Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 2
- cytosol 3
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g114070.2.1 | Tomato | cytosol | 99.52 | 99.52 |
| VIT_17s0000g07890.t01 | Wine grape | cytosol | 89.05 | 89.05 |
| KRH57035 | Soybean | cytosol | 88.1 | 88.52 |
| TraesCS6D01G288300.1 | Wheat | cytosol | 89.05 | 87.79 |
| KRH54429 | Soybean | cytosol | 27.14 | 87.69 |
| Os02t0742200-01 | Rice | cytosol | 89.05 | 87.38 |
| TraesCS6A01G309000.2 | Wheat | cytosol | 88.57 | 87.32 |
| EES05544 | Sorghum | cytosol | 88.57 | 86.92 |
| Bra035878.1-P | Field mustard | cytosol | 84.29 | 86.34 |
| KRH63489 | Soybean | cytosol | 86.19 | 85.38 |
| Os06t0234200-03 | Rice | cytosol | 87.14 | 85.12 |
| AT5G62880.1 | Thale cress | cytosol | 86.67 | 84.65 |
| EER88130 | Sorghum | cytosol | 86.67 | 84.65 |
| TraesCS6B01G338000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 85.71 | 84.51 |
| CDY56740 | Canola | cytosol | 86.67 | 84.26 |
| AT3G48040.1 | Thale cress | cytosol | 83.33 | 84.13 |
| Bra010128.1-P | Field mustard | cytosol | 83.33 | 84.13 |
| PGSC0003DMT400063227 | Potato | cytosol | 63.81 | 83.75 |
| HORVU6Hr1G076210.5 | Barley | cytosol | 85.71 | 83.72 |
| TraesCS7B01G096200.1 | Wheat | cytosol | 84.76 | 83.57 |
| CDY30738 | Canola | cytosol | 85.24 | 83.26 |
| CDY00332 | Canola | cytosol | 85.24 | 83.26 |
| Bra029240.1-P | Field mustard | cytosol | 85.24 | 83.26 |
| TraesCS7D01G192400.1 | Wheat | cytosol | 84.29 | 83.1 |
| KRH54430 | Soybean | cytosol | 57.62 | 82.88 |
| TraesCS7A01G191400.1 | Wheat | cytosol | 83.81 | 82.63 |
| CDY45748 | Canola | cytosol | 83.33 | 82.16 |
| CDY68200 | Canola | cytosol | 70.48 | 81.77 |
| PGSC0003DMT400031185 | Potato | cytosol | 40.48 | 81.73 |
| PGSC0003DMT400009227 | Potato | cytosol | 76.67 | 81.73 |
| PGSC0003DMT400061371 | Potato | cytosol | 76.67 | 81.73 |
| PGSC0003DMT400058108 | Potato | cytosol | 75.71 | 80.71 |
| PGSC0003DMT400015836 | Potato | cytosol, nucleus, plastid | 75.71 | 80.3 |
| PGSC0003DMT400027852 | Potato | cytosol | 73.33 | 78.17 |
| PGSC0003DMT400022302 | Potato | cytosol | 73.81 | 73.81 |
| Zm00001d052273_P004 | Maize | plastid | 73.81 | 71.43 |
| KRH03338 | Soybean | cytosol, plastid | 86.19 | 71.26 |
| PGSC0003DMT400000816 | Potato | cytosol | 70.95 | 70.62 |
| HORVU7Hr1G038980.5 | Barley | cytosol | 83.33 | 70.0 |
| PGSC0003DMT400004254 | Potato | cytosol | 68.1 | 68.75 |
| PGSC0003DMT400031188 | Potato | cytosol | 26.67 | 68.29 |
| GSMUA_Achr6P36120_001 | Banana | cytosol | 86.67 | 65.47 |
| Zm00001d044802_P001 | Maize | cytosol | 83.81 | 61.32 |
| Zm00001d018004_P002 | Maize | cytosol, peroxisome, plastid | 87.14 | 36.17 |
Protein Annotations
| EntrezGene:102588549 | MapMan:27.4.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016787 | InterPro:IPR003578 | UniProt:M1CAA2 | InterPro:P-loop_NTPase | PFAM:PF00071 | EnsemblPlantsGene:PGSC0003DMG402024590 |
| PGSC:PGSC0003DMG402024590 | EnsemblPlants:PGSC0003DMT400063229 | PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 | PANTHER:PTHR24072:SF149 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| InterPro:Small_GTPase_Rho | TIGRFAMs:TIGR00231 | UniParc:UPI000296BB78 | RefSeq:XP_006345032.1 | RefSeq:XP_006345033.1 | SEG:seg |
Description
Rac protein [Source:PGSC_GENE;Acc:PGSC0003DMG402024590]
Coordinates
chr3:-:53936158..53944679
Molecular Weight (calculated)
23280.4 Da
IEP (calculated)
9.534
GRAVY (calculated)
-0.136
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSASRFIK CVTVGDGAVG KTCMLICYTS NKFPTDYVPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLV SRASYENILK
101: KWIPELQHYA PGIPVVLAGT KLDLREDKHF LADHPGLVPV TTAQGEELRK QIGAAYYIEC SSKTQQNVKG VFDAAIKVVI KPPQKQKEKK KQRRGCLMNV
201: MCGRKLVCLK
101: KWIPELQHYA PGIPVVLAGT KLDLREDKHF LADHPGLVPV TTAQGEELRK QIGAAYYIEC SSKTQQNVKG VFDAAIKVVI KPPQKQKEKK KQRRGCLMNV
201: MCGRKLVCLK
001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLSFSLV SRASYENVFK
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQNVKA VFDSAIKEVI KPLVKQKEKT KKKKKQKSNH
201: GCLSNVLCGR IVTRH
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQNVKA VFDSAIKEVI KPLVKQKEKT KKKKKQKSNH
201: GCLSNVLCGR IVTRH
Arabidopsis Description
ARAC10ROP11 [Source:UniProtKB/TrEMBL;Acc:A0A178UC00]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.