Factsheet for Os09t0115500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0742200-01
Os04t0654700-02
Os06t0234200-03

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36910.1	Os04t0654700-02	AT1G22920.1	21798944
AT4G36910.1	Os02t0742200-01	AT3G48040.1	21798944
AT4G36910.1	Os06t0234200-03	AT3G48040.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P05420_001	Banana	cytosol	51.1	74.36
KXG25872	Sorghum	plastid	69.6	69.3
GSMUA_Achr1P26070_001	Banana	cytosol	46.7	67.09
TraesCS5B01G159500.1	Wheat	plastid	67.84	65.81
TraesCS5A01G162000.1	Wheat	plastid	68.28	65.68
TraesCS5D01G166900.1	Wheat	plastid	66.52	64.81
Os08t0313200-01	Rice	plasma membrane, plastid	63.44	61.28
Zm00001d004354_P001	Maize	plastid	66.08	59.29
Bra011743.1-P	Field mustard	cytosol	13.66	57.41
CDX75630	Canola	cytosol	13.66	57.41
KRH77032	Soybean	plastid	56.39	56.14
GSMUA_Achr1P15910_001	Banana	plastid	55.95	55.46
KRH28440	Soybean	plastid	55.07	54.82
VIT_07s0031g00200.t01	Wine grape	plastid	59.03	54.47
HORVU5Hr1G050570.1	Barley	plastid	64.76	54.44
Solyc02g093140.2.1	Tomato	plastid	55.95	54.27
PGSC0003DMT400010303	Potato	plastid	55.51	53.85
AT4G36910.1	Thale cress	plastid	55.95	53.81
CDY29539	Canola	plastid	54.63	53.22
Bra017810.1-P	Field mustard	plastid	54.63	53.22
CDY62227	Canola	plastid	54.19	52.79
Solyc02g064950.2.1	Tomato	plastid	54.63	52.54
PGSC0003DMT400065493	Potato	plastid	54.19	52.12

Protein Annotations

EMBL:AK061717	EMBL:AK065986	EnsemblPlants:Os09t0115500-01	EnsemblPlantsGene:Os09g0115500	EntrezGene:4346410	Gene3D:3.10.580.10
InterPro:CBS_dom	InterPro:IPR000644	PANTHER:PTHR43803	PANTHER:PTHR43803:SF1	PFAM:PF00571	PFscan:PS51371
ProteinID:BAD16230.1	ProteinID:BAF24498.1	ProteinID:BAT06853.1	ProteinID:EEE69199.1	RefSeq:XP_015612674.1	SEG:seg
SMART:SM00116	SUPFAM:SSF54631	UniParc:UPI0000358CD2	UniProt:Q6YYV0	MapMan:35.1	:

Description

cystathionine b-synthase domain containing protein OsCBSX2, CBS domain containing protein OsCBSX2Proteinase inhibitor I3, Kunitz legume domain containing protein. (Os09t0115500-01);Proteinase inhibitor I3, Kunitz legume domain containing protein. (Os09t0115500-02)

Coordinates

chr9:-:1221177..1224778

Molecular Weight (calculated)

24169.1 Da

IEP (calculated)

9.686

GRAVY (calculated)

-0.058

Length

227 amino acids

Sequence
(BLAST)

001: MDATLLRSAD AAVAVRSTTT APPPRPRLHR PSTLPLPSSC ACGPLRAYAA PAAPAPAAHN NGVYTVGDFM TKRPNLHVVT PATSVDEALE TLVQHKISGF
101: PVVDDTGKLV GVVSDYDLLA LDSISGSGLT GTNTSMFPEV DSTWKTFREI QRLLSKTNGK VIADVMTYSP LAVRESTNLD AATRLLLETK YRRLPVVDST
201: GKLVGMITRG TVVRAALKIK KTAEETA

Best Arabidopsis Sequence Match ( AT4G36910.1 )
(BLAST)

001: MDAVLYSVPL SFTPLRASSS PSSPYLLLPR FLSVQPCHKF TFSRSFPSKS RIPSASSAAG STLMTNSSSP RSGVYTVGEF MTKKEDLHVV KPTTTVDEAL
101: ELLVENRITG FPVIDEDWKL VGLVSDYDLL ALDSISGSGR TENSMFPEVD STWKTFNAVQ KLLSKTNGKL VGDLMTPAPL VVEEKTNLED AAKILLETKY
201: RRLPVVDSDG KLVGIITRGN VVRAALQIKR SGDRNA

Arabidopsis Description

CBSX1CBS domain-containing protein CBSX1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23193]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.