Factsheet for HORVU1Hr1G076880.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G336200.1	Wheat	cytosol	95.41	98.11
TraesCS1B01G347000.1	Wheat	cytosol	95.41	98.11
TraesCS1A01G333600.1	Wheat	cytosol	95.41	98.11
EES18497	Sorghum	cytosol	90.83	93.4
Zm00001d010732_P002	Maize	plasma membrane	88.07	90.57
Os05t0513800-01	Rice	plasma membrane	88.53	90.19
Zm00001d038688_P002	Maize	cytosol	89.45	89.86
GSMUA_Achr6P26750_001	Banana	cytosol	83.94	87.14
VIT_11s0016g03640.t01	Wine grape	cytosol, nucleus, plasma membrane	83.49	86.67
GSMUA_Achr9P06320_001	Banana	cytosol	83.03	86.19
AT4G28950.1	Thale cress	cytosol	81.65	85.17
Solyc12g007210.1.1	Tomato	cytosol	82.11	84.83
Bra011072.1-P	Field mustard	cytosol	81.19	84.69
CDY35236	Canola	cytosol	81.19	84.69
CDY06854	Canola	cytosol	81.19	84.69
PGSC0003DMT400000816	Potato	cytosol	81.65	84.36
Solyc07g020800.2.1	Tomato	cytosol	81.19	84.29
PGSC0003DMT400022302	Potato	cytosol	80.28	83.33
GSMUA_Achr8P27380_001	Banana	cytosol	79.36	82.78
HORVU6Hr1G095230.1	Barley	cytosol	70.18	77.67
HORVU6Hr1G076210.5	Barley	cytosol	70.64	71.63
KRG90165	Soybean	cytosol	37.16	67.5
HORVU7Hr1G038980.5	Barley	cytosol	67.89	59.2
HORVU6Hr1G012690.3	Barley	plastid	69.27	53.36
HORVU2Hr1G076740.1	Barley	cytosol	15.6	53.12
HORVU3Hr1G050740.1	Barley	cytosol	31.19	52.71
HORVU3Hr1G050750.1	Barley	cytosol, plasma membrane, plastid	18.81	45.05
HORVU3Hr1G052560.3	Barley	cytosol	50.46	37.04

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	UniProt:A0A287GBJ0	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
EnsemblPlantsGene:HORVU1Hr1G076880	EnsemblPlants:HORVU1Hr1G076880.4	InterPro:IPR003578	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF127	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231
UniParc:UPI000B4636F3	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:515943619..515945121

Molecular Weight (calculated)

23718.5 Da

IEP (calculated)

9.447

GRAVY (calculated)

-0.113

Length

218 amino acids

Sequence
(BLAST)

001: GGGGGEMSVT KFIKCVTVGD GAVGKTCMLI CYTSNRFPSD YIPTVFDNFS ANVSVDGNIV NLGLWDTSGQ EDYSRLRPLS YRGADVFVLA FSLISSASYE
101: NVLKKWMPEL RRFAPNVPIV LVGTKLDLRD HRAYLADHPG ASAITTAQGE ELRKQIGAAA YIECSSKTQQ NVKAVFDTAI KVVLQPPRRR EVMSARKKTR
201: RSSGCSIKHL ICGSTCAA

Best Arabidopsis Sequence Match ( AT4G28950.1 )
(BLAST)

001: MSASKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVAVD GQIVNLGLWD TAGQEDYSRL RPLSYRGADI FVLAFSLISK ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DLRDDKGYLA DHTNVITSTQ GEELRKQIGA AAYIECSSKT QQNVKAVFDT AIKVVLQPPR RKEVPRRRKN HRRSGCSIAS
201: IVCGGCTAA

Arabidopsis Description

ARAC7Rac-like GTP-binding protein ARAC7 [Source:UniProtKB/Swiss-Prot;Acc:O82480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.