Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017810.1-P | Field mustard | plastid | 83.9 | 84.98 |
| CDY62227 | Canola | plastid | 83.9 | 84.98 |
| CDY29539 | Canola | plastid | 83.47 | 84.55 |
| GSMUA_Achr7P05420_001 | Banana | cytosol | 53.39 | 80.77 |
| Bra011743.1-P | Field mustard | cytosol | 17.37 | 75.93 |
| CDX75630 | Canola | cytosol | 17.37 | 75.93 |
| GSMUA_Achr1P26070_001 | Banana | cytosol | 49.58 | 74.05 |
| KRH77032 | Soybean | plastid | 63.14 | 65.35 |
| KRH28440 | Soybean | plastid | 62.71 | 64.91 |
| GSMUA_Achr1P15910_001 | Banana | plastid | 61.86 | 63.76 |
| Solyc02g064950.2.1 | Tomato | plastid | 63.56 | 63.56 |
| PGSC0003DMT400065493 | Potato | plastid | 63.56 | 63.56 |
| VIT_07s0031g00200.t01 | Wine grape | plastid | 65.25 | 62.6 |
| PGSC0003DMT400010303 | Potato | plastid | 61.44 | 61.97 |
| Solyc02g093140.2.1 | Tomato | plastid | 61.02 | 61.54 |
| Os08t0313200-01 | Rice | plasma membrane, plastid | 57.63 | 57.87 |
| TraesCS7D01G288400.1 | Wheat | plastid | 55.51 | 56.96 |
| Zm00001d050130_P003 | Maize | plastid | 55.08 | 56.03 |
| Os09t0115500-01 | Rice | plastid | 53.81 | 55.95 |
| TraesCS7A01G295300.1 | Wheat | plastid | 53.81 | 55.22 |
| TraesCS5B01G159500.1 | Wheat | plastid | 54.66 | 55.13 |
| TraesCS5A01G162000.1 | Wheat | plastid | 53.81 | 53.81 |
| TraesCS5D01G166900.1 | Wheat | plastid | 52.97 | 53.65 |
| KXG25872 | Sorghum | plastid | 50.42 | 52.19 |
| AT4G34120.1 | Thale cress | plastid | 50.42 | 50.0 |
| HORVU5Hr1G050570.1 | Barley | plastid | 57.2 | 50.0 |
| Zm00001d004354_P001 | Maize | plastid | 50.85 | 47.43 |
Protein Annotations
| Gene3D:3.10.580.10 | MapMan:35.1 | PDB:4GQV | PDB:4GQW | EntrezGene:829844 | ProteinID:AEE86716.1 |
| ArrayExpress:AT4G36910 | EnsemblPlantsGene:AT4G36910 | RefSeq:AT4G36910 | TAIR:AT4G36910 | RefSeq:AT4G36910-TAIR-G | EnsemblPlants:AT4G36910.1 |
| TAIR:AT4G36910.1 | EMBL:AY085164 | EMBL:BT003835 | EMBL:BT005190 | ProteinID:CAB16799.1 | ProteinID:CAB80357.1 |
| InterPro:CBS_dom | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR000644 |
| Symbol:LEJ2 | RefSeq:NP_195409.1 | UniProt:O23193 | PFAM:PF00571 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009066 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS51371 | PANTHER:PTHR43803 | PANTHER:PTHR43803:SF1 | SMART:SM00116 | SUPFAM:SSF54631 | UniParc:UPI000000C191 |
| SEG:seg | : | : | : | : | : |
Description
CBSX1CBS domain-containing protein CBSX1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23193]
Coordinates
chr4:-:17390626..17393479
Molecular Weight (calculated)
25769.9 Da
IEP (calculated)
8.966
GRAVY (calculated)
-0.123
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAVLYSVPL SFTPLRASSS PSSPYLLLPR FLSVQPCHKF TFSRSFPSKS RIPSASSAAG STLMTNSSSP RSGVYTVGEF MTKKEDLHVV KPTTTVDEAL
101: ELLVENRITG FPVIDEDWKL VGLVSDYDLL ALDSISGSGR TENSMFPEVD STWKTFNAVQ KLLSKTNGKL VGDLMTPAPL VVEEKTNLED AAKILLETKY
201: RRLPVVDSDG KLVGIITRGN VVRAALQIKR SGDRNA
101: ELLVENRITG FPVIDEDWKL VGLVSDYDLL ALDSISGSGR TENSMFPEVD STWKTFNAVQ KLLSKTNGKL VGDLMTPAPL VVEEKTNLED AAKILLETKY
201: RRLPVVDSDG KLVGIITRGN VVRAALQIKR SGDRNA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.