Factsheet for Zm00001d010732_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

plasma membrane: 11029706
cytosol: 19201915
plasma membrane: 22706447

plastid: 23198870

gfp PMID: 19201915 doi

A Mohanty, A Luo, S DeBlasio, X Ling, Y Yang, DE Tuthill, KE Williams, D Hill, T Zadrozny, A Chan, AW Sylvester, D Jackson

Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.

gfp PMID: 22706447 doi

DR Kirienko, A Luo, AW Sylvester

Department of Molecular Biology, University of Wyoming, Laramie, Wyoming 82071, USA.

gfp PMID: 11029706

M Ivanchenko, Z Vejlupkova, RS Quatrano, JE Fowler

Center for Gene Research and Biotechnology, Department of Botany, Oregon State University, Corvallis, OR 97331, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18497	Sorghum	cytosol	97.17	97.17
Zm00001d038688_P002	Maize	cytosol	96.7	94.47
TraesCS1B01G347000.1	Wheat	cytosol	91.98	91.98
TraesCS1A01G333600.1	Wheat	cytosol	91.98	91.98
TraesCS1D01G336200.1	Wheat	cytosol	91.98	91.98
Os05t0513800-01	Rice	plasma membrane	89.15	88.32
HORVU1Hr1G076880.4	Barley	cytosol	90.57	88.07
GSMUA_Achr6P26750_001	Banana	cytosol	86.32	87.14
GSMUA_Achr9P06320_001	Banana	cytosol	84.91	85.71
VIT_11s0016g03640.t01	Wine grape	cytosol, nucleus, plasma membrane	84.43	85.24
GSMUA_Achr8P27380_001	Banana	cytosol	83.96	85.17
AT4G28950.1	Thale cress	cytosol	83.49	84.69
CDY35236	Canola	cytosol	82.55	83.73
Bra011072.1-P	Field mustard	cytosol	82.55	83.73
Solyc12g007210.1.1	Tomato	cytosol	83.02	83.41
CDY06854	Canola	cytosol	82.08	83.25
Solyc07g020800.2.1	Tomato	cytosol	82.08	82.86
PGSC0003DMT400000816	Potato	cytosol	82.08	82.46
PGSC0003DMT400022302	Potato	cytosol	81.13	81.9
Zm00001d018573_P002	Maize	mitochondrion	73.11	78.68
Zm00001d015036_P005	Maize	cytosol	71.23	76.65
Zm00001d037911_P008	Maize	cytosol	82.08	74.36
KRG90165	Soybean	cytosol	35.38	62.5
Zm00001d053899_P001	Maize	cytosol	67.45	61.64
Zm00001d052273_P004	Maize	plastid	62.26	60.83
Zm00001d044802_P001	Maize	cytosol	74.06	54.7
Zm00001d018004_P002	Maize	cytosol, peroxisome, plastid	74.53	31.23

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EntrezGene:542503	ProteinID:AAO41293.1	EMBL:AJ278664	ProteinID:AQK94764.1
EMBL:BT034321	EMBL:EU962807	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
InterPro:IPR003578	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072
PANTHER:PTHR24072:SF127	UniProt:Q9LEC6	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI000000542D
EnsemblPlantsGene:Zm00001d010732	EnsemblPlants:Zm00001d010732_P002	EnsemblPlants:Zm00001d010732_T002	SEG:seg	:	:

Description

Rho-related protein from plants 7 Rho-related protein from plants 7

Coordinates

chr8:+:126282952..126285155

Molecular Weight (calculated)

23306.1 Da

IEP (calculated)

9.463

GRAVY (calculated)

-0.125

Length

212 amino acids

Sequence
(BLAST)

001: MSVTKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVSVD GSIVNLGLWD TAGQEDYSRL RPLSYRGADV FVLAFSLISR ASYENVLKKW
101: VPELRRFAPD VPVVLVGTKL DLRDHRAYLA DHPGASTITT AQGEELRRQI GAAAYIECSS KTQQNVKSVF DTAIKVVLQP PRRREATPAR RKNRRGSGCS
201: IMNLMCGSTC AA

Best Arabidopsis Sequence Match ( AT4G28950.1 )
(BLAST)

001: MSASKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVAVD GQIVNLGLWD TAGQEDYSRL RPLSYRGADI FVLAFSLISK ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DLRDDKGYLA DHTNVITSTQ GEELRKQIGA AAYIECSSKT QQNVKAVFDT AIKVVLQPPR RKEVPRRRKN HRRSGCSIAS
201: IVCGGCTAA

Arabidopsis Description

ARAC7Rac-like GTP-binding protein ARAC7 [Source:UniProtKB/Swiss-Prot;Acc:O82480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.