Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G288300.1 | Wheat | cytosol | 94.42 | 95.31 |
| TraesCS6A01G309000.2 | Wheat | cytosol | 93.95 | 94.84 |
| TraesCS6B01G338000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 91.16 | 92.02 |
| Os02t0742200-01 | Rice | cytosol | 89.77 | 90.19 |
| EES05544 | Sorghum | cytosol | 88.84 | 89.25 |
| Solyc03g114070.2.1 | Tomato | cytosol | 84.19 | 86.19 |
| KRH54429 | Soybean | cytosol | 26.05 | 86.15 |
| PGSC0003DMT400063229 | Potato | cytosol | 83.72 | 85.71 |
| Bra035878.1-P | Field mustard | cytosol | 80.93 | 84.88 |
| GSMUA_Achr3P06090_001 | Banana | cytosol, mitochondrion, plastid | 83.72 | 84.11 |
| VIT_17s0000g07890.t01 | Wine grape | cytosol | 81.86 | 83.81 |
| KRH57035 | Soybean | cytosol | 80.93 | 83.25 |
| AT3G48040.1 | Thale cress | cytosol | 80.47 | 83.17 |
| Bra010128.1-P | Field mustard | cytosol | 80.47 | 83.17 |
| AT5G62880.1 | Thale cress | cytosol | 81.86 | 81.86 |
| CDY30738 | Canola | cytosol | 81.4 | 81.4 |
| Bra029240.1-P | Field mustard | cytosol | 81.4 | 81.4 |
| CDY56740 | Canola | cytosol | 80.93 | 80.56 |
| CDY00332 | Canola | cytosol | 80.47 | 80.47 |
| CDY45748 | Canola | cytosol | 79.53 | 80.28 |
| HORVU6Hr1G095230.1 | Barley | cytosol | 73.49 | 80.2 |
| GSMUA_Achr2P00650_001 | Banana | cytosol | 79.07 | 79.81 |
| PGSC0003DMT400063227 | Potato | cytosol | 59.07 | 79.38 |
| KRH63489 | Soybean | cytosol | 78.14 | 79.25 |
| CDY68200 | Canola | cytosol | 65.12 | 77.35 |
| KRH54430 | Soybean | cytosol | 51.16 | 75.34 |
| Zm00001d052273_P004 | Maize | plastid | 74.42 | 73.73 |
| HORVU1Hr1G076880.4 | Barley | cytosol | 71.63 | 70.64 |
| HORVU7Hr1G038980.5 | Barley | cytosol | 81.86 | 70.4 |
| KRH03338 | Soybean | cytosol, plastid | 80.93 | 68.5 |
| HORVU2Hr1G076740.1 | Barley | cytosol | 17.67 | 59.38 |
| HORVU6Hr1G012690.3 | Barley | plastid | 74.88 | 56.89 |
| HORVU3Hr1G050740.1 | Barley | cytosol | 33.02 | 55.04 |
| HORVU3Hr1G050750.1 | Barley | cytosol, plasma membrane, plastid | 20.0 | 47.25 |
| Zm00001d018004_P002 | Maize | cytosol, peroxisome, plastid | 89.3 | 37.94 |
| HORVU3Hr1G052560.3 | Barley | cytosol | 49.3 | 35.69 |
Protein Annotations
| MapMan:27.4.1 | Gene3D:3.40.50.300 | UniProt:A0A287UR86 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 |
| EnsemblPlantsGene:HORVU6Hr1G076210 | EnsemblPlants:HORVU6Hr1G076210.5 | InterPro:IPR003578 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51420 | PANTHER:PTHR24072 | PANTHER:PTHR24072:SF174 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | InterPro:Small_GTPase_Rho | TIGRFAMs:TIGR00231 | UniParc:UPI000B486E41 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:524728958..524731027
Molecular Weight (calculated)
24004.1 Da
IEP (calculated)
9.597
GRAVY (calculated)
-0.226
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSASRFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV ADGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLV SRASYENIMK
101: KWIPELQHYA PGVPVVLVGT KLDLREDKHY LLDHPGMIPV TTAQGEELRK QVGALYYIEC SSKTQQNVKA VFDAAIKVVI QPPTKQREKK KKKQRRGCSM
201: IYHFGHKHAL QNAAL
101: KWIPELQHYA PGVPVVLVGT KLDLREDKHY LLDHPGMIPV TTAQGEELRK QVGALYYIEC SSKTQQNVKA VFDAAIKVVI QPPTKQREKK KKKQRRGCSM
201: IYHFGHKHAL QNAAL
001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLSFSLV SRASYENVFK
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQVYEA ASLCYSFLRI NKAMKFIYCR M
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQVYEA ASLCYSFLRI NKAMKFIYCR M
Arabidopsis Description
ARAC10ROP11 [Source:UniProtKB/TrEMBL;Acc:A0A178UC00]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.