Factsheet for Solyc07g020800.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400022302	Potato	cytosol	97.62	97.62
VIT_11s0016g03640.t01	Wine grape	cytosol, nucleus, plasma membrane	93.33	93.33
KRH39320	Soybean	cytosol	90.48	89.62
KRH48356	Soybean	cytosol	89.52	89.52
Solyc12g007210.1.1	Tomato	cytosol	89.52	89.1
AT4G28950.1	Thale cress	cytosol	88.1	88.52
GSMUA_Achr6P26750_001	Banana	cytosol	87.62	87.62
GSMUA_Achr9P06320_001	Banana	cytosol	86.67	86.67
Bra011072.1-P	Field mustard	cytosol	86.19	86.6
CDY35236	Canola	cytosol	86.19	86.6
CDY06854	Canola	cytosol	86.19	86.6
TraesCS1D01G336200.1	Wheat	cytosol	84.76	83.96
TraesCS1B01G347000.1	Wheat	cytosol	84.76	83.96
TraesCS1A01G333600.1	Wheat	cytosol	84.76	83.96
GSMUA_Achr8P27380_001	Banana	cytosol	82.86	83.25
Os05t0513800-01	Rice	plasma membrane	84.76	83.18
EES18497	Sorghum	cytosol	83.33	82.55
Zm00001d010732_P002	Maize	plasma membrane	82.86	82.08
HORVU1Hr1G076880.4	Barley	cytosol	84.29	81.19
Zm00001d038688_P002	Maize	cytosol	83.81	81.11
Os01t0229400-02	Rice	endoplasmic reticulum, plasma membrane	80.0	78.5
Solyc02g083580.2.1	Tomato	nucleus	72.86	77.67
EES19253	Sorghum	cytosol	79.52	77.31
Solyc01g111560.2.1	Tomato	cytosol, nucleus, plastid	72.86	77.27
Solyc02g077400.2.1	Tomato	cytosol, plastid	71.43	76.14
Solyc02g062020.2.1	Tomato	plastid	70.95	75.63
TraesCS3D01G161900.1	Wheat	cytosol	77.14	74.31
Os01t0540300-00	Rice	cytosol	31.43	74.16
TraesCS3A01G154600.1	Wheat	cytosol	77.14	73.64
Solyc03g114070.2.1	Tomato	cytosol	73.33	73.33
TraesCS3B01G180900.1	Wheat	cytosol	76.67	72.52
Zm00001d037911_P008	Maize	cytosol	78.57	70.51
Solyc01g088780.2.1	Tomato	cytosol	68.57	69.23
Solyc03g033420.2.1	Tomato	cytosol	62.38	66.5
Solyc10g055520.1.1	Tomato	cytosol	40.95	54.09
HORVU3Hr1G052560.3	Barley	cytosol	52.38	37.04

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
InterPro:IPR003578	UniProt:K4CCU0	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420
PANTHER:PTHR24072	PANTHER:PTHR24072:SF127	SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	EnsemblPlantsGene:Solyc07g020800.2	EnsemblPlants:Solyc07g020800.2.1	TIGRFAMs:TIGR00231
UniParc:UPI000276C5C7	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:-:13554611..13557326

Molecular Weight (calculated)

23147.1 Da

IEP (calculated)

9.447

GRAVY (calculated)

-0.056

Length

210 amino acids

Sequence
(BLAST)

001: MNASKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYVPTVF DNFSANVAVD GSIVNLGLWD TAGQEDYSRL RPLSYRGADI FVLAFSLISS ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DIREDNRYLA DHMGSNIITP AQGEELRRQI GAAAYIECSS KTQQNVKAVF DTAIKVVLQP PRRKEVVRKK RQRSTGCSIV
201: RGIVCGGCVA

Best Arabidopsis Sequence Match ( AT4G28950.1 )
(BLAST)

001: MSASKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVAVD GQIVNLGLWD TAGQEDYSRL RPLSYRGADI FVLAFSLISK ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DLRDDKGYLA DHTNVITSTQ GEELRKQIGA AAYIECSSKT QQNVKAVFDT AIKVVLQPPR RKEVPRRRKN HRRSGCSIAS
201: IVCGGCTAA

Arabidopsis Description

ARAC7Rac-like GTP-binding protein ARAC7 [Source:UniProtKB/Swiss-Prot;Acc:O82480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.