Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 2
- cytosol 3
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G288300.1 | Wheat | cytosol | 94.86 | 95.31 |
| TraesCS6A01G309000.2 | Wheat | cytosol | 94.39 | 94.84 |
| EES05544 | Sorghum | cytosol | 92.99 | 92.99 |
| TraesCS6B01G338000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 91.59 | 92.02 |
| HORVU6Hr1G076210.5 | Barley | cytosol | 90.19 | 89.77 |
| PGSC0003DMT400063229 | Potato | cytosol | 87.38 | 89.05 |
| Solyc03g114070.2.1 | Tomato | cytosol | 86.92 | 88.57 |
| Os06t0234200-03 | Rice | cytosol | 87.38 | 86.98 |
| VIT_17s0000g07890.t01 | Wine grape | cytosol | 84.58 | 86.19 |
| KRH54429 | Soybean | cytosol | 26.17 | 86.15 |
| GSMUA_Achr3P06090_001 | Banana | cytosol, mitochondrion, plastid | 85.98 | 85.98 |
| Bra035878.1-P | Field mustard | cytosol | 80.84 | 84.39 |
| KRH57035 | Soybean | cytosol | 82.24 | 84.21 |
| Os02t0120800-01 | Rice | plasma membrane | 77.1 | 83.76 |
| AT3G48040.1 | Thale cress | cytosol | 81.31 | 83.65 |
| AT5G62880.1 | Thale cress | cytosol | 83.18 | 82.79 |
| Os02t0834000-01 | Rice | cytosol | 76.17 | 82.74 |
| Bra010128.1-P | Field mustard | cytosol | 80.37 | 82.69 |
| CDY30738 | Canola | cytosol | 82.24 | 81.86 |
| Bra029240.1-P | Field mustard | cytosol | 82.24 | 81.86 |
| CDY56740 | Canola | cytosol | 82.24 | 81.48 |
| CDY00332 | Canola | cytosol | 81.78 | 81.4 |
| GSMUA_Achr2P00650_001 | Banana | cytosol | 80.84 | 81.22 |
| CDY45748 | Canola | cytosol | 80.37 | 80.75 |
| KRH63489 | Soybean | cytosol | 79.91 | 80.66 |
| Os02t0312600-01 | Rice | cytosol | 73.83 | 80.2 |
| PGSC0003DMT400063227 | Potato | cytosol | 59.35 | 79.38 |
| CDY68200 | Canola | cytosol | 66.36 | 78.45 |
| Zm00001d052273_P004 | Maize | plastid | 78.04 | 76.96 |
| KRH54430 | Soybean | cytosol | 52.34 | 76.71 |
| Os05t0513800-01 | Rice | plasma membrane | 73.83 | 73.83 |
| Os01t0540300-00 | Rice | cytosol | 29.91 | 71.91 |
| Os01t0229400-02 | Rice | endoplasmic reticulum, plasma membrane | 71.5 | 71.5 |
| KRH03338 | Soybean | cytosol, plastid | 82.71 | 69.69 |
| Os11t0303400-02 | Rice | cytosol | 22.43 | 41.74 |
| Zm00001d018004_P002 | Maize | cytosol, peroxisome, plastid | 89.72 | 37.94 |
Protein Annotations
| MapMan:27.4.1 | Gene3D:3.40.50.300 | EntrezGene:4330693 | EMBL:AB029510 | ProteinID:BAD15735.1 | ProteinID:BAF10002.1 |
| ProteinID:BAS80863.1 | ProteinID:EEE57791.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016787 | InterPro:IPR003578 | EnsemblPlantsGene:Os02g0742200 | EnsemblPlants:Os02t0742200-01 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 | PANTHER:PTHR24072:SF174 | UniProt:Q6Z808 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| InterPro:Small_GTPase_Rho | TIGRFAMs:TIGR00231 | UniParc:UPI00000A1E86 | RefSeq:XP_015625155.1 | SEG:seg | : |
Description
RAC/ROP-TYPE GTPASE 3Small GTP-binding protein OsRac3. (Os02t0742200-01);Small GTP-binding protein OsRac3. (Os02t0742200-02)
Coordinates
chr2:-:31084468..31088184
Molecular Weight (calculated)
23968.1 Da
IEP (calculated)
9.754
GRAVY (calculated)
-0.248
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSASRFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VDSTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLV SRASYENIMK
101: KWIPELQHYA PGVPIVLVGT KLDLREDKHY LLDHPGMIPV TTAQGEELRK QIGAAYYIEC SSKTQQNVKG VFDAAIKVVI QPPTKQREKK KKKSRQGCSM
201: MNMFRGRKMS CFKS
101: KWIPELQHYA PGVPIVLVGT KLDLREDKHY LLDHPGMIPV TTAQGEELRK QIGAAYYIEC SSKTQQNVKG VFDAAIKVVI QPPTKQREKK KKKSRQGCSM
201: MNMFRGRKMS CFKS
001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLSFSLV SRASYENVFK
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQNVKA VFDSAIKEVI KPLVKQKEKT KKKKKQKSNH
201: GCLSNVLCGR IVTRH
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQNVKA VFDSAIKEVI KPLVKQKEKT KKKKKQKSNH
201: GCLSNVLCGR IVTRH
Arabidopsis Description
ARAC10ROP11 [Source:UniProtKB/TrEMBL;Acc:A0A178UC00]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.