Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G288300.1 | Wheat | cytosol | 77.88 | 79.34 |
| TraesCS6A01G309000.2 | Wheat | cytosol | 77.88 | 79.34 |
| TraesCS6B01G338000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 77.42 | 78.87 |
| Os02t0742200-01 | Rice | cytosol | 76.96 | 78.04 |
| KRH54430 | Soybean | cytosol | 51.61 | 76.71 |
| HORVU6Hr1G076210.5 | Barley | cytosol | 73.73 | 74.42 |
| Solyc03g114070.2.1 | Tomato | cytosol | 71.89 | 74.29 |
| PGSC0003DMT400063229 | Potato | cytosol | 71.43 | 73.81 |
| GSMUA_Achr3P06090_001 | Banana | cytosol, mitochondrion, plastid | 71.43 | 72.43 |
| VIT_17s0000g07890.t01 | Wine grape | cytosol | 69.59 | 71.9 |
| AT3G48040.1 | Thale cress | cytosol | 68.2 | 71.15 |
| KRH57035 | Soybean | cytosol | 68.2 | 70.81 |
| Zm00001d015036_P005 | Maize | cytosol | 63.59 | 70.05 |
| GSMUA_Achr2P00650_001 | Banana | cytosol | 68.66 | 69.95 |
| Bra035878.1-P | Field mustard | cytosol | 65.9 | 69.76 |
| CDY45748 | Canola | cytosol | 67.74 | 69.01 |
| KRH63489 | Soybean | cytosol | 67.28 | 68.87 |
| AT5G62880.1 | Thale cress | cytosol | 68.2 | 68.84 |
| Zm00001d018573_P002 | Maize | mitochondrion | 62.21 | 68.53 |
| CDY68200 | Canola | cytosol | 57.14 | 68.51 |
| CDY30738 | Canola | cytosol | 67.74 | 68.37 |
| Bra029240.1-P | Field mustard | cytosol | 67.74 | 68.37 |
| CDY56740 | Canola | cytosol | 67.74 | 68.06 |
| CDY00332 | Canola | cytosol | 67.28 | 67.91 |
| Bra010128.1-P | Field mustard | cytosol | 64.98 | 67.79 |
| Zm00001d010732_P002 | Maize | plasma membrane | 60.83 | 62.26 |
| Zm00001d038688_P002 | Maize | cytosol | 61.29 | 61.29 |
| PGSC0003DMT400063227 | Potato | cytosol | 44.7 | 60.62 |
| KRH03338 | Soybean | cytosol, plastid | 68.66 | 58.66 |
| Zm00001d053899_P001 | Maize | cytosol | 60.37 | 56.47 |
| Zm00001d037911_P008 | Maize | cytosol | 60.37 | 55.98 |
| Zm00001d044802_P001 | Maize | cytosol | 69.12 | 52.26 |
| KRH54429 | Soybean | cytosol | 14.75 | 49.23 |
| Zm00001d018004_P002 | Maize | cytosol, peroxisome, plastid | 76.96 | 33.0 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:541930 | UniProt:A0A1D6QEQ7 | ProteinID:AQK56603.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | InterPro:IPR003578 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 | PANTHER:PTHR24072:SF149 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | InterPro:Small_GTPase_Rho | TIGRFAMs:TIGR00231 |
| UniParc:UPI0008435BB7 | EnsemblPlantsGene:Zm00001d052273 | EnsemblPlants:Zm00001d052273_P004 | EnsemblPlants:Zm00001d052273_T004 | SEG:seg | : |
Description
Rho-related protein from plants 8 Rho-related protein from plants 8
Coordinates
chr4:+:185525602..185529100
Molecular Weight (calculated)
24298.0 Da
IEP (calculated)
10.333
GRAVY (calculated)
-0.099
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSASRFIK CVTVGDGAVG KTCMLICYTS NKFPTVSSSF LYLIPVPIGK KVAVRFPVNL GDFITSNGQE DYNRLRPLSY RGADVFVLAF SLVSRASYEN
101: IMKKWIPELQ HYARGVPVVL VGTKFDLRED KHYLMDHPGL VPVTTAQGEE LRRQIGAMYY IECSSKTQQN VKAVFDAAIK VVIQPPTKLR EKKKKKSRKG
201: CSMVNILSGR KMLCFKS
101: IMKKWIPELQ HYARGVPVVL VGTKFDLRED KHYLMDHPGL VPVTTAQGEE LRRQIGAMYY IECSSKTQQN VKAVFDAAIK VVIQPPTKLR EKKKKKSRKG
201: CSMVNILSGR KMLCFKS
001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSVNVV VEGITVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLI SRASYENVFK
101: KWIPELQHFA PGVPIVLVGT KMDLREDRHY LSDHPGLSPV TTSQGEELRK HIGATYYIEC SSKTQQNVKA VFDAAIKVVI KPAVKQKEKK KKQKPRSGCL
201: SNILCGKN
101: KWIPELQHFA PGVPIVLVGT KMDLREDRHY LSDHPGLSPV TTSQGEELRK HIGATYYIEC SSKTQQNVKA VFDAAIKVVI KPAVKQKEKK KKQKPRSGCL
201: SNILCGKN
Arabidopsis Description
ARAC8ROP10 [Source:UniProtKB/TrEMBL;Acc:A0A178VHB5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.