Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P05420_001 | Banana | cytosol | 45.19 | 78.21 |
| TraesCS5B01G159500.1 | Wheat | plastid | 65.56 | 75.64 |
| TraesCS5A01G162000.1 | Wheat | plastid | 64.81 | 74.15 |
| TraesCS5D01G166900.1 | Wheat | plastid | 62.96 | 72.96 |
| GSMUA_Achr1P26070_001 | Banana | cytosol | 42.22 | 72.15 |
| Bra011743.1-P | Field mustard | cytosol | 13.7 | 68.52 |
| CDX75630 | Canola | cytosol | 13.7 | 68.52 |
| Os09t0115500-01 | Rice | plastid | 54.44 | 64.76 |
| KXG25872 | Sorghum | plastid | 50.0 | 59.21 |
| GSMUA_Achr1P15910_001 | Banana | plastid | 49.63 | 58.52 |
| KRH28440 | Soybean | plastid | 48.89 | 57.89 |
| KRH77032 | Soybean | plastid | 48.89 | 57.89 |
| VIT_07s0031g00200.t01 | Wine grape | plastid | 52.59 | 57.72 |
| AT4G36910.1 | Thale cress | plastid | 50.0 | 57.2 |
| Solyc02g064950.2.1 | Tomato | plastid | 49.63 | 56.78 |
| Solyc02g093140.2.1 | Tomato | plastid | 48.89 | 56.41 |
| PGSC0003DMT400065493 | Potato | plastid | 49.26 | 56.36 |
| PGSC0003DMT400010303 | Potato | plastid | 48.15 | 55.56 |
| CDY62227 | Canola | plastid | 46.67 | 54.08 |
| CDY29539 | Canola | plastid | 46.67 | 54.08 |
| Bra017810.1-P | Field mustard | plastid | 46.67 | 54.08 |
| Zm00001d004354_P001 | Maize | plastid | 49.63 | 52.96 |
Protein Annotations
| Gene3D:3.10.580.10 | MapMan:35.1 | UniProt:A0A287R5Z9 | InterPro:CBS_dom | ncoils:Coil | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:HORVU5Hr1G050570 | EnsemblPlants:HORVU5Hr1G050570.1 | InterPro:IPR000644 |
| PFAM:PF00571 | PFscan:PS51371 | PANTHER:PTHR43803 | PANTHER:PTHR43803:SF1 | SMART:SM00116 | SUPFAM:SSF54631 |
| UniParc:UPI000B483579 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:394033656..394037400
Molecular Weight (calculated)
24437.7 Da
IEP (calculated)
7.510
GRAVY (calculated)
0.018
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: GLPPPPLSLS PAIISSRPLP PAPSLPFPSP PIAPALAMEA AASTXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXRAYAAPA MPAPASGNGL
101: VPNNNGVYTV GDFMTKKEDL HVVKPSTPVD EALEMLVQNR ISGFPVIDDD WKLVGVVSDY DLLALDSMAG CGLADTNSSM FPEVDSTWKT FREIQRLLSK
201: TSGKVIGDVM TPSPLVVRET TNLDAAARLL LETKYHRLPV VDSTGKLVGM ITRGNVVRAA LKIKKKAEGA
101: VPNNNGVYTV GDFMTKKEDL HVVKPSTPVD EALEMLVQNR ISGFPVIDDD WKLVGVVSDY DLLALDSMAG CGLADTNSSM FPEVDSTWKT FREIQRLLSK
201: TSGKVIGDVM TPSPLVVRET TNLDAAARLL LETKYHRLPV VDSTGKLVGM ITRGNVVRAA LKIKKKAEGA
001: MDAVLYSVPL SFTPLRASSS PSSPYLLLPR FLSVQPCHKF TFSRSFPSKS RIPSASSAAG STLMTNSSSP RSGVYTVGEF MTKKEDLHVV KPTTTVDEAL
101: ELLVENRITG FPVIDEDWKL VGLVSDYDLL ALDSISGSGR TENSMFPEVD STWKTFNAVQ KLLSKTNGKL VGDLMTPAPL VVEEKTNLED AAKILLETKY
201: RRLPVVDSDG KLVGIITRGN VVRAALQIKR SGDRNA
101: ELLVENRITG FPVIDEDWKL VGLVSDYDLL ALDSISGSGR TENSMFPEVD STWKTFNAVQ KLLSKTNGKL VGDLMTPAPL VVEEKTNLED AAKILLETKY
201: RRLPVVDSDG KLVGIITRGN VVRAALQIKR SGDRNA
Arabidopsis Description
CBSX1CBS domain-containing protein CBSX1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23193]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.