1	Solyc09g014980.2.1	AT2G38440.1	17267444
AT5G62880.1	Solyc08g016050.2.1	AT4G16340.1	17267444
AT5G62880.1	Solyc08g016060.1.1	AT4G16340.1	17267444
AT5G62880.1	Solyc08g016070.1.1	AT4G16340.1	17267444
AT5G62880.1	Solyc02g064950.2.1	AT4G36910.1	21798944
AT5G62880.1	Solyc02g093140.2.1	AT4G36910.1	21798944
AT5G62880.1	Solyc01g111930.2.1	AT4G38430.1	22500990

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063229	Potato	cytosol	99.52	99.52
VIT_17s0000g07890.t01	Wine grape	cytosol	89.52	89.52
KRH57035	Soybean	cytosol	88.1	88.52
TraesCS6D01G288300.1	Wheat	cytosol	89.52	88.26
TraesCS6A01G309000.2	Wheat	cytosol	89.05	87.79
KRH54429	Soybean	cytosol	27.14	87.69
EES05544	Sorghum	cytosol	89.05	87.38
Os02t0742200-01	Rice	cytosol	88.57	86.92
Bra035878.1-P	Field mustard	cytosol	84.76	86.83
KRH63489	Soybean	cytosol	86.67	85.85
Os06t0234200-03	Rice	cytosol	87.62	85.58
AT5G62880.1	Thale cress	cytosol	87.14	85.12
EER88130	Sorghum	cytosol	87.14	85.12
TraesCS6B01G338000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.19	84.98
CDY56740	Canola	cytosol	87.14	84.72
AT3G48040.1	Thale cress	cytosol	83.81	84.62
Bra010128.1-P	Field mustard	cytosol	83.81	84.62
HORVU6Hr1G076210.5	Barley	cytosol	86.19	84.19
TraesCS7B01G096200.1	Wheat	cytosol	85.24	84.04
PGSC0003DMT400063227	Potato	cytosol	63.81	83.75
CDY30738	Canola	cytosol	85.71	83.72
CDY00332	Canola	cytosol	85.71	83.72
Bra029240.1-P	Field mustard	cytosol	85.71	83.72
TraesCS7D01G192400.1	Wheat	cytosol	84.76	83.57
KRH54430	Soybean	cytosol	58.1	83.56
TraesCS7A01G191400.1	Wheat	cytosol	84.29	83.1
CDY45748	Canola	cytosol	83.81	82.63
CDY68200	Canola	cytosol	70.95	82.32
Solyc02g083580.2.1	Tomato	nucleus	77.14	82.23
Solyc02g062020.2.1	Tomato	plastid	76.19	81.22
Solyc01g111560.2.1	Tomato	cytosol, nucleus, plastid	76.19	80.81
Solyc02g077400.2.1	Tomato	cytosol, plastid	73.81	78.68
Solyc07g020800.2.1	Tomato	cytosol	73.33	73.33
Solyc03g033420.2.1	Tomato	cytosol	68.57	73.1
Zm00001d052273_P004	Maize	plastid	74.29	71.89
KRH03338	Soybean	cytosol, plastid	86.19	71.26
HORVU7Hr1G038980.5	Barley	cytosol	83.81	70.4
Solyc12g007210.1.1	Tomato	cytosol	70.48	70.14
Solyc01g088780.2.1	Tomato	cytosol	69.05	69.71
GSMUA_Achr6P36120_001	Banana	cytosol	87.14	65.83
Zm00001d044802_P001	Maize	cytosol	84.29	61.67
Solyc10g055520.1.1	Tomato	cytosol	42.38	55.97
Zm00001d018004_P002	Maize	cytosol, peroxisome, plastid	87.62	36.36

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
InterPro:IPR003578	UniProt:K4BKQ9	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420
PANTHER:PTHR24072	PANTHER:PTHR24072:SF149	SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	EnsemblPlantsGene:Solyc03g114070.2	EnsemblPlants:Solyc03g114070.2.1	TIGRFAMs:TIGR00231
UniParc:UPI00000AE3B2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:-:64110442..64118342

Molecular Weight (calculated)

23294.4 Da

IEP (calculated)

9.534

GRAVY (calculated)

-0.125

Length

210 amino acids

Sequence
(BLAST)

001: MASSASRFIK CVTVGDGAVG KTCMLICYTS NKFPTDYVPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLV SRASYENILK
101: KWIPELQHYA PGIPVVLAGT KLDLREDKHF LADHPGLVPV TTAQGEELRK QIGAAYYIEC SSKTQQNVKA VFDAAIKVVI KPPQKQKEKK KQRRGCLMNV
201: MCGRKLVCLK

Best Arabidopsis Sequence Match ( AT5G62880.1 )
(BLAST)

001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLSFSLV SRASYENVFK
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQNVKA VFDSAIKEVI KPLVKQKEKT KKKKKQKSNH
201: GCLSNVLCGR IVTRH

Arabidopsis Description

ARAC10ROP11 [Source:UniProtKB/TrEMBL;Acc:A0A178UC00]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.